BGIOSGA037498

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Revision as of 08:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037498| Description = BGIOSGA037498| Definition = Oryza sativa Indica Group BGIOSGA037498, complete gene.| tag = | tid = BGIOSGA037498-TA|...")
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Gene Name

BGIOSGA037498

Description

BGIOSGA037498

Definition

Oryza sativa Indica Group BGIOSGA037498, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA037498-TA

Ensembl Protein ID

BGIOSGA037498-PA

Length

2337

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16593249..16595585

Sequence Coding Region

16593249..16595585

Genome Context

<gbrowseImage1> name=IndicaChromosome12:16593249..16595585 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:16593249..16595585 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAACCATGGCGGCGACGGTGGCGCCGGCGGCGGTGGAGGAGGAGAGGGAGAGAGGTCGGTGTGCGTGAATATTGAAGCTCAGGCGAGTGATCCGGCGGGGATGGTGGTGGCGATGGCGACGCCGTTCGAGCCGCAGCTGTCGGACGATTCGCCGCCGAGGTCGAGCATGCAGAGCGTCGCGGAGGTCGTCGACGACGCGGCGGCGGTGGAGGCGACCGGAGGAGGAGGGGACGAGGTGGTGGCGGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTGGTCGCTCGCCGGCGCCGGCCGCTCCAGCTTCCGCCTCGTCGCCCGCTCCTTCCGCTTCGTGTTCCACCTCGACGACGGCAAGGCCGCCGCCGACGCCGGCGGCGGCGGCGGCGGCGCGCCGAGGATGGGGCGACGGCGATGGCGGATCAGCTGGAGCTTCCTGTCGCGGCACGTCGGGAGGGTGTTCTACTGGCTGCAGCTGGCGTCGGCGACGGCGTGCGTCGCGGTGTCGGCGGTGAGGCTCGCTGGGCAAGACTTCGGCGAGGCGGAGGACGCGCGGACCAACCGGAGGTCGGCGCTGGACATCTTCTACGGGCTCGCGCTGGCGGAGGCGCTGCTGTTCTTGATGGAGAAGGCGATGTGGGAGTGGGAAGTGAGCTACGGCCGCCTCCTCCAGCGCGTCGCCGGCGAGTGCCACCTCGCCGGCGAGCCCGGGCTGGTCGCCGTCCGCCGCTTCTTCTACGACGCCTACTCCCGGTGCGTCGACGGGAGCATCTTCGACGGCCTCCGGATGGACCTCGTCTCCTTCGCCGAGGAGCTCCTCGTCGGGGGCTCCCACGACGAGCAGCGCATCGGCGTCGGGATCCTCGTCAACGTCGCGGCGAACCCGCGGCTCGGGGAGGCCGCGCTGCGGCGCGTCGGCACGTCGGCGGCGGTGGTGGACCGGCTGGTGGAGATGCTCACCTGGAGCGGCGGCGGCGCCGAGGCCGCCGCCAGGGCGTCCGCCGCGCTCGTCGTGTCCAAGCTCGCCAGCAAGAAGCGGAACGCGCTCCGCGTCGCCGGCGTCCCCGGCGCCATCGAGTCGGTGTCGTCGCTGCTCTACGCCGCCGGCGACGAGGAGTGCAACCTCCTCGGCCTCCTCATCATCAAGAAGCTGGCGCGCGACCACGACAACTGCAGCAAGATCGGCAACGCGCGCGGCCTCCTCGACAAGATCATCGACTTCTCCGCCATCGGCGGCGGCGCCGTGATCACGCCGTCGCGCGCCAAGGCCGTGAAGCGGTCGCTGCAGGTGGTGAAGATGCTCGCGGAGACGACGGGGAGCACCGGGAAGCTGCTCCGGCGGGAGGTCGCCGAGATCGTGTTCACGGTGAGCAACATCCGCGCCGTGCTCCAGCACGGCGCCGGCCACCTCGAGCTGCAGCGGCTCGGCGCCGAGGTGCTCACCCGCCTCGCCATGGACGCGGACGCGCGCGAGAAGATCGGCGGCACCGGCGGCGTCGTCTCCCTCCTCCTCGCCATGTTCCTCCAGCCCTCCATCACCGACGAGGGCGACGCCGCGCGCGTCGAGGCCGGCGAGGCGCTCGCCATGCTCGCCCTCGACAGCCGCCGCAACTGCGACCGCATACTCCGCGCCGGCGGCGGCGGCGGCGCCGCCACCGTCGCCCGCCTCGTCGACGCGCTTACCGACGACGCGGCCGGCATCGGCGCGGCCCGGATCCTGACCAACCTCTGCGCGTACGCCGGCGGCGAGTGGTTCTCCGACCTCCACCTCGTCACCTCCGGCGCCGCCACGGCGCTGCGCAACGTGATGACCACCAAGAAGTCCAAGCTGCTCGAGGTCTCCCTGGGGCTCGTCGCCCAGATGGCGCGGTTCATGGGCCCGCACGAGCTGTCCCACCACCTCGCCGGCGCCGGCGTCGCCGGCGGCGAGGAGGAGCTGGTCGGACGGCTGGTCGCCGTGCTGGCGAGGTACGGCTCCCCGTCGATCCGGGTGCCGCGGATCCGGCGGTTCGCCGTGGAGCTCGCCGTCGCGATGATGACGGAGGGGAGGCGGCGGCGCGGCGCGGTGGCGGTGATGATGGCGGCGGCCGGGATGGGGCCGGTGCTGCGGCGCGTGGCGGAGACCACGTCGGAGCTCGAGTGCTTCCACGTCTTCTCCGGCAGCGCCGGGCTGAGCCGCCACGCCGTCTCCCTCTCCGCCCTCGTCGACACCGCGCTCGAGCTCATGGGGGCACGTGGCACCGACGACCAATAG</cdnaseq>

