Os12g0205500

From RiceWiki
Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0205500| Description = Disease resistance protein family protein| Version = NM_001072914.1 GI:115487789 GeneID:4351749| Length = 6208 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0205500

Description

Disease resistance protein family protein

Version

NM_001072914.1 GI:115487789 GeneID:4351749

Length

6208 bp

Definition

Oryza sativa Japonica Group Os12g0205500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5507843..5514050

Sequence Coding Region

5507988..5509700,5512897..5514003

Expression

GEO Profiles:Os12g0205500

Genome Context

<gbrowseImage1> name=NC_008405:5507843..5514050 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5507843..5514050 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtccgcttggaccatcgtccccggcatcatcgtttcgctgatcgtgcttgtggtcaccaagctgtgggatccaatcgcccaggtctacgggtacccgttcgatgcggaaaggcgcgtgcagaaactcgtcgatgagttctccaagctgcaagatcagttgggcgagctggggattttggatcccaaaccctcgtccgcagtgctctcgggttggctgcagcgggcggctggatgcaaggacaaggtggaggagataaagcgccgacatgaatctgtgaagagcgtgggggtccagggcctcctaccccggatcaacgtggtccggcacctctgcgccatcggcagggatgcagatctggagctagaagaagtcaaggatctcatcgccaaaggagagggccacttgaaggaggcgggtgctgctccccatccgattccgattccgattcctctactacctccaccggcggcagaattcgacaacggccagcttgcccagtcaatcctcgacacggcagcggccggcacatggggagttgggatccaggcaatgaaacctcacctgaccagcgtcctagattttgtccgggaagacggcggcggagctcctggcgtgctaggagtatggggcatgggcggcgccggcaaaaccacgcttctcaagctcgcgcgcgatccacgagtacaaaccttggaccatattgttctcgctgaggctggcaagtgctgcgatatcgccaagcttcaggacagcattgcacagggcacgagcctggtgttgcctccttcgctcagtgtcaccaaccgtgctaccgtcctgtgcaaccatcttcgcaacaagaaattcttgctgctgctggatgacctgtggaactacattgatttggaggctgtcggcatcccgttgccccttggacgggggaatcaacgtaaggttgtattgacatcacgaagcgaggccgtatgtgtcagcatggcacgccaaggagttaccatcagaatggggtgcctagatcaacaagatgcgttcaagctcttcgaggataaagttgggagtgctaccatcaatgctgatactaggattccagagcttgccaggcaggtagccgaaatgtgcggtggtctgccattagtgctgtgcgtcatcggtcgatccatgtgcacgaagaagaattataagctgtgggtggatgcagtcaacaggttggagaagtcaaaggtccataataacctagttggagacgatgatatattcaacatcctaaggtacagcttcgatggactacatgacgacgaagcacggggttgttttctggcgtgcaccctgttccctccattttacattgagaagaagcgactcatccggtggtgtatggggcttggtttcttggatcccgccaacggttttgaaggaggagagtctgtcatcgattccctgcagggagcatcgctcctggagagcgctggaagctattctgttgatatgcacgacatcatccgcgacatggcgctgtggattgtaaggggccctggaggtgagaagtggagcgtgctgaatcgagcatgggtgcaggatgcaaccatacgcaaaatgaacaacgggtattggactcgggaagaatggcctcccaaggatacatggcctgagcttgagatgcttgcgatggaaagcaatcgctcctaccttgatccgtggaaggtttcgtccatcggccagatgacaaacatcagctttctggaactggtgtctttagatacatttccaatggagatctgtgagctgcataagctcgaatacctctgcatcaaagcagggagtatgtctaggctgccaattgaactcgggaaactgtcgaaactcaagcaattgcatctgcggcagtcttgcagtcttggcgagataccgacaggattgatctcgcagctcgtaaacctgcaggtgctggaccttttctgcagcagcatcgattatccctaccgtccaaaatctgctgctggtggcctttacaattttctgggtgaactggccgaagctagagcatcggagaagttgaagattcttgggatttgcctggatgcgacgcgtgataatagggcatttctgaagcagttgatgcagaagcaagtgcgaataaggtcgctctgcttaagcttcatcaatccaatctcgcctggacatgatcaaccccagccggccaccagcagatacatgatcgccgaactgcaaccgttctccaatgatctgggagaactagccatttctagttccgacatcttgcaggagcttgtggccacgtctgatggaaaggagctgatccaaaacctggaacatctctgcttggaaaatctcaatgtactggagagagtaatatggctgaacgcggcgagaaaccttcgaagggttgacatcaagaaatgtgcaaaattgacgcacgccacatgggtattgcagcttgggtacctcgaggaactcggcattcatgattgcccacagtttaaacggttgatcgaccataaggagcttgcggagaatccaccagatcatgtgatcttccctcggcttacatatctcgatctcagtgatctgccagaattgtctgatatatgtgtgctgccttgtgaatttaagtcgtcgctggcgcttcttgttgagaactgcgacaagctgatgaacatatcgttccactacccacccggtcatgaccagaaaaatattagggttttctgcgacaatgaatggttcaatagactcgagtgcaagccaaatatcatgaagtcctacctatcgcaaaacatgagattttctgctatttga</cdnaseq>

