BGIOSGA037451

From RiceWiki
Revision as of 08:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037451| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037451, complete gene.| tag = OsI_384...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037451

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037451, complete gene.

LocusTag

OsI_38455

Ensembl Transcript ID

BGIOSGA037451-TA

Ensembl Protein ID

BGIOSGA037451-PA

Length

1387

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15619928..15621314

Sequence Coding Region

15619928..15619930,15619983..15620186,15620291..15620344,15620427..15620486,15620737..15620836
,15620915..15621012,15621129..15621314

Genome Context

<gbrowseImage1> name=IndicaChromosome12:15619928..15621314 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:15619928..15621314 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCATCAAATCCTGTGTTTGCCACTGGCATTAGATTTGGTGGTTTTGTGATGGGAGGCTCCTCAATTGGGGAGGGAACTCTGTCTCTCGGTGACTTCGTTGCGTCTGCAAAGGCCCTGATTGAGAAGTGGAAGGTGATTGATGTAGAAGATTCTCTTCCTGATTGGCAATGGAAACCGTGTGGCAAGACGGGGGTTCCATCTGAGGAAGAGGGCTACCTAGCTCTCGAAGGAGTATACCGCAATCCTGGAGGAAGGCATGAACAAATTGGGGATAGCAGTAATTTCGATGATGCGGACATTGTCAGCGATGATGCTTGGGCCCAGAGCTCTAGTGAGAGTGTTCATATTTATGATTACCATGTTGTCTATAGTTTTTCTTACAAGGTTCCAGTGCTATACTTTCAGGGTCATCAGGCTGGTGGCCAGCTGCTAACTCTAGATGAGATAAAAGAGGACCTTCCTTCTCACTCACTTAAATTATTAGGTGAATCGAAGTGGACATTTATTACTCGGGAGGAGCATCCCCATTTTAGTAGGCCATGGTTCACTTTGCATCCCTGTGGAACCAGTGACTGTATGAAGTTACTTCTTGAAGGAGTGGAAAACAAGGATCAACATGTGCAATACTTACCGGCATGGCTATCTGTGGTTGGCCAGGCAGTAGGACTAAAAATCCCACTTGAGCTTTATGGTAATCTATAA</cdnaseq>

Protein Sequence

<aaseq>MPSNPVFATGIRFGGFVMGGSSIGEGTLSLGDFVASAKALIEKWKVIDVEDSLPDWQWKPCGKTGVPSEEEGYLALEGVYRNPGGRHEQIGDSSNFDDADIVSDDAWAQSSSESVHIYDYHVVYSFSYKVPVLYFQGHQAGGQLLTLDEIKEDLPSHSLKLLGESKWTFITREEHPHFSRPWFTLHPCGTSDCMKLLLEGVENKDQHVQYLPAWLSVVGQAVGLKIPLELYGNL</aaseq>

Gene Sequence

<dnaseqindica>1..3#56..259#364..417#500..559#810..909#988..1085#1202..1387#ATGGTGCTATCAACTTTTAATCTCATGACTAACAATATTTTCTGTCAATACGTAGCCATCAAATCCTGTGTTTGCCACTGGCATTAGATTTGGTGGTTTTGTGATGGGAGGCTCCTCAATTGGGGAGGGAACTCTGTCTCTCGGTGACTTCGTTGCGTCTGCAAAGGCCCTGATTGAGAAGTGGAAGGTGATTGATGTAGAAGATTCTCTTCCTGATTGGCAATGGAAACCGTGTGGCAAGACGGGGGTTCCATCTGAGGTTGTGCTATCAGATGCATGAGCATTACTCTCTTTTTCCTTTTTTCAGATTAATTTTACTTAAAAGATGGCGAATGCCGATATGCTTGCTTGTCCTTTATGCAGGAAGAGGGCTACCTAGCTCTCGAAGGAGTATACCGCAATCCTGGAGGAAGGCATGTTAGTATCGTCCTCGTGTACTTACATGTATTACAAGTAATATGAGCTTCCAAATTAGTGTTGACTTGAAATTTTCCTCTAGGAACAAATTGGGGATAGCAGTAATTTCGATGATGCGGACATTGTCAGCGATGATGCTTGGGTAACTTTTCAGTACACATTGTTCATTTTATGTTTCTGCTACCTGCTTATTGATGGTGCCTAGGTACTTTCTCTTACCCTCTGCAATTTGCATATATTCGGAATATTTTTCCTATAAGAGAAGATACCAAATAGCTGGCATAACGCAGTCATTTGAATTGATAACTTACTCAGAAACAACTGAAATAACTTTTGATCTCTAAATTCTCATATGTTCAATACTAACATTTATGATTTCCTTCTCTTTGCAGGCCCAGAGCTCTAGTGAGAGTGTTCATATTTATGATTACCATGTTGTCTATAGTTTTTCTTACAAGGTTCCAGTGCTATACTTTCAGGGTCATCAGGCTGGTATGCATATTACAGAACAAAAGTGAATATGTCATTCCTTTAGTGTTCTGTTGACAGACATCTCCAACTTATTCTTAGGTGGCCAGCTGCTAACTCTAGATGAGATAAAAGAGGACCTTCCTTCTCACTCACTTAAATTATTAGGTGAATCGAAGTGGACATTTATTACTCGGGAGGTACAAGTGGTTATACACTTCCCTTGATTGATATATTCTGTGTACCTTTTGTTGGAAAGTTTTATACTCCCTAACACTTGTTGTCTATAGTTGAACTGTGCTTACACCCCCTGCAGGAGCATCCCCATTTTAGTAGGCCATGGTTCACTTTGCATCCCTGTGGAACCAGTGACTGTATGAAGTTACTTCTTGAAGGAGTGGAAAACAAGGATCAACATGTGCAATACTTACCGGCATGGCTATCTGTGGTTGGCCAGGCAGTAGGACTAAAAATCCCACTTGAGCTTTATGGTAATCTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037451