BGIOSGA037561

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Revision as of 08:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037561| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037561, complete gene.| tag = OsI_386...")
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Gene Name

BGIOSGA037561

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037561, complete gene.

LocusTag

OsI_38667

Ensembl Transcript ID

BGIOSGA037561-TA

Ensembl Protein ID

BGIOSGA037561-PA

Length

4626

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17935482..17940107

Sequence Coding Region

17935482..17935702,17937883..17939485,17939628..17940107

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17935482..17940107 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17935482..17940107 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGACCCAGGGAGCCCATTGATACCTCAAAGTGGGCGGAAGTTAAATCCATCAACAACTATGCCCTGTTTATGGGATACATGTCTATGGCCGTCAAGGGACTGGGTTATCTTGTGGTTTTATGGACCACCGTTATTCTTCTCGGTGGTTTCGTCTCCGTGCTTGGGAAGAAAGATTTTTGGTGTCTCACAATAATTACACTTGTCCAAACTGCTGGAGTTTCCGATGTCCTTCTGAACGAAAAACTACAATATATTAGGAGGTCGTTTTCAGGCTTCTTCACGGCCACACTGCATACATTGCTCAGGAAGAGCAAGGATGTTGGTGTTGCGGTTTCATTATGTAAGCCGATCTTGCTCTGTGACTACATCCTGAACGAGTTGGTATTAGTATTCGTATGGGTGGTTCATGTGCTGGTGTTTGGCATCATCCTGTGCCCTCTGGCGGCGTTCTACATATTTGGGCTGCTCATCACCACCGGCCTCTCAGTGTGGCGCCTGATACAGCGCGACTATGGCGAGGCTGATGGAGGTGCGAACCTGCGTCCCGCGCTGAACGTCGTCTACTCCATCGCCGTGCTGCAAGGCGTGCTGTTCTGCTACCGGTTCGCCTCCCGCTCCGTGGGGAGAGAGCTTGTGGTTGATGTGCTCACCAAGTACAATTTCGACTCTTTTGGGAGCTCGAGAGCGTTGGTGGAGTACCTTCACGAGACGAGGACCGGGTGCGAGAAGGACCCGTCGTTCGTGGAAGGACGGAACCTAGTGACCTACGCCGTGGAGCTAACTAGGTCTGAATCCCCAAACGACTTCCTCTCCGGGGCCAGGATCCTGGCCACCCTCCTGGACCAACCCGAGCTGTCGGAGCAGCACAGGATGATCAAGCTGCTTGTCATCTCGGCGTCGTCCAGCCAGGTGCTTGACAAGTTGCTGCAGACGATGGACTGCAATGCGAGACCAAAGAACGCCGAGGCGAGGGAGCTCGCCGCGAGGATCGTGGCGCACCTCGCCGGCAACCTCCACCTCGAGCAGTTCCCTGGAGGGATCCAATTCATAGCCTCACTTCTCGATGGCCCTGTGGAGGAGGAGGAGGAGGACGACGATGACAATATCTACTACCGCGTCCTTCTGGATTACAACAAAGAGCTGATGCGGCAGGGTCTCCTCATCCTTGGGAAGCTCGCTGCAGACGCCAACTGCCGTCAAGCCATCGTCGACACGGAGGGCCTGCTCACCAAGATCATGGAGCCCCTGCGATCCGGCCTGCTCCACCTCAACGGCCATAATGATACATGGTCTGACACGGTGTACGCGTCCATGGAAGTGATGCGCCGGCTCGTCACTGCTCCTGGCAAGACTGGCGAAGAGGTCCGTCGCAGGATCTCAGGCGACATGGAGGCGATGGCTAGCATGGAGAGAATCCTCAAGTGCAAGGAGTGCAGCGACTTGCTGCTGCAATCACTGGAGATTTACACGCGGCTGCACGAGCGCACGCTTTCCAACAAAGAAAGCTGGAGAAGTTTGATCAACATACTTGTACACACCTTCACTCAATTCTACGTCAAAGACGACATCAGAGGATTGGCAGGTGAAAAGCTTGCAGCGCTGTCTTCCCATGGCCATGGCAAAGAAAATGCCAAGATAATCTTGCAAGTGAAAAAGGAGGTGATTGATGATCTCACTAAAATGCTTGCAAACCCAAATGAAAGGAACAAATTCAAAATAAGAGCAGCACAGATCCTGGAGCAGCTGTGTATTCATCTCACTGATGATGATGAATATCTCCAGTACCTCAAGAAAGCCTTAAAGATTGCGATGCCAACGGTGCTTTCGATAGCACTTGGTGAGGGATATCCGAGCAGCAATTTACTGGCAACAGTTTTATCTCTTTGTGCGACGATGTTACGCAATTTCACTAATGCAGAAGATTTCGCTCGCCGGTTCGATGATGAGATTAAAAGTGCCGAATTCAGTTTTCCTTGGAGGGGGATTACAAGTTTTCCTAGGAGGCTTAAGCACATAGTCATGTACAGTTATCCCTCTATCAGCTGCCTGAAAACATTGAAGCTTATCACCGAGATATTCATGCTAATGGTTCGACATGGAAGCCGTTACACCAAAGAAGAGACTGACAGCTTGATGGAATCGCTGTCCGAGGCTGCAGTTGAAATGTCTGATCTTGAGAACTTCATGCTTATATCTCGTAATAACAGAGACGGCACAAAGACTCTTGATTTCATTGTGAAAGAAGCAAAGGAGGAACTCATGCAGAGAGAGAGAGCTCCAGAAACGGGAGAGGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MARPREPIDTSKWAEVKSINNYALFMGYMSMAVKGLGYLVVLWTTVILLGGFVSVLGKKDFWCLTIITLVQTAGVSDVLLNEKLQYIRRSFSGFFTATLHTLLRKSKDVGVAVSLCKPILLCDYILNELVLVFVWVVHVLVFGIILCPLAAFYIFGLLITTGLSVWRLIQRDYGEADGGANLRPALNVVYSIAVLQGVLFCYRFASRSVGRELVVDVLTKYNFDSFGSSRALVEYLHETRTGCEKDPSFVEGRNLVTYAVELTRSESPNDFLSGARILATLLDQPELSEQHRMIKLLVISASSSQVLDKLLQTMDCNARPKNAEARELAARIVAHLAGNLHLEQFPGGIQFIASLLDGPVEEEEEDDDDNIYYRVLLDYNKELMRQGLLILGKLAADANCRQAIVDTEGLLTKIMEPLRSGLLHLNGHNDTWSDTVYASMEVMRRLVTAPGKTGEEVRRRISGDMEAMASMERILKCKECSDLLLQSLEIYTRLHERTLSNKESWRSLINILVHTFTQFYVKDDIRGLAGEKLAALSSHGHGKENAKIILQVKKEVIDDLTKMLANPNERNKFKIRAAQILEQLCIHLTDDDEYLQYLKKALKIAMPTVLSIALGEGYPSSNLLATVLSLCATMLRNFTNAEDFARRFDDEIKSAEFSFPWRGITSFPRRLKHIVMYSYPSISCLKTLKLITEIFMLMVRHGSRYTKEETDSLMESLSEAAVEMSDLENFMLISRNNRDGTKTLDFIVKEAKEELMQRERAPETGEV</aaseq>