Protein Sequence

<aaseq>MVSAWTIVPGIIVSLIVLVVTKLWDPIAQVYGYPFDAERRVQKL VDEFSKLQDQLGELGILDPKPSSAVLSGWLQRAAGCKDKVEEIKRRHESVKSVGVQGL LPRINVVRHLCAIGRDADLELEEVKDLIAKGEGHLKEAGAAPHPIPIPIPLLPPPAAE FDNGQLAQSILDTAAAGTWGVGIQAMKPHLTSVLDFVREDGGGAPGVLGVWGMGGAGK TTLLKLARDPRVQTLDHIVLAEAGKCCDIAKLQDSIAQGTSLVLPPSLSVTNRATVLC NHLRNKKFLLLLDDLWNYIDLEAVGIPLPLGRGNQRKVVLTSRSEAVCVSMARQGVTI RMGCLDQQDAFKLFEDKVGSATINADTRIPELARQVAEMCGGLPLVLCVIGRSMCTKK NYKLWVDAVNRLEKSKVHNNLVGDDDIFNILRYSFDGLHDDEARGCFLACTLFPPFYI EKKRLIRWCMGLGFLDPANGFEGGESVIDSLQGASLLESAGSYSVDMHDIIRDMALWI VRGPGGEKWSVLNRAWVQDATIRKMNNGYWTREEWPPKDTWPELEMLAMESNRSYLDP WKVSSIGQMTNISFLELVSLDTFPMEICELHKLEYLCIKAGSMSRLPIELGKLSKLKQ LHLRQSCSLGEIPTGLISQLVNLQVLDLFCSSIDYPYRPKSAAGGLYNFLGELAEARA SEKLKILGICLDATRDNRAFLKQLMQKQVRIRSLCLSFINPISPGHDQPQPATSRYMI AELQPFSNDLGELAISSSDILQELVATSDGKELIQNLEHLCLENLNVLERVIWLNAAR NLRRVDIKKCAKLTHATWVLQLGYLEELGIHDCPQFKRLIDHKELAENPPDHVIFPRL TYLDLSDLPELSDICVLPCEFKSSLALLVENCDKLMNISFHYPPGHDQKNIRVFCDNE WFNRLECKPNIMKSYLSQNMRFSAI</aaseq>

