BGIOSGA037469

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Revision as of 08:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037469| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037469, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA037469

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037469, complete gene.

LocusTag

OS12G0512000

Ensembl Transcript ID

BGIOSGA037469-TA

Ensembl Protein ID

BGIOSGA037469-PA

Length

6836

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15979086..15985921

Sequence Coding Region

15979086..15979811,15981375..15981623,15981927..15982049,15985691..15985921

Genome Context

<gbrowseImage1> name=IndicaChromosome12:15979086..15985921 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:15979086..15985921 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAACCTCGCAACAAGATGGCGGCGGCGAGAGGCTGTTTCACGGCGGCGCCGGAGATGGAGACGGAGACGGTGCGGCGGTGGCGGCGGCGGCGAGGCAGGTGTGGGTGCCGGGGCCGGTGATCGTGGGGGCGGGGCCGTCGGGGCTGGCGACGGCGGCGTGCCTGAAGGCGCGCGGGGTGCCGTCGCTGGTGCTCGACAAGGACGCCACCGTGGCGGCGTCGTGGCGGGAGCGCACGTACGAGCGCCTCCGCCTCCACCTCCCGCGCGGCTTCTGCGAGCTCCCCCTCGCGCCGCCGTTCCCGCCGGGGACGCCGCCGTACCCGACGCGGGACCAGTTCGTCGCCTACCTCGACGCCTACGCCCGCGCCTTCGCCGTCGAGCCCCGCCTCGGGTCCCGCGTCCGCGCCGCCTCCTACGACGCCGCCATCGGCTTCTGGCGCGTCGCCGCCGTCGACGAGGCCGGCGGCGGAGGCGCCGGAGGCGAGACGGAGTTCCTGTCGCGGTGGCTGGTGGTGGCCACCGGGGAGAACGCGGTGGCGGCGTGGCCGGCGGAGGGCGTGGGCGCCTACCGCGGCGACGTGATGCACACCAGCAGCTACAAGAGAGGGGACGAGTTCGCCGGGAAGAAGGTGCTCGTCGTCGGCTGCGGCAACTCCGGCATGGAGGTCAGCCTCGACCTCTGCAACAATGGCGCCGCCACCTCCATGGTCGTCAGGGACAAGATTCATGTTCTGCCTAGGGAGATTCTGGGCATCTCAACATTTGGCCTCTCAGTGTTCCTTCTCAAGTGGTTTCCCATAAAATGGGTTGATGCTTTACTACTCATTTTCTCGAGATTGATCCTTGGAAACATTGAGAAATACGGCCTCCGACGACCTAAGATTGGTCCACTCCAGATCAAGTGCTCTACCGGGAAAACACCGGTGCTTGACATCGGCGCTCTTAAAAAGATCAAGAACGGCGAAATAAAGGTGGTCCCAGCAATACACTGCTTCACAGAGGATGGGGTCGAATTCGTGAATGGCTGTAGGGAGGACTTTGATGCCGTCATCTTTGCCACTGGATACAAAAGCAATGTGCCATCATGGCTCAAGGAGGAGGAGTTCTTCAGCGAGAGCGACGGGTTCCCGAGGAAGGCGTTCCCGCACAGCTGGAGGGGGAAGAACGGCCTCTACGCCACCGGATTCACCAAGAGGGGCCTCCAGGGCACCTCCTACGACGCCGCCATGATCGCCGCCGACATCGCCCGCCGCTGGACCAAGTCCCTCGCCGGCCCTACTGCCGCCGCCGACGCCGACCACCATGAGACATACATAGCTAATTAA</cdnaseq>

