Os12g0210400

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0210400| Description = Protein kinase-like domain containing protein| Version = NM_001072932.1 GI:115487825 GeneID:4351777| Length = 7189 b...")
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Gene Name

Os12g0210400

Description

Protein kinase-like domain containing protein

Version

NM_001072932.1 GI:115487825 GeneID:4351777

Length

7189 bp

Definition

Oryza sativa Japonica Group Os12g0210400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5765088..5772276

Sequence Coding Region

5765207..5765294,5765382..5765502,5765586..5765657,5765781..5765855,5765933..5766004
,5766762..5766923,5767016..5767090,5767186..5767257,5767342..5767416
,5767514..5767582,5767693..5767770,5767892..5767963,5768083..5768214
,5768483..5768973,5769368..5769529,5769623..5769762,5769871..5770090
,5770451..5770686,5771613..5772104

Expression

GEO Profiles:Os12g0210400

Genome Context

<gbrowseImage1> name=NC_008405:5765088..5772276 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5765088..5772276 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtttctccatggattatcatcttcttgttgattgttcttgtgcaagcttttgtcgcttcggccgatacgaacgcacaggacacttctggacttaacgggcttgcaggtagctggggcagcgcaccatcgaattgggctggcaacgatccatgtggagacaaatggattgggataatttgcaccgggaaccgggtcacatccataagactgtcaagtttcggactgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctggacttatcctacaacaagaacttgaatggcccccttccttcaaccattggaaccttgagcaagctccaaaacttaattcttgtcggctgcggctttacaggtgaaataccaaaggagataggccagctctcaaacctgatatttctatcattgaactccaacaagttcactggtagcataccgccatcgcttggcggcctctcaaagctatattggtttgatctggctgacaatcagctcactggaggacttccaatatccaatgcgacaagtcctggtctggacaatctcacaagtactaagcacttccattttgggataaaccagctctctggcagcatacctagccagattttcaactcaaatatgaagctgatacatctgcttcttgacaacaacaaattctccggtagcatcccttctaccttaggccttcttaatacactggaagttctgcgtttcgataacaatgcgcagttgaccggaccggttcctaccaacctcaagaacctaaccaagcttgcagaattccatctagcaaacagcaatcttactggtccattgccagacctaactggaatgagctcactcagctttgtggacatgagcaacaacagcttcagtgcatctgatgcgccctcctggataaccactttgccatcgtcattgacttcactgtacctagaaaatctgcgcatcagtggggaggtaccgcaaagtctctttagtctcccttcaattcaaacactgaggcttcggggcaaccgtctgaatggcaccctaaatatagcagacttcagcagtcagctccaactagtcgatttgcgggacaactttatcacagcactaactgtaggaacacaatacaagaagactctcatgctctcaggaaatccatattgcaaccaagtgaacgacgacgtgcactgcaaagccaccggacaatcgaacccggcattgccaccatacaagactacctccaactgccctgccctgcctcccacatgcctctcaacccagcagctgagcccaacctgcatttgctctgtgccatacagaggcacactcttcttcagatcaccaggtttttcagacctgggcaacagctcatacttcattcagctggaggggacaatgaaagccaagttcttgaacctcagtctcccggtcgattcaattgcgatccacgacccgtttgtcgacaccaacaacaacttggagatgagcttggaggtgtaccccagtggcaaggatcagtttagtgagcaagacatttctggcattggtttcatcctgagtaaccagacatataagcctccttctaactttggcccatactatttccttggacagacctactcctttgctaatggggcgttgcaaacttcaaaatcgaacacaaaccacatcccgcttatcgtcggtgcttcggttggaggtgcagctgtaattgcagcattgcttgcactcacaatctgcattgctagaaggaagagaagtccaaagcagactgaagataggagccagtcttatgtttcctgggacatcaagagcaccagcactagcactgccccgcaggtgcgaggtgcgaggatgttctccttcgacgagctgaagaaggtcaccaacaacttctcggaggccaatgacatcggcaccggaggctacgggaaggtttacaggggaacacttcctactggtcagctggttgccgtgaagagatcccagcaaggctccctgcagggcaacctcgagttcaggactgagatcgagctcctgtccagggttcatcacaagaatgtcgtcagcctagtcggattctgcttcgaccagggcgagcagatgcttgtctacgagtatgtccccaatggcaccctcaaggagagcctcacagggaaatctggtgtgaggctggactggaagcggcggctccgggttgtcctcggtgcggcgaagggtatcgcctacctgcatgagctcgctgaccctccgatcatccaccgtgacatcaagtcgagcaatgttctcctcgatgagcggctcaacgccaaggtctccgacttcggcctgtccaagcttctcggcgaagacggtcgtggccagatcaccacccaagtcaagggcacaatggggtacctggacccggagtactacatgacgcagcagctgacggaccggagcgacgtgtacagcttcggcgtgctgctgctggaggtgatcacggcgaggaagccgctggagcgcggccgctacgtggtccgggaggtcaaggaggcggtggaccgccgcaaggacatgtacggcctccacgagctcctcgaccccgcgctgggggcctcctcggcgctcgccggcctcgagccgtacgtcgacctggccctccgctgcgtcgaggagtccggcgccgaccgcccctccatgggcgaggccgtcgccgagatcgagcggatcgccaaggtggccggcgctgggggtgcggccgccgccgagtcggcggcgtcggactccatgagctacgccgctagccggacgccgcgccacccctatggcggcggcggcggcgacagcgcgtcggagtatagcggcggcgggctgccgtcgatgagggtggagcccaagtga</cdnaseq>

