BGIOSGA037529

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Revision as of 08:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037529| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037529, complete gene.| tag = OsI_386...")
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Gene Name

BGIOSGA037529

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037529, complete gene.

LocusTag

OsI_38614

Ensembl Transcript ID

BGIOSGA037529-TA

Ensembl Protein ID

BGIOSGA037529-PA

Length

4907

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17227787..17232693

Sequence Coding Region

17227787..17227792,17228278..17228463,17228567..17228644,17228832..17228945,17229050..17229116
,17229205..17229266,17229373..17229512,17229803..17229929,17230009..17230123
,17230362..17230450,17230844..17230984,17231318..17231458,17231906..17231965
,17232535..17232693

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17227787..17232693 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17227787..17232693 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGTGCAAAAGTGTCGCACACCGTTAAATCGGCCTCCGAGGAGTCCAAAGTACTCGTGGTGGAGAATGGGAAGATGGTTGATGTTCAGGACAAGGAAATCACCATGGAAGGCCTCTGTTCCATAAGTTCTTATGACCAGTGGGCACGGATCCCTGTTTCTGGACCGCTTCCGAAACCTCGCTACAAGCATGCAGCTGCTGTGGTTCAGGAAAAGATGTATGTTTTTGGTGGAAATCACAATGGCCGTTACCTTGGTGACATGCAGGTTCTGGATTTCAAAAGTTTATCATGGTCGAAGCTAGAAGCTAAAATACAATCAGAAGAACCTTCAGACTTGACTGGAACAGCTTCGCTTCCTCCTTGTGCTGGTCATGCACTGGTTCCATGGGGAAACAAGATCCTCTGTCTTGCAGGACACACAAGGGAACCTACAGAAAGTCTCAGTGTTAAGGAGTTTGATCCACAAACTTGCACCTGGTCAACCTTGCGCACTTATGGCAGATCACCGAGCTCATGCGGTGGCCAATCAGTGACTCTTGTTGGAGGCACATTAGTAGTGTTTGGAGGTGAAGGTGATGGGAGATCCCTTCTGAATGACCTGCACGTTCTTGATCTCGAGACCATGACTTGGGATGAATTTGAGACCACAGGCACACCCCCTTCTCCAAGGTCAGAGCATGCTGCTGCGTGCTATGCTGATCGTTATCTCTTGATATTTGGCGGGGGTTCTCATTCTACATGTTTCAGTGATCTACATCTCCTTGACATGCAGACGATGGAATGGTCAAGACCAGAACATCAGGGTATTACTCCCAAACCAAGAGCAGGGCATGCAGGTGTTACGGTTGGTGAGAACTGGTTTATTACTGGAGGTGGTAATAACAAGAAAGGTGTCCCAGAAACACTTGTACTTAACATGTCAACATTTGTATGGTCAGTCGTTACTGGTCTTGAAGGCCGTGCACCCCCAACAAGTGAGATTTATGCTCTCAAGTCAAGTCGAAAGTCCGGTGTGCCATCTGGGCAACTAAATGAACCTGAAACAAATGGATTGGCCTCTGTGGCAGAAAATTCTAGCAGAGGGGTCATATTTGAAATTGAAGAACTTCAAGATGAAAAGACTATTAAGAGGGCAGATACAAGCAAAACTTTGTTGCAAGCAGTTAAGGGTGAGAAGAGTCATATAGAAGAAAAACTTAACCAGGAAGAGCTGCAGAGTTCCAGACTGAAGCAGGAATTAGCTAACGTGGAGACAAAAAATGAACTTGACTTAGTCCGCAATCAACTTTCTGCTGAAGAAGCAAGGGCGTCGCAACTTGAGAACGAAATTTCGGATCTTCAACAAAGGCTGCAGAAGATGGAGACCCTGGAAAAGGAGTCCGAATCGCTTCGGCTTGAAAAGGATGCAGAGTCCGACGATTCATCTTCAGGCAGCAACCAGCGGCCTGCTGATAAGGGCTTCTGGAGGTGGAATGGATAA</cdnaseq>

