BGIOSGA037531

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Revision as of 08:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037531| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037531, complete gene.| tag = OsI_386...")
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Gene Name

BGIOSGA037531

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037531, complete gene.

LocusTag

OsI_38619

Ensembl Transcript ID

BGIOSGA037531-TA

Ensembl Protein ID

BGIOSGA037531-PA

Length

4637

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17255398..17260034

Sequence Coding Region

17255398..17255947,17256045..17256204,17256427..17256475,17256580..17256693,17256875..17257306
,17257606..17257992,17258086..17258184,17258391..17258489,17258828..17258901
,17259398..17260034

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17255398..17260034 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17255398..17260034 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCCGGGAGGAGAGCGGCAATGGCGGTGGCGGTGGCGCGACGCCGGCGGCGGATTACCGGAGCTCGGACAGCCGGAGCTCGAGCCGGCGGAGCACGCGGTTCAAGGAGGACAACGAGTACGTGGAGATCACGCTCGACGTCAAGGGCGACGACACGGTCGCCATCCAGAGCATCCGCAACGGCGCCGACATGCCCGAGGTCGCCCTCCTCGCGCGCGGCCTCGCGCAGCAGCCGCCGCCGTCCGCGGCGCCCGGCCCCGGCGGGCTCTCGTCGCGGCTCAAGGCGGTGAGGACCGAGCTGAGGCGGATCGCGTCGTGGAAGTTCCCCAGCGGCGTTCTCAGCGGCGGCGGCGACGCGCCGGGCAACGGCAACGACCGCCGCCCTCGCCTCGACCGGAGCATGACCGGCGCCGCCCGCGCGCTGCGCGGGCTCCAGTTCCTCAACTCCAGCGCCGTCACCAATGGCTGGCCGGAGGTGGAGAAGAGGTTCGAGCGCCTCGCCGTCGACGGCTTCCTCCTCCGCTCCCGCTTCGGCCAGTGCATCGGAATGGTTGGATCCGAGGAGTTTGCGGTTCAGATCTTCGACTCGCTTGCGCGGCGGCGAGGGATCACGGCTCAGTTGCTGACCAAGGATCAGCTCCGGGAGTTTTGGGAGCAGCTCTCTGATCCAGGATTTGATGCCAAGCTGCAGACTTTCTTTGACATGGTTGACAAGAATGCAGATGGTCAGATCACTGAAGAGGAGCTCAAAGAGGTCCTCACCCTGACTGCCTCTGCAAACAAGCTGTCCAAGATCCTGGAGCGCGTGGACGAGTACACCGCGCTGATCATGGAGGAGCTCGATCCCGATCAATTAGGCTACATAGATATATCAAACCTGGAGTCGCTGCTGCTGCTGCCGCCGTCGCAGGCGCCGTCGAAGCTGGTGACGCACAGCTCCAACATCAGCCAGCTGATCAGCCAGAAGCTGGTGCCGACGCACGACCGGAACCCGCTCCGGCGGGGGCTCCGGCGGCTGTCCTACTTCATGGAGGACAACTGGAAGCGGGTGTGGGTGATGGCGCTGTGGCTGGCCATCAACGCCGGCCTCTTCACCTGGAAGTTCATGGCGTACAAGCGCCACCCGACGTTCGACGTCATGGGCTACTGCGTCTGCGTCGCCAAGGGCGGTGCCGAGACCACCAAGTTCAACATGGCCCTCATCCTCCTCCCCGTTTGCCGGAACACCATCACCTGGCTCCGTTCTCGCACCAAGCTCGGCGCCGTCATCCCCTTCAATGACAACATCAACTTCCACAAGGTGGTGGCAGGGGGAGTGGTGGTAGGGGTGGCGCTGCACGGGGTGACTCACCTGACGTGCGACTTCCCGAGGCTGCTGCACGCGAGTGATGCGGCGTACGAGCCGATGAAGAAGTACTTCGGGCAGACACGGATCCCGGACTACTGGTGGTTCGTGCGCGGCGTAGAGGGGATCACCGGCGTGATCATGGTGGTGCTCATGGCCATCGCCTACACGCTGGCGCACCCGTGGTTCCGCCGGAGCAAGCTTAGTGACAGCAACCCGCTGAAGCGGCTCAGCGGTTTCAATATGTTTTGGTACTCCCACCACCTCTTCGTCATCGTCTACATCGCCTTCGTTGTCCATGGCGTCTGCCTCTACATCAACCGGACTTGGTGGAAGCAGACGACATGGATGTACCTTGCCATCCCTATCCTGCTCTACGCCGGTGAGCGGATTTTCCGGGCTCTGAGGTCTCATGGCTTCACCACCGTAAGGATTGAGAAGGTTGCAATCTATCCTGGCAATGTGATAGCCATCCACATGACCAAGCCCCATGGGTTCAAGTACAAGAGTGGCCAGTACATCTATGTTAACTGCGGCGAGATATGCAGGCCTCCGATGAACGGCCAGAGCGGCCTCCTCCGGGCTGACTGCATGTCCATGGAGCACCATTCAAGGTTCCCCAAGCTCCTGATCGACGGGCCGTACGGCGCGCCGGCGCAGGACTACTGGAAGTACGACGTCCTCCTCCTCATCGGCCTAGGCATCGGCGCCACCCCTCTCATCAGCATCGTCAAGGACGTCCTCAACCACATCTACGACGACCCCGAGTCCGCCGCCTCGCCGCACACCACCAATGGCGGCGGCGCCGCGGCCGCGGCGAGGAGGGCGTTCATGACGAAGCGCGTCTACTTCTACTGGTGCACGCGGGAGGAGGGCTCGTTCGAGTGGTTCCGCGGCGTGATGAACGAGGTGGCCGACCGCGACGCCGGGCGCGAGTTGATCGAGCTCCACAACCACTGCACCAGCGTGTACGAGGAGGGGGACGCGCGGTCGGCGCTGGTGACGATGCTCCAGGCGCTCCACCACGCCAAGAACGGCGTGGACGTGGTGTCCGGGACGCGGGTGCGCACCCACTTCGCGCGCCCGAGCTGGCGCGACGTGTTCAAGCGCGTCGCCGTGAACCACCAGGGGCAGCGCGTCGGCGTCTTCTTCTGCGGCGACCAGGCGCTCACGCCGGAGCTCCGCCGCCTCGCCCAGGACTTCTCCCACAAGACCACCACCAAGTTCGTCTTCCACAAGGAGAATTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MASREESGNGGGGGATPAADYRSSDSRSSSRRSTRFKEDNEYVEITLDVKGDDTVAIQSIRNGADMPEVALLARGLAQQPPPSAAPGPGGLSSRLKAVRTELRRIASWKFPSGVLSGGGDAPGNGNDRRPRLDRSMTGAARALRGLQFLNSSAVTNGWPEVEKRFERLAVDGFLLRSRFGQCIGMVGSEEFAVQIFDSLARRRGITAQLLTKDQLREFWEQLSDPGFDAKLQTFFDMVDKNADGQITEEELKEVLTLTASANKLSKILERVDEYTALIMEELDPDQLGYIDISNLESLLLLPPSQAPSKLVTHSSNISQLISQKLVPTHDRNPLRRGLRRLSYFMEDNWKRVWVMALWLAINAGLFTWKFMAYKRHPTFDVMGYCVCVAKGGAETTKFNMALILLPVCRNTITWLRSRTKLGAVIPFNDNINFHKVVAGGVVVGVALHGVTHLTCDFPRLLHASDAAYEPMKKYFGQTRIPDYWWFVRGVEGITGVIMVVLMAIAYTLAHPWFRRSKLSDSNPLKRLSGFNMFWYSHHLFVIVYIAFVVHGVCLYINRTWWKQTTWMYLAIPILLYAGERIFRALRSHGFTTVRIEKVAIYPGNVIAIHMTKPHGFKYKSGQYIYVNCGEICRPPMNGQSGLLRADCMSMEHHSRFPKLLIDGPYGAPAQDYWKYDVLLLIGLGIGATPLISIVKDVLNHIYDDPESAASPHTTNGGGAAAAARRAFMTKRVYFYWCTREEGSFEWFRGVMNEVADRDAGRELIELHNHCTSVYEEGDARSALVTMLQALHHAKNGVDVVSGTRVRTHFARPSWRDVFKRVAVNHQGQRVGVFFCGDQALTPELRRLAQDFSHKTTTKFVFHKENF</aaseq>