Protein Sequence

<aaseq>MGVSPWIIIFLLIVLVQAFVASADTNAQDTSGLNGLAGSWGSAP SNWAGNDPCGDKWIGIICTGNRVTSIRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNL NGPLPSTIGTLSKLQNLILVGCGFTGEIPKEIGQLSNLIFLSLNSNKFTGSIPPSLGG LSKLYWFDLADNQLTGGLPISNATSPGLDNLTSTKHFHFGINQLSGSIPSQIFNSNMK LIHLLLDNNKFSGSIPSTLGLLNTLEVLRFDNNAQLTGPVPTNLKNLTKLAEFHLANS NLTGPLPDLTGMSSLSFVDMSNNSFSASDAPSWITTLPSSLTSLYLENLRISGEVPQS LFSLPSIQTLRLRGNRLNGTLNIADFSSQLQLVDLRDNFITALTVGTQYKKTLMLSGN PYCNQVNDDVHCKATGQSNPALPPYKTTSNCPALPPTCLSTQQLSPTCICSVPYRGTL FFRSPGFSDLGNSSYFIQLEGTMKAKFLNLSLPVDSIAIHDPFVDTNNNLEMSLEVYP SGKDQFSEQDISGIGFILSNQTYKPPSNFGPYYFLGQTYSFANGALQTSKSNTNHIPL IVGASVGGAAVIAALLALTICIARRKRSPKQTEDRSQSYVSWDIKSTSTSTAPQVRGA RMFSFDELKKVTNNFSEANDIGTGGYGKVYRGTLPTGQLVAVKRSQQGSLQGNLEFRT EIELLSRVHHKNVVSLVGFCFDQGEQMLVYEYVPNGTLKESLTGKSGVRLDWKRRLRV VLGAAKGIAYLHELADPPIIHRDIKSSNVLLDERLNAKVSDFGLSKLLGEDGRGQITT QVKGTMGYLDPEYYMTQQLTDRSDVYSFGVLLLEVITARKPLERGRYVVREVKEAVDR RKDMYGLHELLDPALGASSALAGLEPYVDLALRCVEESGADRPSMGEAVAEIERIAKV AGAGGAAAAESAASDSMSYAASRTPRHPYGGGGGDSASEYSGGGLPSMRVEPK</aaseq>