Gene Sequence

<dnaseqindica>4351..6063#48..1154#gacggtagagtcagacgaccaccagcaaaaccagagaaaagaggatcatggtgtccgcttggaccatcgtccccggcatcatcgtttcgctgatcgtgcttgtggtcaccaagctgtgggatccaatcgcccaggtctacgggtacccgttcgatgcggaaaggcgcgtgcagaaactcgtcgatgagttctccaagctgcaagatcagttgggcgagctggggattttggatcccaaaccctcgtccgcagtgctctcgggttggctgcagcgggcggctggatgcaaggacaaggtggaggagataaagcgccgacatgaatctgtgaagagcgtgggggtccagggcctcctaccccggatcaacgtggtccggcacctctgcgccatcggcagggatgcagatctggagctagaagaagtcaaggatctcatcgccaaaggagagggccacttgaaggaggcgggtgctgctccccatccgattccgattccgattcctctactacctccaccggcggcagaattcgacaacggccagcttgcccagtcaatcctcgacacggcagcggccggcacatggggagttgggatccaggcaatgaaacctcacctgaccagcgtcctagattttgtccgggaagacggcggcggagctcctggcgtgctaggagtatggggcatgggcggcgccggcaaaaccacgcttctcaagctcgcgcgcgatccacgagtacaaaccttggaccatattgttctcgctgaggctggcaagtgctgcgatatcgccaagcttcaggacagcattgcacagggcacgagcctggtgttgcctccttcgctcagtgtcaccaaccgtgctaccgtcctgtgcaaccatcttcgcaacaagaaattcttgctgctgctggatgacctgtggaactacattgatttggaggctgtcggcatcccgttgccccttggacgggggaatcaacgtaaggttgtattgacatcacgaagcgaggccgtatgtgtcagcatggcacgccaaggagttaccatcagaatggggtgcctagatcaacaagatgcgttcaagctcttcgaggataaagttgggagtgctaccatcaatgctgatactaggattccagagcttgccaggcaggtaatgaaatattccttattctacttgtttttagtctagtttgtgccccgttacaatttgcttaatatggaaaattaatattcacctattaggttccattgatttcatgaagctttttctgtacttttataatttacaagtcatgacttcaacaatccacaaatattatatacacacaggtgcgtttttaataggattttagtgaggtaaggaattcgaagcatgtgcgtgcgtagttctaaagatgacaaaagctaagcaaggcgaccaccattttcagacgcccatttaacctatggaatgtcaccaactttatacttgttgctgccaactcttgactcttgagaccatgtgccacattccctaaggagaaccaaagcagggagggattgcttcccctaatcccactcttgaaaccctttgtggtttgcagcccctaatcccactcttcaaactatgtgttcgttttggctgggattcagcgtattggcttctgaaagagtacagtcctataatctgtctgaaaaatgtgtagtcctataatttcattcactggttctaaattcacagcttaggttgaagttgaactcaacgaacaagaacaaattcccaagagagtattacaaatatgaaggtcccaaattcacagattggtgacaagtaaaatctgtaaaacaatacaatctcattccactgaaatgtattggtatcaaggttaaaggagaaacccaatttcaaacagatggtagatacatagcctgagcactagatccaacacctacaaatacaaatgctcataattgaaatctgaaacctacttatgccacgcaagacattagacgatcagataatgagacaatggcacaactcttcaggccatcacctagtaccaaagatagaagccaatgaatccaaaccctaaaatacatttagacaaaacaacttggtagtgttaggtatacataaaggcactgaacaaacattctgaaatagatatgggcatggatccatcatgtttaactgcacaaaatgttcaggttgtagtcagtagttgagcacaattttgcactgatatgaagcccacaatctctgattgttccatgaagcacccatgtcatgtctgaaactcattggcatgcattatctcatattctcatttcatcagatagaaacatttttcagcacggtgcacagaacaaaagcagtagtctgggaggcgtgtgcactgcagcgtggccgccacgccgcatattggtgcaccgacgcccgccactgctgttgcggtggtaaattcttaattgtcacattttaaaagtggcaaataattaaatgccccttgcactcctgttggtaagatgatatttttccaggtgagggtagcctgcttagggcgttcacagtgtgtccctcatatttgttgttcctcacatgcccacctagacgaacgaggaacgtgttaagccacatgttccacagtgcaagtttcttgtagtgggtcccaccaataccatctctttttacttttcatcttcccctctctctctttctttcttctttaccttttcatcttcccctcccatctgtctcctctctttttcttcccccaccggcaaatccgaggctggagaaagcgagcgccggggcggagcggcggccggtggggtggtccatgcggcaacagcgccggctccgaattggcgttggctcgaccttgtgctgagctcctctgcctctccgtcggctccctctccccttctcttctcctccgccgcgcctccccccctcctccggccgccatgcctctgctcctcctccggacgcggcggctcagaatggggtggacggggcgaggtggcacttaaggcggctcagcggtagattgatgacggatccgtcctcgtcttcctcgcctctccactgccctgccctctccgcgatgaggtcagggtggcgcggtccagcgttgagcagagtaggggctccccggcgccggcgcggtctagtgtcgagcggagtaagggctcccagtggcagcgtggactagcgagcttccccatcgagccggcgagcgcccgacaactctcctcccctggccgacaagctcagcggcatggagcatggtgatggtcaacgacagtgtggagcgcggggatgatcgacgacggcaacgaggtctctctcctccatctcccttccctaacgacgcgttgctcgagtgtgggccccacctacaaaactgacgaggaaccagtggctcaaattggtctgcggtcttgagcaggctgcgcggtttgcgtccttggctaagaatattcggtttttgttgttgaggctgaatgccacattggtgcactgtaatcccgactagataaccgaacgcaaacttttgcatgcatgggccaggaccaggattctttccggctggggttgatccctgccttccctggcctaagcaaacaaggccttacaaagcagagcagagaagtgaagcaggatgggagaggagggaataggtactgtttgcaaaccagagaagatcagcagaggtcccttcaccaaactccaaagcaccagcagagtgcaaagaagcatatatatatatatatatatatatatatatatatatatatatagcacactagaagaagacagagacagaggaagagatacctgtcctgggctgagcatgaaggacgtgcacataggagaaaaaggggtggcagggaggtaggcaggcagccgttgctgtccgcgtgctgctctgcattttttcttttcctctctctctctctctctccctctccctctccctctgtcttctctccaattcttgcgcagggccaatgggccatgcgctcgcgtttcccccatgtagtacgtgcacggcgcacccattcctctgctcgatttcacgttatttcaacaatatcgaagtgcgtggtagtcgtgacaaccgtgatctccgcatatgcgtcttccatataacaccccccccaaaaaaaaagacataactagattcatgcagtttcctataaattttaaaattgaagactggttatagctggttttagaatttaaattttctcctaggtctggtaatttaatcctcatctcacacacatactacatatgtattccactggtttttgtgctaacttacttacatggatactactattactactacattaatcaggtagccgaaatgtgcggtggtctgccattagtgctgtgcgtcatcggtcgatccatgtgcacgaagaagaattataagctgtgggtggatgcagtcaacaggttggagaagtcaaaggtccataataacctagttggagacgatgatatattcaacatcctaaggtacagcttcgatggactacatgacgacgaagcacggggttgttttctggcgtgcaccctgttccctccattttacattgagaagaagcgactcatccggtggtgtatggggcttggtttcttggatcccgccaacggttttgaaggaggagagtctgtcatcgattccctgcagggagcatcgctcctggagagcgctggaagctattctgttgatatgcacgacatcatccgcgacatggcgctgtggattgtaaggggccctggaggtgagaagtggagcgtgctgaatcgagcatgggtgcaggatgcaaccatacgcaaaatgaacaacgggtattggactcgggaagaatggcctcccaaggatacatggcctgagcttgagatgcttgcgatggaaagcaatcgctcctaccttgatccgtggaaggtttcgtccatcggccagatgacaaacatcagctttctggaactggtgtctttagatacatttccaatggagatctgtgagctgcataagctcgaatacctctgcatcaaagcagggagtatgtctaggctgccaattgaactcgggaaactgtcgaaactcaagcaattgcatctgcggcagtcttgcagtcttggcgagataccgacaggattgatctcgcagctcgtaaacctgcaggtgctggaccttttctgcagcagcatcgattatccctaccgtccaaaatctgctgctggtggcctttacaattttctgggtgaactggccgaagctagagcatcggagaagttgaagattcttgggatttgcctggatgcgacgcgtgataatagggcatttctgaagcagttgatgcagaagcaagtgcgaataaggtcgctctgcttaagcttcatcaatccaatctcgcctggacatgatcaaccccagccggccaccagcagatacatgatcgccgaactgcaaccgttctccaatgatctgggagaactagccatttctagttccgacatcttgcaggagcttgtggccacgtctgatggaaaggagctgatccaaaacctggaacatctctgcttggaaaatctcaatgtactggagagagtaatatggctgaacgcggcgagaaaccttcgaagggttgacatcaagaaatgtgcaaaattgacgcacgccacatgggtattgcagcttgggtacctcgaggaactcggcattcatgattgcccacagtttaaacggttgatcgaccataaggagcttgcggagaatccaccagatcatgtgatcttccctcggcttacatatctcgatctcagtgatctgccagaattgtctgatatatgtgtgctgccttgtgaatttaagtcgtcgctggcgcttcttgttgagaactgcgacaagctgatgaacatatcgttccactacccacccggtcatgaccagaaaaatattagggttttctgcgacaatgaatggttcaatagactcgagtgcaagccaaatatcatgaagtcctacctatcgcaaaacatgagattttctgctatttgaagattgttttatctgtacagctgaaaatttgttatttctctcgtggtgtgatctggcagcaagatgcccacgagcattctatactatacgtacgataccagggtaacaaactattaggactcgagagcattcttttgtttgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0205500, RefSeq:Os12g0205500