Protein Sequence

<aaseq>MDNHGGDGGAGGGGGGEGERSVCVNIEAQASDPAGMVVAMATPFEPQLSDDSPPRSSMQSVAEVVDDAAAVEATGGGGDEVVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTWSLAGAGRSSFRLVARSFRFVFHLDDGKAAADAGGGGGGAPRMGRRRWRISWSFLSRHVGRVFYWLQLASATACVAVSAVRLAGQDFGEAEDARTNRRSALDIFYGLALAEALLFLMEKAMWEWEVSYGRLLQRVAGECHLAGEPGLVAVRRFFYDAYSRCVDGSIFDGLRMDLVSFAEELLVGGSHDEQRIGVGILVNVAANPRLGEAALRRVGTSAAVVDRLVEMLTWSGGGAEAAARASAALVVSKLASKKRNALRVAGVPGAIESVSSLLYAAGDEECNLLGLLIIKKLARDHDNCSKIGNARGLLDKIIDFSAIGGGAVITPSRAKAVKRSLQVVKMLAETTGSTGKLLRREVAEIVFTVSNIRAVLQHGAGHLELQRLGAEVLTRLAMDADAREKIGGTGGVVSLLLAMFLQPSITDEGDAARVEAGEALAMLALDSRRNCDRILRAGGGGGAATVARLVDALTDDAAGIGAARILTNLCAYAGGEWFSDLHLVTSGAATALRNVMTTKKSKLLEVSLGLVAQMARFMGPHELSHHLAGAGVAGGEEELVGRLVAVLARYGSPSIRVPRIRRFAVELAVAMMTEGRRRRGAVAVMMAAAGMGPVLRRVAETTSELECFHVFSGSAGLSRHAVSLSALVDTALELMGARGTDDQ</aaseq>