Gene Sequence

<dnaseqindica>1..550#648..807#1030..1078#1183..1296#1478..1909#2209..2595#2689..2787#2994..3092#3431..3504#4001..4637#ATGGCGAGCCGGGAGGAGAGCGGCAATGGCGGTGGCGGTGGCGCGACGCCGGCGGCGGATTACCGGAGCTCGGACAGCCGGAGCTCGAGCCGGCGGAGCACGCGGTTCAAGGAGGACAACGAGTACGTGGAGATCACGCTCGACGTCAAGGGCGACGACACGGTCGCCATCCAGAGCATCCGCAACGGCGCCGACATGCCCGAGGTCGCCCTCCTCGCGCGCGGCCTCGCGCAGCAGCCGCCGCCGTCCGCGGCGCCCGGCCCCGGCGGGCTCTCGTCGCGGCTCAAGGCGGTGAGGACCGAGCTGAGGCGGATCGCGTCGTGGAAGTTCCCCAGCGGCGTTCTCAGCGGCGGCGGCGACGCGCCGGGCAACGGCAACGACCGCCGCCCTCGCCTCGACCGGAGCATGACCGGCGCCGCCCGCGCGCTGCGCGGGCTCCAGTTCCTCAACTCCAGCGCCGTCACCAATGGCTGGCCGGAGGTGGAGAAGAGGTTCGAGCGCCTCGCCGTCGACGGCTTCCTCCTCCGCTCCCGCTTCGGCCAGTGCATCGGTCAGCTCAAGCTCAAGCTCACCTCTGAAAATTCCTCTGAATTTCTGATGAATTCGAACTGAAACCGACTGAATTTTCTCGCCAAATCGTGTTCCAGGAATGGTTGGATCCGAGGAGTTTGCGGTTCAGATCTTCGACTCGCTTGCGCGGCGGCGAGGGATCACGGCTCAGTTGCTGACCAAGGATCAGCTCCGGGAGTTTTGGGAGCAGCTCTCTGATCCAGGATTTGATGCCAAGCTGCAGACTTTCTTTGACATGTATGTGTTCAGTTCAGTTCTATCAAAAATTCAAGTTTACATTCAGTCTTGAAGTAGTAGAATTTTAGTCGTTCAAATATTGTTAGTTGCACATGTTTTGTCTTGTAATAGTGAAATTTGCCACTGAACCTTTTGATTAGTATGCACATAGATTCAGTTATGACTTTTGGAAAGGGACTCTGAAGTTTGTTGACTGACATCTGAGTGCTGAATTTCTTGCAGGGTTGACAAGAATGCAGATGGTCAGATCACTGAAGAGGAGCTCAAAGAGGTAAGAAACTGGATGAAAGCAACACAAAAAAAAAAAAATAAGCATAATTTTTCCATGTAATTTGAAGCAGATTGAGGATTCTGAATTTTTCTTGCATTTTTCAGGTCCTCACCCTGACTGCCTCTGCAAACAAGCTGTCCAAGATCCTGGAGCGCGTGGACGAGTACACCGCGCTGATCATGGAGGAGCTCGATCCCGATCAATTAGGCTACATAGATGTACATACTCTCACCCTCAAATCCTCCACATATTTGAAAAAATATATATATATCTGAATTTGACATTGTTAAGAACAAGAATCTATGCAATTCTGAATCTGAAATTGTTCAGAGTACTAGAGTAGCAGTATCTGCAATTCTGAATTCTGACACTGTTCATGGTCACCTCCCATTTCCAAAGATATCAAACCTGGAGTCGCTGCTGCTGCTGCCGCCGTCGCAGGCGCCGTCGAAGCTGGTGACGCACAGCTCCAACATCAGCCAGCTGATCAGCCAGAAGCTGGTGCCGACGCACGACCGGAACCCGCTCCGGCGGGGGCTCCGGCGGCTGTCCTACTTCATGGAGGACAACTGGAAGCGGGTGTGGGTGATGGCGCTGTGGCTGGCCATCAACGCCGGCCTCTTCACCTGGAAGTTCATGGCGTACAAGCGCCACCCGACGTTCGACGTCATGGGCTACTGCGTCTGCGTCGCCAAGGGCGGTGCCGAGACCACCAAGTTCAACATGGCCCTCATCCTCCTCCCCGTTTGCCGGAACACCATCACCTGGCTCCGTTCTCGCACCAAGCTCGGCGCCGTCATCCCCTTCAATGACAACATCAACTTCCACAAGGTAACACTCTTTCACACAAGTATTTTTACGGTGATCTCTACTGTTAGTAGAATATGTACCGCTACTAGTATTATCACCAGTAGAAGCGATCTAAATCATTGATTTATAAATTCTACTAGTAGAAACAATATCGTACTATCGATAGTTAAGGTTGTACTATAAATAGACATTGTCCATTTGACGAGGGAGAAAAACAAAATAAAAGGTTCAGATTTATCCTATTACAATATTACCGGTAGAGAACATCGTAAAAACTCAGTAAGGTCATTATTGACAGTTGTCTTCTCCGGTGACGGCAGGTGGTGGCAGGGGGAGTGGTGGTAGGGGTGGCGCTGCACGGGGTGACTCACCTGACGTGCGACTTCCCGAGGCTGCTGCACGCGAGTGATGCGGCGTACGAGCCGATGAAGAAGTACTTCGGGCAGACACGGATCCCGGACTACTGGTGGTTCGTGCGCGGCGTAGAGGGGATCACCGGCGTGATCATGGTGGTGCTCATGGCCATCGCCTACACGCTGGCGCACCCGTGGTTCCGCCGGAGCAAGCTTAGTGACAGCAACCCGCTGAAGCGGCTCAGCGGTTTCAATATGTTTTGGTACTCCCACCACCTCTTCGTCATCGTCTACATCGCCTTCGTTGTCCATGGCGTCTGCCTCTACATCAACCGGACTTGGTGGAAGCAGACGGTGAGTGAACCAGCTTCCGGTCGATTTGCCCCCGTCGGGTTCTTTGTGGTCTGAATTCTAAAAAATGTTGCTAACTTTTGTGTGATTTTTCAGACATGGATGTACCTTGCCATCCCTATCCTGCTCTACGCCGGTGAGCGGATTTTCCGGGCTCTGAGGTCTCATGGCTTCACCACCGTAAGGATTGAGAAGGTAACCCAACTCTTTTTTGTTTAACATCAAAAAGAAAATTAGTTCTGTAGCACTGAAAGTTTATGGGAAAAAAACTTTATTAGCACAGAAAGATCTTTCTGTTCACTTTGACACGACAATTTCTTTCCCTGCAAATGTATACTGATATGGTACTGAATTCTGTTCAAGGAAATTGAATTAAAATGGGGTAAATTTGAAACGTGCAGGTTGCAATCTATCCTGGCAATGTGATAGCCATCCACATGACCAAGCCCCATGGGTTCAAGTACAAGAGTGGCCAGTACATCTATGTTAACTGCGGCGAGGTCTCGCCATTCGAGTGGTAAATCCTCAAATTCCTCAAAATTCTCCGGTCGCGGCATGCGAACCAATACTGGTTTTCACCTGACGATTGTTCACAACTGATCATGCCAATGCTTGTGTCATGACAGGCACCCGTTCACCATCACCTCGGCTCCCGACGACAGCTATCTCAGCATGCATATCCGGTGCCGCGGTGACTGGACCTCGAGCTTCAGGGCCATCTTCTCTCAGGCAAGCTGATCGCCGAGCCGCCATGGCGAATCGGGGAAAATTTCGGGTGCTCTGCTTTGTGAAAATTTGTGGATGATGATGGCTAACAATGTGGTGTTCTTGGTTGCAGATATGCAGGCCTCCGATGAACGGCCAGAGCGGCCTCCTCCGGGCTGACTGCATGTCCATGGAGCACCATTCAAGGTGCGCTTTTTTTCCCCGGAATTTTGAACAAATTTTTAGTTTTTGAGATGAATTCGCTCCAATGATTTGTTCTTTTGAAAAAAAGGGAGTAAAATTTAAAAACCTACAACTAATTTTTGTCAAAATTACCAATTTGCTGCAATTTCAAAATTCAGTAAACAACAACATTTTTTTTGTCAAATTAGATATTTGCCACAATTTCAGCTTGGCCAATTCAAGAGGACAACAACAATAATGCACGACTTTACCTGTAAGCCGGCCCTTTCAAAAATGATTTTGTCAGAGAGCTACAATAATACCTAAAGTCGCCCGAATAATTGCAGCTTTACGAAATTTACTCCAAAAAAAATCATTCTGATTCCATTTTGACATTTGACATTTCAAAAACGATTTTATCATAAAGCTACAATAATACCTAAACTTATTCAAATAATTGCAATTTTTTTTGGGTGAAATTTGCTCGAAATATGAACTCAAAATTTGGCATCTTGTGCAGGTTCCCCAAGCTCCTGATCGACGGGCCGTACGGCGCGCCGGCGCAGGACTACTGGAAGTACGACGTCCTCCTCCTCATCGGCCTAGGCATCGGCGCCACCCCTCTCATCAGCATCGTCAAGGACGTCCTCAACCACATCTACGACGACCCCGAGTCCGCCGCCTCGCCGCACACCACCAATGGCGGCGGCGCCGCGGCCGCGGCGAGGAGGGCGTTCATGACGAAGCGCGTCTACTTCTACTGGTGCACGCGGGAGGAGGGCTCGTTCGAGTGGTTCCGCGGCGTGATGAACGAGGTGGCCGACCGCGACGCCGGGCGCGAGTTGATCGAGCTCCACAACCACTGCACCAGCGTGTACGAGGAGGGGGACGCGCGGTCGGCGCTGGTGACGATGCTCCAGGCGCTCCACCACGCCAAGAACGGCGTGGACGTGGTGTCCGGGACGCGGGTGCGCACCCACTTCGCGCGCCCGAGCTGGCGCGACGTGTTCAAGCGCGTCGCCGTGAACCACCAGGGGCAGCGCGTCGGCGTCTTCTTCTGCGGCGACCAGGCGCTCACGCCGGAGCTCCGCCGCCTCGCCCAGGACTTCTCCCACAAGACCACCACCAAGTTCGTCTTCCACAAGGAGAATTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037531