BGIOSGA037403

From RiceWiki
Revision as of 08:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037403| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037403, complete gene.| tag = OsI_383...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037403

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037403, complete gene.

LocusTag

OsI_38353

Ensembl Transcript ID

BGIOSGA037403-TA

Ensembl Protein ID

BGIOSGA037403-PA

Length

4095

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:14508140..14512234

Sequence Coding Region

14508140..14508218,14508551..14508773,14509034..14509160,14509268..14509495,14510884..14511030
,14511290..14511345,14511808..14512234

Genome Context

<gbrowseImage1> name=IndicaChromosome12:14508140..14512234 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:14508140..14512234 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTGTGGATTCGAAAGAAAAGTTGCTTTGCTTCGAGTATCTACGTAATGGAAGCCTTCGCAGTCATCTTGATACTGCCGGATCTTGTGTGCTTCAATGGCAGATTTGTTACCAAATAATCAAAGGTATTTGCCTGGGTTTGCACTATCTGCATGAGAGGAAGATAATTCATCTAGATCTCAAACCAGATAACGTACTGCTCGATGACAGTATGGTGCCTAAAATTGCGGATTTTGGTTTGTCAAGGCTCTTGAGTGAAGAAAAAAGCCGCATGGTCACTGAGAGAATTTTTGGAACAAGGAGATACATGGCACCCGAATACTTAGTTAATGGAGATATCACAGTCAAGTCAGATATATACAGCTTGGGTTTGATAATCAGAGAGATGGTGATGGGTCCTAATAATGAAGGAACAACGACAGAAAATGTACTAGAAATCTGGAGGCATAGGTTGGAACAGGATTCATCAAAGATGAGGCAGACGCCAATCGAAATGCGTTACCGGCAAATAATAGAAGCGTGCATTGAGATATCAGAGACATGCATAGCGGGTAAACCAGATAAGAGGCCAACCACAGGGGATATCCTTCGTCGGCTTGAGAAAGAGGAAGCAGGGAATTGGTCTATCGTCCCAGTTACTCCAGTTGTAGATTGGATAAGCTCGCTATCCAGGTTGATGGAGAGCATAAAGCGAATGGCTGTAACTTCACCCGAACCGCGAACAATTCGAGGTGAGGAGTCCAAAGCGTTGCAATTGCAACCTGGGCCTTCTCAGCCAGGGGACAGGAGACCAGCTGATAAGGTTACATGGGGAGAAAGCCCCGAGCACTGGAAATGGATCACCCTCCCCGATTCTAGGTTTGCCGAATGCGCGGAGCTCCTAAACGTGTACTGGCTGGCGGTGATTGGGGAGATCGCAACGGAGGACCTGACGCCGGGTACTCGCTACGCGGTGTACCTGGTGTACAAGCTGACGGGCACCGCCGTCGGCCTGAGAGGTGGCCAGACGCAGAGGTCATCGCTCAGGCTCTACGGCGAGATCACCGTCTCCACCGGCAAGGTCAGCGTCGACGTCGTCCCTGCAGCGGCGCGCGGAATGGCCGCCGGGGTGGCCTATCCTGTGGCCAGGGGAGACGGCTGGATGGAGCTCAAGCTGGCCGAGTTTGCTGCCGACGAGAAGCTGCTCGGTGAGAAGAAGGTGATAGTGGACTTCCGCGAGGAGAACGACCATGTCAAGAAGAGTGGTCTTGTTATAGAGGGCATGGAGTTCAGGCCCAACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MFVDSKEKLLCFEYLRNGSLRSHLDTAGSCVLQWQICYQIIKGICLGLHYLHERKIIHLDLKPDNVLLDDSMVPKIADFGLSRLLSEEKSRMVTERIFGTRRYMAPEYLVNGDITVKSDIYSLGLIIREMVMGPNNEGTTTENVLEIWRHRLEQDSSKMRQTPIEMRYRQIIEACIEISETCIAGKPDKRPTTGDILRRLEKEEAGNWSIVPVTPVVDWISSLSRLMESIKRMAVTSPEPRTIRGEESKALQLQPGPSQPGDRRPADKVTWGESPEHWKWITLPDSRFAECAELLNVYWLAVIGEIATEDLTPGTRYAVYLVYKLTGTAVGLRGGQTQRSSLRLYGEITVSTGKVSVDVVPAAARGMAAGVAYPVARGDGWMELKLAEFAADEKLLGEKKVIVDFREENDHVKKSGLVIEGMEFRPNK</aaseq>