Gene Sequence

<dnaseqindica>1..221#2402..4004#4147..4626#ATGGCTAGACCCAGGGAGCCCATTGATACCTCAAAGTGGGCGGAAGTTAAATCCATCAACAACTATGCCCTGTTTATGGGATACATGTCTATGGCCGTCAAGGGACTGGGTTATCTTGTGGTTTTATGGACCACCGTTATTCTTCTCGGTGGTTTCGTCTCCGTGCTTGGGAAGAAAGATTTTTGGTGTCTCACAATAATTACACTTGTCCAAACTGCTGGGTTAGTCTCTTCACAATTCAATTTTCGCATCTCTATTGCTTAATTTCTTGCTATATATTCTTAACTTTTACCTCACAAATAAGTTTTCTTGTTAAGTGTGTTTTGAAGCTATTTCCTGCTAATACTAGTTCTATTTTGTGTATCTTCACTTACTAGCAACTCCAGCATGTAGTAACATCCTATGTGAAAGTTCTGTGGGCATATTATGTTGGGGCTGAACCAAATTATTTTCAATGTGCGAACTACAATTTACCAACCAGCAAACATATTTCACACAATCAACCCCTCATCCTGCTATGAACTTTGAGGATAGTTTCAACTAGCAAATCAGCAGCGGAATAACAATAAACACATGCACACAAGACACGGTGTTTTATGTAGAAAAACCTCCTCGGTGTGAGGAGTAAAAAACCACGGGACCAACGGTCCACTCCAAACTTCCACTATAATCAACAATGGGTACAAATGGAGTATTCTCTAGAACATCTAGAGGCACATCACAACAACAACCATAGCAACTAACAAGAGGTATAACAACAACAAGCAGAGAAATGACAGATTTTGTCCACTTCGGTTCTTAGCTGAGATCTCCCAAATCATACAAATTGCACGAAACTTGGCAGAAATGATGGTCTATAAGTCCCTTCCAAGCTATCCAAAAACCAGCCCAATCAGACACCGTTTGACCCCTCAAACTGACATTCTACCACAGACTGTACACGCTGAAACTGTGGTTACTCGAGCTGAAGAAACCATACCCAAATCTGATGCTCTACTCAACCAATTCCCACCAAAACTGGCCAGATTGAAGTTCACCAAGTGAGAAATAAACTCACCAAGTTTGGTATTGATCCAAGCACGTTTGACCTTCCAATCGCTGACTTGATGAAGACCGGGTTAGAGCCACCAAACTGAAAATCTGCACACCTTTTTCTCCACTCTCCTCTCCTCTCTTGTGTTCTTGCTTGCCTTGTGGTCTCACATTTGGCTGCACAATCTCTCTCACATGGGAGGCTAGGGTTTTCTTCTCATCCACAAATTAAAGAGATGAGGCAATCTTCACCATCCATTCAAGAAATGAATCAACGTCTCAGATTCTTTGGATTTATTGGACTGCACATGGGCTGAGAGCAATGCTCCATGTGAAGGGAATTTAGCCCAACATATTACACACACGTATTAGTGACAGATCCGGAGTTAAATCCAGATCAAGCAAATCTCAACAGCTTTAACCATATTTAATTTGTGTACGACCGGGAGAGACACTATCACTTGTGAATCATTTCCTCTCTATATTCCTTTATGGATTATGGGAGGATGAATTTTATCCTACTGGAAAACTTGTTTCTTTTTTTTTTTTACAAGACCTTGATTTCCTACCAAAGTGTAAAGCAAATATCATCTTGAATAATTTTGTGGAAAAATCTTAAAACTTTATATCGATCTAACTGTAATATATAAACAAATAATTTTTAAATTCATAGTTTGTGACAGTCCAAGAGACAAGATTAAAAAATGGGAGAGTCCCTCATCTCATTATTAGTTAGATAATAGATTTTGAGTGGGAAAGTGTTTTTACCATCCTATATTTGACTTCAAAGCCTGGCTATTCAATATCTTTGACCCAATGGGCAATAGGGTGTGAAGGACTTGTTAGACCATGATGCCTACAGGACTCTGTTTTACCATCTATACACGTTCATTGTTAGACCCAATGGACAATAGGGTGTGAACGAACGAGTCAATTTTTTAAATTGTATTTCTATATGGACTCTGTTTTTTTCTTTTTCTCTGATTAAAGTGTAGGCTTCTTTTTCTATTCCTTTCTATATGGACTTTATTCTTCTTGTAATATTCCTTATTTTCTGAGTTTCAAATTTTTATTATTTCTAAATTGTATATCTATATGGACTCTAACGTATACTTTTAATTTTCTTACTTTTTAATTCTGAATTTCCATTTTCTCTATTGTATACCGGTCTGGACTGTAGTCTTCTCTTCATATATTTCTTATTTTTAATTCTGAATTTCACCTATTTTAAAATTATATTTCTATATGGATTTTGTTTTTTTCTTTTTCTTCGATTAATATGAAAATTTCTAGGCCATGAGAGCAAACGTGGATGCTTATTTTTCTATTCAAGTTAATAGATTTTAACGGTATAAATTCCCCCCTACAGAGTTTCCGATGTCCTTCTGAACGAAAAACTACAATATATTAGGAGGTCGTTTTCAGGCTTCTTCACGGCCACACTGCATACATTGCTCAGGAAGAGCAAGGATGTTGGTGTTGCGGTTTCATTATGTAAGCCGATCTTGCTCTGTGACTACATCCTGAACGAGTTGGTATTAGTATTCGTATGGGTGGTTCATGTGCTGGTGTTTGGCATCATCCTGTGCCCTCTGGCGGCGTTCTACATATTTGGGCTGCTCATCACCACCGGCCTCTCAGTGTGGCGCCTGATACAGCGCGACTATGGCGAGGCTGATGGAGGTGCGAACCTGCGTCCCGCGCTGAACGTCGTCTACTCCATCGCCGTGCTGCAAGGCGTGCTGTTCTGCTACCGGTTCGCCTCCCGCTCCGTGGGGAGAGAGCTTGTGGTTGATGTGCTCACCAAGTACAATTTCGACTCTTTTGGGAGCTCGAGAGCGTTGGTGGAGTACCTTCACGAGACGAGGACCGGGTGCGAGAAGGACCCGTCGTTCGTGGAAGGACGGAACCTAGTGACCTACGCCGTGGAGCTAACTAGGTCTGAATCCCCAAACGACTTCCTCTCCGGGGCCAGGATCCTGGCCACCCTCCTGGACCAACCCGAGCTGTCGGAGCAGCACAGGATGATCAAGCTGCTTGTCATCTCGGCGTCGTCCAGCCAGGTGCTTGACAAGTTGCTGCAGACGATGGACTGCAATGCGAGACCAAAGAACGCCGAGGCGAGGGAGCTCGCCGCGAGGATCGTGGCGCACCTCGCCGGCAACCTCCACCTCGAGCAGTTCCCTGGAGGGATCCAATTCATAGCCTCACTTCTCGATGGCCCTGTGGAGGAGGAGGAGGAGGACGACGATGACAATATCTACTACCGCGTCCTTCTGGATTACAACAAAGAGCTGATGCGGCAGGGTCTCCTCATCCTTGGGAAGCTCGCTGCAGACGCCAACTGCCGTCAAGCCATCGTCGACACGGAGGGCCTGCTCACCAAGATCATGGAGCCCCTGCGATCCGGCCTGCTCCACCTCAACGGCCATAATGATACATGGTCTGACACGGTGTACGCGTCCATGGAAGTGATGCGCCGGCTCGTCACTGCTCCTGGCAAGACTGGCGAAGAGGTCCGTCGCAGGATCTCAGGCGACATGGAGGCGATGGCTAGCATGGAGAGAATCCTCAAGTGCAAGGAGTGCAGCGACTTGCTGCTGCAATCACTGGAGATTTACACGCGGCTGCACGAGCGCACGCTTTCCAACAAAGAAAGCTGGAGAAGTTTGATCAACATACTTGTACACACCTTCACTCAATTCTACGTCAAAGACGACATCAGAGGATTGGCAGGTGAAAAGCTTGCAGCGCTGTCTTCCCATGGCCATGGCAAAGAAAATGCCAAGATAATCTTGCAAGTGAAAAAGGAGGTGATTGATGATCTCACTAAAATGCTTGCAAACCCAAATGAAAGGAACAAATTCAAAATAAGAGCAGCACAGATCCTGGAGCAGCTGTGTATTCATCTCACTGATGATGATGAATATCTCCAGTACCTCAAGAAAGCCTTAAAGATTGCGATGCCAACGGTAAGTAATGTAAATAAATAACAGAATAGATAAATAATATAGTCCTCGCTTGAATCATTACACTTGTCAATTGCCATACTGATTTGTTTAGATAATAGTCATCTATACTGATGAGAAACAAAATTAATTTTATTTGTTGCAGGTGCTTTCGATAGCACTTGGTGAGGGATATCCGAGCAGCAATTTACTGGCAACAGTTTTATCTCTTTGTGCGACGATGTTACGCAATTTCACTAATGCAGAAGATTTCGCTCGCCGGTTCGATGATGAGATTAAAAGTGCCGAATTCAGTTTTCCTTGGAGGGGGATTACAAGTTTTCCTAGGAGGCTTAAGCACATAGTCATGTACAGTTATCCCTCTATCAGCTGCCTGAAAACATTGAAGCTTATCACCGAGATATTCATGCTAATGGTTCGACATGGAAGCCGTTACACCAAAGAAGAGACTGACAGCTTGATGGAATCGCTGTCCGAGGCTGCAGTTGAAATGTCTGATCTTGAGAACTTCATGCTTATATCTCGTAATAACAGAGACGGCACAAAGACTCTTGATTTCATTGTGAAAGAAGCAAAGGAGGAACTCATGCAGAGAGAGAGAGCTCCAGAAACGGGAGAGGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037561