Gene Sequence

<dnaseqindica>1..2337#ATGGACAACCATGGCGGCGACGGTGGCGCCGGCGGCGGTGGAGGAGGAGAGGGAGAGAGGTCGGTGTGCGTGAATATTGAAGCTCAGGCGAGTGATCCGGCGGGGATGGTGGTGGCGATGGCGACGCCGTTCGAGCCGCAGCTGTCGGACGATTCGCCGCCGAGGTCGAGCATGCAGAGCGTCGCGGAGGTCGTCGACGACGCGGCGGCGGTGGAGGCGACCGGAGGAGGAGGGGACGAGGTGGTGGCGGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTGGTCGCTCGCCGGCGCCGGCCGCTCCAGCTTCCGCCTCGTCGCCCGCTCCTTCCGCTTCGTGTTCCACCTCGACGACGGCAAGGCCGCCGCCGACGCCGGCGGCGGCGGCGGCGGCGCGCCGAGGATGGGGCGACGGCGATGGCGGATCAGCTGGAGCTTCCTGTCGCGGCACGTCGGGAGGGTGTTCTACTGGCTGCAGCTGGCGTCGGCGACGGCGTGCGTCGCGGTGTCGGCGGTGAGGCTCGCTGGGCAAGACTTCGGCGAGGCGGAGGACGCGCGGACCAACCGGAGGTCGGCGCTGGACATCTTCTACGGGCTCGCGCTGGCGGAGGCGCTGCTGTTCTTGATGGAGAAGGCGATGTGGGAGTGGGAAGTGAGCTACGGCCGCCTCCTCCAGCGCGTCGCCGGCGAGTGCCACCTCGCCGGCGAGCCCGGGCTGGTCGCCGTCCGCCGCTTCTTCTACGACGCCTACTCCCGGTGCGTCGACGGGAGCATCTTCGACGGCCTCCGGATGGACCTCGTCTCCTTCGCCGAGGAGCTCCTCGTCGGGGGCTCCCACGACGAGCAGCGCATCGGCGTCGGGATCCTCGTCAACGTCGCGGCGAACCCGCGGCTCGGGGAGGCCGCGCTGCGGCGCGTCGGCACGTCGGCGGCGGTGGTGGACCGGCTGGTGGAGATGCTCACCTGGAGCGGCGGCGGCGCCGAGGCCGCCGCCAGGGCGTCCGCCGCGCTCGTCGTGTCCAAGCTCGCCAGCAAGAAGCGGAACGCGCTCCGCGTCGCCGGCGTCCCCGGCGCCATCGAGTCGGTGTCGTCGCTGCTCTACGCCGCCGGCGACGAGGAGTGCAACCTCCTCGGCCTCCTCATCATCAAGAAGCTGGCGCGCGACCACGACAACTGCAGCAAGATCGGCAACGCGCGCGGCCTCCTCGACAAGATCATCGACTTCTCCGCCATCGGCGGCGGCGCCGTGATCACGCCGTCGCGCGCCAAGGCCGTGAAGCGGTCGCTGCAGGTGGTGAAGATGCTCGCGGAGACGACGGGGAGCACCGGGAAGCTGCTCCGGCGGGAGGTCGCCGAGATCGTGTTCACGGTGAGCAACATCCGCGCCGTGCTCCAGCACGGCGCCGGCCACCTCGAGCTGCAGCGGCTCGGCGCCGAGGTGCTCACCCGCCTCGCCATGGACGCGGACGCGCGCGAGAAGATCGGCGGCACCGGCGGCGTCGTCTCCCTCCTCCTCGCCATGTTCCTCCAGCCCTCCATCACCGACGAGGGCGACGCCGCGCGCGTCGAGGCCGGCGAGGCGCTCGCCATGCTCGCCCTCGACAGCCGCCGCAACTGCGACCGCATACTCCGCGCCGGCGGCGGCGGCGGCGCCGCCACCGTCGCCCGCCTCGTCGACGCGCTTACCGACGACGCGGCCGGCATCGGCGCGGCCCGGATCCTGACCAACCTCTGCGCGTACGCCGGCGGCGAGTGGTTCTCCGACCTCCACCTCGTCACCTCCGGCGCCGCCACGGCGCTGCGCAACGTGATGACCACCAAGAAGTCCAAGCTGCTCGAGGTCTCCCTGGGGCTCGTCGCCCAGATGGCGCGGTTCATGGGCCCGCACGAGCTGTCCCACCACCTCGCCGGCGCCGGCGTCGCCGGCGGCGAGGAGGAGCTGGTCGGACGGCTGGTCGCCGTGCTGGCGAGGTACGGCTCCCCGTCGATCCGGGTGCCGCGGATCCGGCGGTTCGCCGTGGAGCTCGCCGTCGCGATGATGACGGAGGGGAGGCGGCGGCGCGGCGCGGTGGCGGTGATGATGGCGGCGGCCGGGATGGGGCCGGTGCTGCGGCGCGTGGCGGAGACCACGTCGGAGCTCGAGTGCTTCCACGTCTTCTCCGGCAGCGCCGGGCTGAGCCGCCACGCCGTCTCCCTCTCCGCCCTCGTCGACACCGCGCTCGAGCTCATGGGGGCACGTGGCACCGACGACCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037498