Gene Sequence

<dnaseqindica>120..207#295..415#499..570#694..768#846..917#1675..1836#1929..2003#2099..2170#2255..2329#2427..2495#2606..2683#2805..2876#2996..3127#3396..3886#4281..4442#4536..4675#4784..5003#5364..5599#6526..7017#actaatctagcctgttgcagttcaatcagagcttctgaccttgcaaaaggatgagctgctaaaagcatttcagtggcagctcaagagagagaagagagagaaatagaaactgcccaaacatgggggtttctccatggattatcatcttcttgttgattgttcttgtgcaagcttttgtcgcttcggccgatacgaacgcacaggacagtaagtatagtttcagttcttcaaaagtatatgttactacagtgctaattttgctcagtttgctgttcatcttgtctatgcctgcagcttctggacttaacgggcttgcaggtagctggggcagcgcaccatcgaattgggctggcaacgatccatgtggagacaaatggattgggataatttgcaccgggaaccgggtcacatccatgttggtatcagaaccagaaatttgtatatgcccatggatatcacttctcattgtgttcttccttctttgatggtgttttacagaagactgtcaagtttcggactgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctgtatgtatcttcttctctctgtagtttgagcactttagattgcaaatcaggcgtaaacatgtacaatagttggaaatttggaaatttatgcaaacttctgaaacgattcttttcttgttgcagggacttatcctacaacaagaacttgaatggcccccttccttcaaccattggaaccttgagcaagctccaaaacttgtgagactagttaaactttggagaatttcagtgcatggattcttgtttgacttgtgtcctctctcatttctctgcagaattcttgtcggctgcggctttacaggtgaaataccaaaggagataggccagctctcaaacctgatatttctgtaagaaacagttcagacctgattgctgattcttcactatgtccaaaatctaaggcctactatctcatttgcatgtcctaaactttatcttcttgaacacaagatgttttccctaagttttggattgaccttccaactgtcaaatactatggttgggtttttagacttttgcaatttatgttatactcactcctaatcgagtggtgtccttccatttaccaatagctgaattggtcagcgttttgtcatgcatgcttataatcttgtagtaagaatttaagaacttggtctgaacattcagaaagagaagggcgatgcagttaaacctatttcttttgggacaattcaagtatatttgttatggagaatgaacaaaaaaaatgttatcttgtttcattactagataatattgaattctcaggtctggtgtccatttcaataacacaaaggattaatggctcaaggtttttaaaatattgcaaacatggtctagttatgcacttgatatgtttgcagaaattccttaatgaaatctgcatcatttatatgttacttcgcaacttaaccagtagcaactttaatctttgttctatttttttttctcaaacacacaggagatctacgcatcattatattgttctgtgttattattgtataagcctttgacattgtaattgcttctcgtaatatttctacacataatttcagtataataatcctgataaaaaggattgctaattgtattccattcctgcagatcattgaactccaacaagttcactggtagcataccgccatcgcttggcggcctctcaaagctatattggtttgatctggctgacaatcagctcactggaggacttccaatatccaatgcgacaagtcctggtctggacaatctcacaagtactaagcacttgtaagtacattactattttttttattgatgtcataagatttttgatcttctggtctgttttctgatgaatatgtatacacattttgtcgcagccattttgggataaaccagctctctggcagcatacctagccagattttcaactcaaatatgaagctgatacatctgtatgactaaccaaattattcatcctcacaattgtgtaaattattgttgtgaagctcagatctgaggctgatctcttacatctgtaattatccaggcttcttgacaacaacaaattctccggtagcatcccttctaccttaggccttcttaatacactggaagttctgtaagtacaagcacatattatggatgacaataaaattcagaggttgacactgctgccttttgccatgaaatttgttcgtcacaggcgtttcgataacaatgcgcagttgaccggaccggttcctaccaacctcaagaacctaaccaagcttgcagaattgtgagtttattatgtttgtctgcttttgtttagtatcattgtatcaattctaaaacattagtagctcactctcttttttcttttcatttgaaaatagccatctagcaaacagcaatcttactggtccattgccagacctaactggaatgagctcactcagctttgtgtaagtgatgagtcaaaccttccaatgtgaaaaacaagatttgacctgcaattataatactatgcaaatttctggactgtttcctcttctgacctgaaacattgttacagggacatgagcaacaacagcttcagtgcatctgatgcgccctcctggataaccactttgccatcgtcattgacttcactgtaattctctcttctctactttcttgtgctaagtcatcatcaacaatttatataattctatcttctctgatatctcgtgctacttcatcaaggattttcgtctgattttcactgtctccaggtacctagaaaatctgcgcatcagtggggaggtaccgcaaagtctctttagtctcccttcaattcaaacactgtgagtagtcattgcttgctagtttaaaacataatgctagtgtcaactttgagctaaactgatagatataaatagtatagttcaaattcagttctgtgattacttcaagacaaatgcaggaggcttcggggcaaccgtctgaatggcaccctaaatatagcagacttcagcagtcagctccaactagtcgatttgcgggacaactttatcacagcactaactgtaggaacacaatacaagaagactctcatgtaagaatactctcactgtttttgcttattggctgatcagccatagccaaaatttgaattttaaacattaactttagagttgattttgaggttttctcaacgtagtttattttctagcattggcttttaattcgctaagaatgcagatataatagtctgatccatgaattatttttagttgcttcgttcatttttccacggcttatatcagccacagttacttttatcacaatcttcagagctctggctgattcacctctgttcacaggctctcaggaaatccatattgcaaccaagtgaacgacgacgtgcactgcaaagccaccggacaatcgaacccggcattgccaccatacaagactacctccaactgccctgccctgcctcccacatgcctctcaacccagcagctgagcccaacctgcatttgctctgtgccatacagaggcacactcttcttcagatcaccaggtttttcagacctgggcaacagctcatacttcattcagctggaggggacaatgaaagccaagttcttgaacctcagtctcccggtcgattcaattgcgatccacgacccgtttgtcgacaccaacaacaacttggagatgagcttggaggtgtaccccagtggcaaggatcagtttagtgagcaagacatttctggcattggtttcatcctgagtaaccagacatataagcctccttctaactttggcccatactatttccttggacagacctactcctttgctaatggtaagaccatactccctctggtttttaatagatggaatcgttaactttttgacatatgtttgactattcatcttattaaaaaaaattgtgcaaatatccgaaaatgtaagtcatgttttaaagtaattttagtgataaatccaagccacaatcaaataaatagtaatttctttgaataagacgactggtcaaatacgtatcaaaaagtcaatggcgtcaaatagtaattatgtaatttctttgacacacatttgaccattcatactttagatgacatctcctgctgtggttacagagactcaacaaatgctcattttttagataatggaagcttttattgaactcagtcaacaaatgctcatgtgtgtgttgaatcattgtttcatgaattcaggggcgttgcaaacttcaaaatcgaacacaaaccacatcccgcttatcgtcggtgcttcggttggaggtgcagctgtaattgcagcattgcttgcactcacaatctgcattgctagaaggaagagaagtccaaagcagactgaagataggagccagtcttatggtaagcactgttcatcatctaattcagtataacaacatctcattgttgcatactttcttctgaatgtggcatcacaactgcaatcatctgcagtttcctgggacatcaagagcaccagcactagcactgccccgcaggtgcgaggtgcgaggatgttctccttcgacgagctgaagaaggtcaccaacaacttctcggaggccaatgacatcggcaccggaggctacgggaaggtgaagaagccattgctgatcacttctgatacattctgtcctcctttgacatgttcagaacttgaaatgttcagaacttgaaatattcagagctgttgatcactgcaggtttacaggggaacacttcctactggtcagctggttgccgtgaagagatcccagcaaggctccctgcagggcaacctcgagttcaggactgagatcgagctcctgtccagggttcatcacaagaatgtcgtcagcctagtcggattctgcttcgaccagggcgagcagatgcttgtctacgagtatgtccccaatggcaccctcaaggagagcctcacaggtaaaactactacttattgttattaattcttaaagatgaatgcgaaaatgtcgacagattttatagtggtctagctctgatactgatagtctccatggtttgaaatttcgaaccctaccggcaagcacaaatctccacctacattttcggattttttcaaatatttgggaatttggtcaatttgtttaaattcaatcgaaatatgttaaaatttgaaataattttggtaaaaaacaccgaaattcatgatgttttttttcaaaattccgacaaccatcgaaatttcggaaatttcagtggttattgaaagtgcaaacactgattgtctctcatggtggtgccatcgaaaactttgttcagggaaatctggtgtgaggctggactggaagcggcggctccgggttgtcctcggtgcggcgaagggtatcgcctacctgcatgagctcgctgaccctccgatcatccaccgtgacatcaagtcgagcaatgttctcctcgatgagcggctcaacgccaaggtctccgacttcggcctgtccaagcttctcggcgaagacggtcgtggccagatcaccacccaagtcaagggcacaatggtaagtagtactacctccatcccaaaatgtttaaagccgttgacctttttaaaaatgtttgaccgttcgtcttattcaaaaaatttaagtaattgttaattctttttctatcatttgatttattgttaaatatactttaatgtatacatatagttttacacatatcacaaaagtttttgaataaaacgaacggtcaaacatgtttaaaaaagtcaacggtgtcaaacatttaaggaagatactccctccgtccctaaatgtttgacgccgttgacatttttaaacatgtttgaccattcgtcttattcaaaaaatttatgtaattattaattattttcctatcatttgtttcattgttaaatatattttatgtatatatatagttttacatatttcacaaaaaaatttaaataagacgaacggtcaaacatgtataaaaaagtcaacagcgtcaaacatttaaggatggagggagtatttcataacgaccaaccaatccacctaaaagattaaactattcatctccaatagttttacttaaaagcttaaaactttttttctccaaccatcaagttgacccaaaagcttgaattattcggtctccgaacaatgaattgacctaaaagcttaagtaatttttatataatgatttaatggttcttgagaggtacaacgatagtttaaaatttagtctctctttggacttctcgaagcataaaaaaaaggtttttgccttcaaccattgagtcaacacaaaaactttaattgttggctgcgtgcatccacttggatgtagaggccggcttaatccattttctaaaaaaactaaattgtattatgtccgaccaaccagttcagccaaaagcttaaactatctttttttttttttttctatcggtgtgacacgtgtggatgtgacgtggcaggggtacctggacccggagtactacatgacgcagcagctgacggaccggagcgacgtgtacagcttcggcgtgctgctgctggaggtgatcacggcgaggaagccgctggagcgcggccgctacgtggtccgggaggtcaaggaggcggtggaccgccgcaaggacatgtacggcctccacgagctcctcgaccccgcgctgggggcctcctcggcgctcgccggcctcgagccgtacgtcgacctggccctccgctgcgtcgaggagtccggcgccgaccgcccctccatgggcgaggccgtcgccgagatcgagcggatcgccaaggtggccggcgctgggggtgcggccgccgccgagtcggcggcgtcggactccatgagctacgccgctagccggacgccgcgccacccctatggcggcggcggcggcgacagcgcgtcggagtatagcggcggcgggctgccgtcgatgagggtggagcccaagtgaagatggtggatttgtttccaacgttttgtgtacagcttgatgatttagagtatgtacgatttcatttgtgtaaattttggtcgtctatgcatgctaagtttggatttttgaatttgaatgtttgatgatggctaattgagaatttggggtcgttgtcaatcgaactataccc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0210400, RefSeq:Os12g0210400