Os12g0209200

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Revision as of 10:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0209200| Description = Similar to CONSTANS-LIKE a| Version = NM_001072925.1 GI:115487811 GeneID:4351769| Length = 2624 bp| Definition = Or...")
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Gene Name

Os12g0209200

Description

Similar to CONSTANS-LIKE a

Version

NM_001072925.1 GI:115487811 GeneID:4351769

Length

2624 bp

Definition

Oryza sativa Japonica Group Os12g0209200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5698842..5701465

Sequence Coding Region

5698905..5699114,5700947..5701369

Expression

GEO Profiles:Os12g0209200

Genome Context

<gbrowseImage1> name=NC_008405:5698842..5701465 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5698842..5701465 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagatcgggtgcgacgcgtgcgagcaggcggaggcggcggtgctgtgctgcgccgacgaggccgcgctctgccgccgctgcgacgccgccgtccactccgccaacaggctcgccggcaagcacacccgcgtcgcgctcctcctcccctcctcctcctccgccgccgccggcgacgacgaccaccaccccacctgcgacatctgccaggagaagacgggctacttcttctgcctcgaggaccgcgccctgctctgccggagctgcgacgtcgccgtccacaccgccactgcgcacgccgccgcccaccgccgcttcctcatcaccggcgtccgcatcggcggcagcgtcgacgccgccgccgcggccgacgtcatcgtcagcccaacaagcagcagcatcgcgccggccggctcggccagcagcaaccacgccggcgccgccggcaacaacaatggccggtcgccggcgccggtgaggttctcagggggagacggcggcgttgagccggagcagcagtggccgtggagtgacgtcttcgccgccgacgacgacgatgacgtcagcgccgccatggagcagtgctactatcatggcatctctgaacctcactcctccagcctcactggatga</cdnaseq>

Protein Sequence

<aaseq>MKIGCDACEQAEAAVLCCADEAALCRRCDAAVHSANRLAGKHTR VALLLPSSSSAAAGDDDHHPTCDICQEKTGYFFCLEDRALLCRSCDVAVHTATAHAAA HRRFLITGVRIGGSVDAAAAADVIVSPTSSSIAPAGSASSNHAGAAGNNNGRSPAPVR FSGGDGGVEPEQQWPWSDVFAADDDDDVSAAMEQCYYHGISEPHSSSLTG</aaseq>

Gene Sequence

<dnaseqindica>64..273#2106..2528#aattggtctctcgttgggctaacgacgcggcgatcgagtagcttagctagctgaagctgccacatgaagatcgggtgcgacgcgtgcgagcaggcggaggcggcggtgctgtgctgcgccgacgaggccgcgctctgccgccgctgcgacgccgccgtccactccgccaacaggctcgccggcaagcacacccgcgtcgcgctcctcctcccctcctcctcctccgccgccgccggcgacgacgaccaccaccccacctgcgacatctgccaggtacgttacgtactctcgattgattaattgctcttgctgtaattaacacagagagcttttaatttgtgtccttttagtcaaaaagagcggggaatttatgaattaaattaattaattcatatacggaattcaaagagatattttacatggtacaaaataaatatcatatatatatatatatatatatacttttctttttctttttctttgaccaagataaaccaaactcgtattggattaatgcggatatatagccaattagccatacaagttggacagatggagtatacttttctagcttctagagactagagaagagaaaaaggcgtactcaggcatttagatgattgccaattttcttcaagcaaggatacacatgcctagtaatactacaataactagccaagttattgaggatgcagttagcataacaaacattcctaaaagtttttttttgggaaattatatgcactactactaaataattttaattatatacatgtttaaccatatattgaaatcaataatattacacctacatgtataatctaaaccttaaatttattatattttattcgtaacaaaaaaaatttgacaatcttaagactataaatttttcagaattttattttattttgttacgctctatatagggtcaatttaaagatgagactttacatgaagatataatattattgaaaatacatgtacaaatttttctagattttttcaatgacatttgttagttgatatgtatagtgtatacgtgtaagggcttatgtgcatagaatacgtttccatgcagatgaattttcttttttttaatcaatgtttttgaaattttgaaacattgtatatggacatatatattctataaactaataattttgaaaatcaaaccaatcaattcaatctgatcaataattctagaatctaaaattagaaaaaaaaatacaagtatgttgtcggcttgtcgattatatataaccgttgttgatccatcactttctattttcttgatttaattctgaatctgcaaccaataaatgcaaggttatacttggcgtttattcttaatttagtatttattttattaaatgtttctgaaaatggggattaacatttcatagtctcgatttcagttatttttggcgttactcttaattttagttatatttgtcatgaaatctcaatttcagtcattcttaaaattttagttatatttgttggagtctcaatttcagtttttttttcacaatttagtatttgcaaaattatttcacaactattgtctataaagttatgctcgtccaggagtcaattttagtttttttaagaacttttatgatttattcctacctatacatgaatatacaaatttgttcccttttctcgagctaatatggaaattactaactacttgtacagatgttcatatcataggcattatattcatttgaagttttttttcagaggtttaaagttgttatgaagttgctcagtgtagatcatcctcttaatcatttcaaatagattaattagtaattaaccaagcctaaatgggcgtaattaaattgccgattaaccaagctactccatccgttcaagaaaaaaccaccttatattataggatgtgatatatcattagttgctatgaagttgctcagtgtagatcatcctcttaatcatttcaaatggattaattagtaattaaccaagcctaaatggggtaattaataaattgccgattaaccaagctactccatccgtccatgaaaaaaccacatcctaatcatattaggatgtagtaattaatttgcacgtaattacaggagaagacgggctacttcttctgcctcgaggaccgcgccctgctctgccggagctgcgacgtcgccgtccacaccgccactgcgcacgccgccgcccaccgccgcttcctcatcaccggcgtccgcatcggcggcagcgtcgacgccgccgccgcggccgacgtcatcgtcagcccaacaagcagcagcatcgcgccggccggctcggccagcagcaaccacgccggcgccgccggcaacaacaatggccggtcgccggcgccggtgaggttctcagggggagacggcggcgttgagccggagcagcagtggccgtggagtgacgtcttcgccgccgacgacgacgatgacgtcagcgccgccatggagcagtgctactatcatggcatctctgaacctcactcctccagcctcactggatgatggcagcttagcttcagtcaaattaattaatgagctgctataattgatttccatgaactgatcccacagaggtcatcaacatcgagaatattagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0209200, RefSeq:Os12g0209200