Gene Sequence

<dnaseqindica>1..79#412..634#895..1021#1129..1356#2745..2891#3151..3206#3669..4095#ATGTTTGTGGATTCGAAAGAAAAGTTGCTTTGCTTCGAGTATCTACGTAATGGAAGCCTTCGCAGTCATCTTGATACTGGTATAACTATATGTGATCCATTTGCTCCATTTATGATGTTCATTCTGAGTAAAAATATTTACATTGTGGAAAAAGTAATAGAAAACCACTAGTGTATCGGTAAATACAACATAGTAATAAGAGGTTTGTTGACCTAAAATTGTGCAAATATAATTAACTCCAAATTTGAGTTGCGGGCAAAATTATGGTATCTACATGGCCAGCCACCACTATATATTGTAATGGTCATATATTCGAAGTGCATGGCAATGGTGTGCCAAAATAAAAGGCATTATGAATAATTTTGCAATTTATACTACAAGGCTATGATGTACTATTTATTTGTCGTACAGCCGGATCTTGTGTGCTTCAATGGCAGATTTGTTACCAAATAATCAAAGGTATTTGCCTGGGTTTGCACTATCTGCATGAGAGGAAGATAATTCATCTAGATCTCAAACCAGATAACGTACTGCTCGATGACAGTATGGTGCCTAAAATTGCGGATTTTGGTTTGTCAAGGCTCTTGAGTGAAGAAAAAAGCCGCATGGTCACTGAGAGAATTTTTGGAACAAGGTTAGTCAAGTATGTGTGTGTGTATATATATATATATATGTGTGTTTATATACATATGTATACATGTATATGTATACACGTATATATATACATACGTATATACGTATACATGTATACATATGTATATATATATATACACACATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTCATATATCTTTGTAAATGAGTTTTCCCGTGGATCCGCTTTCCTTGGACCTGAGATTACAGGTGTCCATTGATGCAGGAGATACATGGCACCCGAATACTTAGTTAATGGAGATATCACAGTCAAGTCAGATATATACAGCTTGGGTTTGATAATCAGAGAGATGGTGATGGGTCCTAATAATGAAGGAACAACGACAGAAAATGTATATTCAAGAAGAAATAATTAATAATCAGTACTACATTTTAGATTGTTTGAGTTAATACTACTACGTGTGTAACTTTTTGCTAATGAAATTGAATTGCTTGTCAGGTACTAGAAATCTGGAGGCATAGGTTGGAACAGGATTCATCAAAGATGAGGCAGACGCCAATCGAAATGCGTTACCGGCAAATAATAGAAGCGTGCATTGAGATATCAGAGACATGCATAGCGGGTAAACCAGATAAGAGGCCAACCACAGGGGATATCCTTCGTCGGCTTGAGAAAGAGGAAGCAGGGAATTGGTCTATCGTCCCAGTTACTCCAGTTGTAGATTGGGTATAAATAAATCATCTCTTACTATAAAATTATTTTATAGATCACTAATTCCTAAAATTTAACATGCAAACATATCATATCATAATCAACTAATAATTATTACATCAACTAATAATTATAATAATTATAGTCGATATACCGAGTTTTTATTGCAAACCCCCAAGATATTATTACTACAGACTAAGGATAACACATTTAAACATCATGCTACATGCATGGCTATATTATTATAATTTATTGAATCTAATAGTTTTAGAGATGTTAAAATGTAAACTTGTCAAATCATCTTACATAATTCGCATAATGTTTCAGTATTTCTCTCCATTATTTTTCTATAATATCCTATATACCTATATAGTTCATCCTTATTTAGTTTATGATATTTTTCTTTTTTCATTAGGTCATAGCACATCAATTATTTTTAGTCCTTAGATGATTAATTTATGGTTCAAATTATCTCTTTTCTTTTCTTCTCTCATTGAGTTATATTATCTCAATTTTTTTAGCACTTAGATGTATGGTCTAAATTATCTTCTTTTGTTTCCTCATAAAGTAACATCATCTTACTTTTATATTTGGATCATCATTCTATATACTATTTAAATTTAATTCACATTAACTTACCTAAACTTATGTTTATTTAAGATTATGTTGTTTAAACTATCTCACACATTTTTTTACTCATTTTTATCATAGTAAATTTCACAACAGCGTAAGGGATTTCATCTAGTATGCATATATACTATCATGTCGCTTGAACAGTACATCTTTCATTCAAAGATTCACCAAGTACATCCAAAAAGCTTTAGATGATGACGAGTATACTGAAAAGTAATTACCGTGAGCCCGAATGTTTGGCTAATATAAGTACTCCCTCTGTACCAAAATAAACGTAACCTTCCGCATATAACTTTAATCGTTCGTCTTATTTATTTTTTTTAAAAAAATAAAAAGCATAAGTCAAGTATAAAATACTATTCATGTTTTATAATCTAATAACAATAAAAATACTAATCATAAATTTTTTTAAATAAGACGGATGATAAAAGTTGGACACGGAAACTCATGGCTACGCTTAGGGGCTGTTTGGATGGGGGACTAATCTTTAGTACCTGTCACATCAGATGTTTGGACACTGATTAGAAGTATTAAACATAGACTAATGACAAAACTCATTTCATAACTCTGGAATAATTCGCGAGAGGAATTTGTTGAGTCTAATTAATGTAATTCACTGGGAGTGCCAAGCATAGACACAGGCAAATAAGGGAAAGGGATGTCTTAACTGAAAACAGAGAAAGACAAAAAAACTAACAATAGGCTCTTTCATTGCCGATCATTTACTTCGAATGGTTCTGTGATTAGATTTTATTTTGCTTCCGTGGCAGATAAGCTCGCTATCCAGGTTGATGGAGAGCATAAAGCGAATGGCTGTAACTTCACCCGAACCGCGAACAATTCGAGGTGAGGAGTCCAAAGCGTTGCAATTGCAACCTGGGCCTTCTCAGCCAGGGGACAGGAGACCAGCTGATAAGGTAAATGAAGAAACAAAAGCCCAAATAAATATTAATAAATTGATTTATTAACATTTATATAAATATAGGCAATACTAGAAATTCTTATATTGTAAAACGGAGGGAGTAGCACTGACAGACATTTACAGAATCTACTGTGGATTATACTTGGTACCGAACAATCCAAATTTTTATATTGGTTGACGAACGCATGTTGAGTTTTTGGTTGGATGCTACAAGCAACGCCAAGTGCTACATGCTATCATCGAGATTATTAAAGGTTACATGGGGAGAAAGCCCCGAGCACTGGAAATGGATCACCCTCCCCGATTCTAGGTAAGGTTTCCATACTGAGCAAACTTTCAAATCCCTACATTTCATATTATAAGTCTTTGACTATTTTCTTACTGAAAGTACTTTAAATTTGCCCAAGTTTATAGTAAAATATAATAATACTTTTAATATAAAGCAAATATTGTATCAAAATATATTTGATGCTAAATTTAACGGAACTAATTTGGTATCATAAATGTTGCTAATTTTTTCTATAACTTTGGTCAAAATTAAAGAAACTTTGAGTTAAAAAAAATTAAATGACTTATAATATGAATTGAAATGGAAGGTTTATTTTCTCCGTTGGAACAAAGGTCTATTTTCCAAATCCATGAAACAGGCACATGTATATTAATTTGTTTTGTTTTCTCTGCTGGTAAAATACAAAGGCTTGTTAATTTCCAAATCCTGAAAACATGCACATATTAATTTTTTGTGTTTTATTTTTCCTCTGTTGGTACAAAGGTTTGCCGAATGCGCGGAGCTCCTAAACGTGTACTGGCTGGCGGTGATTGGGGAGATCGCAACGGAGGACCTGACGCCGGGTACTCGCTACGCGGTGTACCTGGTGTACAAGCTGACGGGCACCGCCGTCGGCCTGAGAGGTGGCCAGACGCAGAGGTCATCGCTCAGGCTCTACGGCGAGATCACCGTCTCCACCGGCAAGGTCAGCGTCGACGTCGTCCCTGCAGCGGCGCGCGGAATGGCCGCCGGGGTGGCCTATCCTGTGGCCAGGGGAGACGGCTGGATGGAGCTCAAGCTGGCCGAGTTTGCTGCCGACGAGAAGCTGCTCGGTGAGAAGAAGGTGATAGTGGACTTCCGCGAGGAGAACGACCATGTCAAGAAGAGTGGTCTTGTTATAGAGGGCATGGAGTTCAGGCCCAACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037403