Protein Sequence

<aaseq>MPTSQQDGGGERLFHGGAGDGDGDGAAVAAAARQVWVPGPVIVGAGPSGLATAACLKARGVPSLVLDKDATVAASWRERTYERLRLHLPRGFCELPLAPPFPPGTPPYPTRDQFVAYLDAYARAFAVEPRLGSRVRAASYDAAIGFWRVAAVDEAGGGGAGGETEFLSRWLVVATGENAVAAWPAEGVGAYRGDVMHTSSYKRGDEFAGKKVLVVGCGNSGMEVSLDLCNNGAATSMVVRDKIHVLPREILGISTFGLSVFLLKWFPIKWVDALLLIFSRLILGNIEKYGLRRPKIGPLQIKCSTGKTPVLDIGALKKIKNGEIKVVPAIHCFTEDGVEFVNGCREDFDAVIFATGYKSNVPSWLKEEEFFSESDGFPRKAFPHSWRGKNGLYATGFTKRGLQGTSYDAAMIAADIARRWTKSLAGPTAAADADHHETYIAN</aaseq>

Gene Sequence

<dnaseqindica>1..726#2290..2538#2842..2964#6606..6836#ATGCCAACCTCGCAACAAGATGGCGGCGGCGAGAGGCTGTTTCACGGCGGCGCCGGAGATGGAGACGGAGACGGTGCGGCGGTGGCGGCGGCGGCGAGGCAGGTGTGGGTGCCGGGGCCGGTGATCGTGGGGGCGGGGCCGTCGGGGCTGGCGACGGCGGCGTGCCTGAAGGCGCGCGGGGTGCCGTCGCTGGTGCTCGACAAGGACGCCACCGTGGCGGCGTCGTGGCGGGAGCGCACGTACGAGCGCCTCCGCCTCCACCTCCCGCGCGGCTTCTGCGAGCTCCCCCTCGCGCCGCCGTTCCCGCCGGGGACGCCGCCGTACCCGACGCGGGACCAGTTCGTCGCCTACCTCGACGCCTACGCCCGCGCCTTCGCCGTCGAGCCCCGCCTCGGGTCCCGCGTCCGCGCCGCCTCCTACGACGCCGCCATCGGCTTCTGGCGCGTCGCCGCCGTCGACGAGGCCGGCGGCGGAGGCGCCGGAGGCGAGACGGAGTTCCTGTCGCGGTGGCTGGTGGTGGCCACCGGGGAGAACGCGGTGGCGGCGTGGCCGGCGGAGGGCGTGGGCGCCTACCGCGGCGACGTGATGCACACCAGCAGCTACAAGAGAGGGGACGAGTTCGCCGGGAAGAAGGTGCTCGTCGTCGGCTGCGGCAACTCCGGCATGGAGGTCAGCCTCGACCTCTGCAACAATGGCGCCGCCACCTCCATGGTCGTCAGGGACAAGGTGTATACTTTTACGTTGCGCACGTGTTTGCTACTGTTAAGTTGTTGCGTAATTAATTATTATTGCACTCACAAATTAACTTAGTAGTACAAACTTATTAATTACTCCTTCTAAAACTTGTCGTTTTGTATGAGGGTTGGGTCAAACGACTTTTAAAACATGTGACTACGAATAATTTCTACTCCGTATAATATTTGTCTTAGAAATATGAAAACCATATATATGTTTAAAAAGTACTTCAATAAAATCATATATATATATTTGTTGATAATATAAAACAGTGGTCAAAGTTGCTTTTTAATACTAAGTGCCCTATTATTAACCTGGAGGGGAGTAACTGGAGTAACTGTTTAGCTTCAGAAAATTAACTTGAAAAGTTTGCCAAGTTACCCTAAAATTTTGTACTGGACTGCTAGTTTCAAATTTTTTACTGTCTAAACTGTCTAAAAGCTAATTTAAAGCTATATTTCGTATAGAGGTCGAAATTATTGCTTGGAGTAGTTGAAGCGTGCTAGAAGACAAATTAAGAAAATAAAAGACCATATAATCACAAAATATAAAAGAAAATACATCGTCATCGCATTTTTCCCTCCAAAGCAACAGCCAGCTTTCTAAATAGAGAGTCCATGTTTTCTTATGTTAGTATTGAGGCCATATACTATAGAAGTTTTGGAACCAAAACTTCAAATAAATTAGGTATATCTACCAAAATACACTTTTGCAATTTATTTTCTCGTTTTAGGGGCACCACAGAGCAAACCTAGCATTTTCAGTTCCCAGGGTGTAATTCTGTGTGGTCAATTTATTCCGTCGCGCCACGTGTCTTTCCTTTCTGCCTCCCTTCTATAAAGAATCGTTGTCACTTTCATAGCAGAAAAACCATAATATATCATTTTCTGGAAAATTCACATGAATGACAGTTGCTTGCAGCAAAATTTAGTAAACATTGAGAGATTTTTTTTTCATTCTCACAAAATTTCTTATCATACATACATGCTTGTGTGCATCATATGTTTGTGCTACTTGCAATTGTAGCTTGCTGTTACATAGAAATACGCACTGATGTGGTGCCACATTGCCCCGTAAACTTCCCTTTCCTTATCTTGCACACCGCACAGGGGAGACAGAGAAAGAACAAGGGAAAATTACAACGACAGTGACAAGGGAAAAGAAAAGAAAAAAAAAATCAGAATTTGAGCTAGAATGCTCGAGAAACTAGATTATATACAGTGCCTAGCATGAATGTTTATGAATTTTCCTTCCCTTTTCTTATAGTGAAAGCAAGAGATGATGCTAATAATATTATTGATCACTATACGAGATTGGGTAAGTAGTGAGTCAAAATTACATGATCTAATTAAATTTAACGTAGCAATGCATTGGACAAATTAATTTCATCCCTGAAATATTGATATGTTGTGAATGAATAAAATATAGAAAAACCAATATATAGTTTTCACCATATATACATACTAGCTAAGAGTTTAGGCCGCTTTTTGTACTATGGATTTCAATATATGTGTATCCTTAATTATTCAACATTTTTTGTGGGTAAATTTGCAGATTCATGTTCTGCCTAGGGAGATTCTGGGCATCTCAACATTTGGCCTCTCAGTGTTCCTTCTCAAGTGGTTTCCCATAAAATGGGTTGATGCTTTACTACTCATTTTCTCGAGATTGATCCTTGGAAACATTGAGAAATACGGCCTCCGACGACCTAAGATTGGTCCACTCCAGATCAAGTGCTCTACCGGGAAAACACCGGTGCTTGACATCGGCGCTCTTAAAAAGATCAAGAACGGCGAAATAAAGGTAAATTATACAACTCATTATATACAAATCCCTCCCCCCCCCCTCCCACCCAATGATCATGCAAGCTCAACTAACAATATAATTCACTAAAAGAACAAACTAAATAACTAAAAACTGAACAGATCACATGATGGAATTAACAAGAGAAGCTATATAGTATAAACACCCAACCATTTGTACAACAAACATGAAGTAAAGAAAGATTTTTTGTCTTGCAGTGATGTAGGTCAGTGTACTATATGTTGTTTAATGATGTAGTGCAATGTCCTACCAAGTGAATCTAGAATGAGATTCTCTCTGCAGGTGGTCCCAGCAATACACTGCTTCACAGAGGATGGGGTCGAATTCGTGAATGGCTGTAGGGAGGACTTTGATGCCGTCATCTTTGCCACTGGATACAAAAGCAATGTGCCATCATGGCTCAAGGTACGCATGCACACCTAAATTCTTTATGTTCCACCAGTTTTTCTCGGCATCCTTTAATTTAGATGGCACATAACTATGTTGCGAATGATGCTACAAAGGGATTCACAAATTTAGCCAAATAATACTGCGAACATAGAGATATGTTTTTCGTCGTGCATAAATTCAATACACGGGACATATGTACATGGTCGCTCTGGTCAATAAACATCTATTAGAGATGTTTTATATTTAAGTTGTAAAAAACTTTGAACATTAGTTTATCTAGTAAAATATTTTGATTGGATTGACGCACATAAAATTGATGGGCAGCATGCATGCATGAATGATTGAGTGATTGACTGACTTATGTTTTATTTATATATGATGCATGGGGAGTACATATATATAGATCATGGAAATCACAAAGCAATATATATGCACTGTACACTTTCACATCAGAGATTGACCCTATGCTTGTATACATATGGTCTATGCCACCCTAATCAAGGTATTAGATAGCTAGGGATGGGCAATGACAATGATACTAAGAAGGGGGTGATATCCCTCCTAGATGGAGACATGGAAATTCATCCAAAAAATGACAATCAATAGCCAATTTTGCTTCAAAGATAGGAATGAACCATAGTTGTCACCTCGATCTTTAGATTCTAAGGTGAAAAATAATTGATCTAGGTAGATATAGGAGAGGACATATATGTCTTTTCAGTTTTCATCGCGCATGTGTGTGCGCGTGCGCGCGATCGAGATGATAGCTACTAGTCTTGTACTTCCCATTTGTATCTTGATACGTATATATCATTGAGTGTATGTAGACATGGACATGTCTAGGGTAGGGTTGTCATGTCAGCTTGTCAATGTTTTGATCGTGAGAACTATAGCTATATAGCTAGCTAATTGATTGAGGATTGGGATGCATGGGCGGCTCTTAGCTCTAGCTAGCTCTTGCATGTTCCTCTCAATCTCATGTGTATGTATATGTATGTATTTTGTTTGTTGTTGTGTTGTTGTTGGTGCTGTGTGAGATGGTCCGACAGTGGAGCCCATGTATATATATGTTGGCATTGATTTGGACCATATGCAATAGCGACTAGGCATATATGCAAAAAGAAGAAAAATAGAAATGGTTTTCATGGATGTGTTTTATACTTTTGTTCCATTCTCAAACAAAGCATGCATGCCTAATTGCTTTGCATCATGCAAGATAGTTTAGAGAAATGAAGATTTATACATATATATGCAAACTTCCAAATATATAATAATACTCATATAGTGTTTCACAATTTGTTTTCATGTTTTTCATGCTAAAGAGACAATTTTATGGTCTTGGAAGAACCATTAGCCACAAAGAGAATTATTGATCACATGGCAGTTAAGCAGCATGTCATAAACATGGTAGCAATTAACTAGGTATAGCTAGCTAGCCATTGAAGTGCACAGCCAGCACACATCTCTGCATGCACCTTCAAGTGGGAGTATAGCTAGAGAGGAAACTGCAACTCTGTGGGCAGTGAAAGGAAGATTAAATTCTTGCCAAAAACAAAACCACACCTCATCATAACATCACATATATATAAATATATACCATGTGAGTTTGAGTTTTTTTTTCTTTCTTCTGTTCATTTCCTCTGAGTTAGGTGATGCACATGCTGGCCCATAATGATTTGGTAAGGACCCATTTGTTGATCATGTGCATGGCAAGTGCAGCTGCCAGTACACCCCAACAGTAATGCATTGCATTGTACTCCTGCTGCATCTGCATATGCATGCCCACTCTACCTTTTGTAGGGTGGCCCATCTTGATGGCTTGCTTGATGGCTCCCATCTGTCTAACCCAGATTTTGATGATCTCAAGTGTGTGTTTGGCATGCACTGGAGCTGATCTGATCAACAGTGTGTCTACATGCTATTGCATGCATGCATCACTGTTTTAGCTCTTTCAATTGAGCAAAATGTGATGGATTCTAGCTAAGCTAGAACAGTTTGTGTTGTTCTCTTTTCTTGCCTATATTGGTCCACCAGATTCTGTGCTTCGTTTTCAGCTGGTAATCATTGGTTAGGAAAGACATCAACATATATATATATATGCACCTAGCTAGTTTTTGTTCTTTTTGCATCTTGCAAAAGGAACAATGATTATTGTCCTGGCTTTATCAATCGATGATAGTGTGCCGTATATCACAGGGACCTTGTAAGGAACATTGCAGTCATATGAACCACTCATTTAATTCTGGTCTAGGAGCATTGCTCTAATTACCTCATATCCCCTAGCTATCTGATAAAAGTCATCTATTACAAGTTACTATCTAGGTTTGTTAAATTGTACTCCACTAAGAAAAAAATACACTAGCACATAAAACTAATTCGTGCTGGCTAGGAACCCCACAGGTGCCGTGTTATGAATCCAACAAAGCGACACTTACCGATAATGGTTACTATTGCCAGTTATAGAACCGATACATATGTGAGCATATATGGGCGGTTCTAATATAATTAAGAACCGACACATATGAAACCTAGGGTGCATTGGAAGGCTCATATATGTCGGTTAAGAAGTACATTCGGCCGGTTCTTCACAACATTTGGTACTTATGGAGCTCACTAGGATGTGTTGGCAGGTCCATATGTGCTAGTTGTTGACGTAAAAAAATATACCTACACCTGCTCCAAACCAAAAAAATATATGATAAATTCATATATTCACAATCAAAATGATAGATTGATATAAATGTGTAGAATTTTAATTGAGGCTATCAAGGTCCCAAGTGATTGAAATCTTTGAAAACTTACAAATATTTAGGCATTTGAAATCTAGGATATACCTAATGAAAATATGCTTATTGACTTATCAGCGTGCTGGCCAAAATTTGCATTTTGTTAGAGTTGATTTTAGGGGTTTTTTTTCCATCGTAGTTTAGTTTCTAGTATTATCATTTTAAACTGCTGATTTTTCTATGGCTTATCAACGGTAGCTCAACCGAATGCTAGTAAAATCCCAAATTAACTTGGAATTAACCTTGCAGTAACCAGAATGTACACACATATTATGACTTGGAGTTTCCATTATTTTAGTGATATTGCCTGCTTGCCTTTCCTTCAATTTGGTATGTAGTACCTATACCCTTGCATGATGAAATAAGGATAAATATGTGCATTAGTACAGGTTCTTTGCCTTTTGAGACCATGCTGTACTAACGAAGGAGCCCAAAGTTTCTCTATCAGGCAAAATAGAATCCAGATGGAGCACCAATTACTCCTACAAAACTATGTGGCATATTTTGTTTTACTATTCTTTCAAATCAAGTATTGAGAAGTAGAAGTATATATACAACACTACAACTACTTAAAACATGTAATTAATGTATACATCTGAAGGAACAAAAATAATCCCTTGCAAAATACTTCGAATATAAATTTGAATGAAATGATCCAATATATCGATGCCCACATTTCATTGATAAACACAAATATATCCGATGGATGGAGATTGTCTACAGTACTACCGCTGCAGTGGCTGCTACATTTTGCATATATCTATCCAAATTAATCAGGACTAATTCAGCTTGTAATCAACAGCATAAATTAATATTAAAATCGTTACTCTCACCGTCCTAAAATATAACAATGTATAACTATGTATATAGGAGGAGGAGTTCTTCAGCGAGAGCGACGGGTTCCCGAGGAAGGCGTTCCCGCACAGCTGGAGGGGGAAGAACGGCCTCTACGCCACCGGATTCACCAAGAGGGGCCTCCAGGGCACCTCCTACGACGCCGCCATGATCGCCGCCGACATCGCCCGCCGCTGGACCAAGTCCCTCGCCGGCCCTACTGCCGCCGCCGACGCCGACCACCATGAGACATACATAGCTAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037469