Protein Sequence

<aaseq>MASAKVSHTVKSASEESKVLVVENGKMVDVQDKEITMEGLCSISSYDQWARIPVSGPLPKPRYKHAAAVVQEKMYVFGGNHNGRYLGDMQVLDFKSLSWSKLEAKIQSEEPSDLTGTASLPPCAGHALVPWGNKILCLAGHTREPTESLSVKEFDPQTCTWSTLRTYGRSPSSCGGQSVTLVGGTLVVFGGEGDGRSLLNDLHVLDLETMTWDEFETTGTPPSPRSEHAAACYADRYLLIFGGGSHSTCFSDLHLLDMQTMEWSRPEHQGITPKPRAGHAGVTVGENWFITGGGNNKKGVPETLVLNMSTFVWSVVTGLEGRAPPTSEIYALKSSRKSGVPSGQLNEPETNGLASVAENSSRGVIFEIEELQDEKTIKRADTSKTLLQAVKGEKSHIEEKLNQEELQSSRLKQELANVETKNELDLVRNQLSAEEARASQLENEISDLQQRLQKMETLEKESESLRLEKDAESDDSSSGSNQRPADKGFWRWNG</aaseq>

Gene Sequence

<dnaseqindica>1..6#492..677#781..858#1046..1159#1264..1330#1419..1480#1587..1726#2017..2143#2223..2337#2576..2664#3058..3198#3532..3672#4120..4179#4749..4907#ATGGCGGTGAGTTTCCTTCCTCCGCGCTGCGAGTTACCCGGATCGGCTTAGACGATGCAATTTCTAGGCGAGTTAACCAGGGATTCCTCAAATTGTTGGTGGCTTGCTGCTGCTGGTCTCTTCGACCATTGAACCCGCAGTTCCTGCGAGTTGATGATTTGGTTTTGGTTCCCCTCCTGGGCATGTGTGCTGCAATTAGAACTCAGAAATTTGTAGAGATGGTGGAGGATTGGTGGTATTTGTTCAAGGCAAATCTTAGCTACAGAGCATGCCACTGTTTGACCAGAATGTGTGTTTACCTGTCACGCAAGCTTGGTATTTGTAGCATTTCTGTTCATGTTGCTATCTAGGCGTGTAGAATCCATGAATTCAGTATTATTTGAAAGTCATTTGCTGGCATTCAGGAGAGTTTGAATTTCTTTTTTCTCTTTATTTTTAAACCATGAATGATGTGTGTTCTCTTATAACCTTTTCACGTTTCATGTCACTAGAGTGCAAAAGTGTCGCACACCGTTAAATCGGCCTCCGAGGAGTCCAAAGTACTCGTGGTGGAGAATGGGAAGATGGTTGATGTTCAGGACAAGGAAATCACCATGGAAGGCCTCTGTTCCATAAGTTCTTATGACCAGTGGGCACGGATCCCTGTTTCTGGACCGCTTCCGAAACCTCGCTACAAGGTCCTCCTTTTTTTACTTGCATGATCTCTAAATTCCGTCTAGTCTGTTGTGCTGCCATCGTCTTCTCTTGGTGGTTTTGACATGCTGCACTTATCTTCTACAGCATGCAGCTGCTGTGGTTCAGGAAAAGATGTATGTTTTTGGTGGAAATCACAATGGCCGTTACCTTGGTGACATGCAGGTATATTAGTCGGTCATTATACTTAATATGTTTTTTTCTTGTGATGGATTCTTGGTATAAACTTTAAAATAGACTCAAAATTCCTTATTTGCTTATTAATAGAGGTTAATTGTGCAAGTTCCTAACTTTACTCTCGAGCGTTGAGAATGATATGCATCTCAACAATAGTATCTTCCTTTGGTTGAAGGTTCTGGATTTCAAAAGTTTATCATGGTCGAAGCTAGAAGCTAAAATACAATCAGAAGAACCTTCAGACTTGACTGGAACAGCTTCGCTTCCTCCTTGTGCTGGTCATGCACTGGTAATCACCAGATACTCTTTATAGTCAAGTTGAACGGAACTGGATTTTCTCCCAGATAGATATAACTGTGTAGCGTATTTCCTTCTGGCATTTAATCTCCGCAGGTTCCATGGGGAAACAAGATCCTCTGTCTTGCAGGACACACAAGGGAACCTACAGAAAGTCTCAGTGGTTAGCCTAATATTTTGCTCCTTTTTTTCTAATCTTATTTTTTTTGTGCGAGTTATATTTCTTATATAAAATAACATATTTATGTCAGTTAAGGAGTTTGATCCACAAACTTGCACCTGGTCAACCTTGCGCACTTATGGCAGATCACCGGTACCTTTTTTTTAATCTATTTATATTGTCAGAAAGCTTCTAAAGTACTCGCTGCTTTTTTTTTTTTGTCTAAGAATATGTGGCGGTAATCTTCCTTTTGCTTTAGAGCTCATGCGGTGGCCAATCAGTGACTCTTGTTGGAGGCACATTAGTAGTGTTTGGAGGTGAAGGTGATGGGAGATCCCTTCTGAATGACCTGCACGTTCTTGATCTCGAGACCATGACTTGGGATGAATTTGAGACCACGTAAGTTTTGTGATTGAAGCATGTTTTTCAGTTGTTGTAAAGTGAACAAATGACAATATATTTTTTTTTAAAAAAAAAGTGATCAAAATGTTTATGGTCCTTAATATTAGGATTCTGCTGAATGACCTGAATTTGGTAACTCGTGTGAAAATGCTATTGCAGGCGTACTCCACAAGTTATATATTTTTAGGCATTAATTATGAAATCATTCTTCTAGTAAATTCATTACCAAGTTCCTTGAGGTGCAGAGCTGATATCTGACTATTTTAAACTGTACTGTAATTTTCCAGAGGCACACCCCCTTCTCCAAGGTCAGAGCATGCTGCTGCGTGCTATGCTGATCGTTATCTCTTGATATTTGGCGGGGGTTCTCATTCTACATGTTTCAGTGATCTACATCTCCTTGACATGCAGACGGTGAGAATTGAATCTTTTCTTTAGAGCTGGTATTCACTACTTTAGGAAGTCCAAATAAATGGTTATCTGCTAATTGCAGATGGAATGGTCAAGACCAGAACATCAGGGTATTACTCCCAAACCAAGAGCAGGGCATGCAGGTGTTACGGTTGGTGAGAACTGGTTTATTACTGGAGGTGGTAATAACAAGAAAGGTAAGGATGAAAATCCAGCACCTACCTTATACTACGATTATGACTTCCAAAACAATTGAGCTTATTCAATTTCCATGGTTTTATCACCCTTGAGTGTAGCTCCTTATCCATTTACAGATGATATATTTGTTATATCTTTTCTTGATAGTTTTTGAGCTTTTCTTTAGAAAAAGAAAAGTAGCTCACGAAACAGTTTTCGCTCACATGTGCCTAATCGGCTAATCATGATGCACTGCAGGTGTCCCAGAAACACTTGTACTTAACATGTCAACATTTGTATGGTCAGTCGTTACTGGTCTTGAAGGCCGTGCACCCCCAACAAGTGAGGTGAGCTCTTTATGTAACTGGGTTCTCCTAGTAAATAAATGGGAGCATCATCTTTGTTCTGCATATTTACTCTGAATCATCTGATAGTTTGGGTGAAAAGTTTTGTTGGATCTTGTATTCAAACATTGAAGTTCATATTATTCTAACCAATGACATATTTGTAACCCTTGTTAATTGCATTTCTTTCATGTTATGCTCCCATGCTGTTGGTGATATTGAAATGCTGTTGTACATCAGGGCTCAAGTTTAGTGCTGCACAAAGTTAATGGTGAAGATTTTCTGGTGTCATTTGGAGGATACAGTGGACGTTACAGTAATGAGGCATGTCTATTTCATCAGTTTAGTTCTCCTGATGCATATCCTTGTATTCTGCTGAATAGTTCTTTGGTATAGATTTATGCTCTCAAGTCAAGTCGAAAGTCCGGTGTGCCATCTGGGCAACTAAATGAACCTGAAACAAATGGATTGGCCTCTGTGGCAGAAAATTCTAGCAGAGGGGTCATATTTGAAATTGAAGAACTTCAAGATGAAAAGGTAATGGTAGGGTGCAGAACTTCAGTTTTTTTTCCAAATATTTTTAGAAGCATGACTACTTGAAACTTGTTTAGGACATCGAAAGTCCCTAGTGCATATGTTTTGATTATTGTTTTTTTTGTTTTTATATTCATAGAAAATACTAAAAATATAACTAATTGACTACTGACGTCATTTTCATCTCAAATCTTAATCAGTTAATATTCCAAGGCTTGAGTGCACACATCCTAAAATGACGTCCGTTTAAGAATGGAGGGAATAACTCCCAAGACCTGTTCATGCACAACTTATGTGTTCTTAATCACTCAGACTTATATGTTCTTAATCTTTCAGACTATTAAGAGGGCAGATACAAGCAAAACTTTGTTGCAAGCAGTTAAGGGTGAGAAGAGTCATATAGAAGAAAAACTTAACCAGGAAGAGCTGCAGAGTTCCAGACTGAAGCAGGAATTAGCTAACGTGGAGACAAAAAATGTGGAACTTACCAAGGCAAGCTGAATTGTTTTTATAGAATTGTGCAGGAAATGTGATGCTTTTTTCTTTCATTTTACTATCAGAAGTTATGTCTCTACCTATTTCTTATGCATGGGCTACAATTTTCCATTTAAGTTCATTTGATATTTAAGGCTCAATTGTATGCAATTCAGAAAAATATTTATCAAAGCAATGTATGATGTACCTCAGTGAAATTTGTTGCTCTAGGCTGCTATTTCAGTTGTGTTTATCAAGATTCTGTCATTGAGTGCATTCAATGTTGAAACCTCAATGTGCTAAACTTCACAGCATATCACTTTGGAAATACTAGAATATAGATCGAATAGAAGATACTACCTCTGCTAGTGTAGGTGCTCTCTGCGGAGGAAGAAACATGCTTTAGTCTCTATGCTATCAAGTTTAATTGCTGTGCTCTCTGTTATGCAGGAACTTGACTTAGTCCGCAATCAACTTTCTGCTGAAGAAGCAAGGGCGTCGCAACTTGAGGTAGGTAAAAAGAATTTAGGGAATGAACACATGTTCAAGCATTCAGTGAATTGTTCAGATCAGAAAATAGGGTTTGATTTTACATCTATACTCATTTTCTTATGAAAAGCTATGAATGGTGTGCAACAACTTAGGGTGGATTCAGCATTATTGTTCCTTGAAGACACGTTTTCTTAATGATAAAAGGAAAACAAACACCTTTTGCATGGATTGGAACAAAGCTCATTGACAAATTAAATCGGAAACCAGCTTAACATGCGGCCTAACCAGAAACGAGAAAGGCAAACTGTTTATCCCTGTACATAATTGGAACCTGTACTTGCCATTTAGCTTATCTAGCTAGTACCTTTATTTTTAAAAAAAAATGGTACACAATAAATTAAAAAGTGACATACTTTTTTTACTATTTTATTTATGTCCATGGGCTGATTCTGTTGTTTTCAGATAACATTGTTCATTTACACCCTTTACGTTGCAGCCTTGAAATGTCATAGTTTAACCTTTCACGTCCTACTACTCCCATGGGGATATAGATGCAATGATAAGAATCTTTTGTTTCCAAATGCCAGAACGAAATTTCGGATCTTCAACAAAGGCTGCAGAAGATGGAGACCCTGGAAAAGGAGTCCGAATCGCTTCGGCTTGAAAAGGATGCAGAGTCCGACGATTCATCTTCAGGCAGCAACCAGCGGCCTGCTGATAAGGGCTTCTGGAGGTGGAATGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037529