BGIOSGA037578

From RiceWiki
Revision as of 08:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037578| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037578, complete gene.| tag = OS12G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037578

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037578, complete gene.

LocusTag

OS12G0556300

Ensembl Transcript ID

BGIOSGA037578-TA

Ensembl Protein ID

BGIOSGA037578-PA

Length

4038

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18166793..18170830

Sequence Coding Region

18166793..18166992,18167104..18167152,18167890..18167927,18168247..18168328,18168415..18168464
,18168649..18169115,18169261..18169424,18169511..18169717,18169823..18169979
,18170127..18170234,18170430..18170503,18170633..18170830

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18166793..18170830 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18166793..18170830 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAATTAATGGCGCCCAAGAAGAGGGAGCTGCTGCTGCTGGAGCGCAGGGGGTCGGAGAAGCGCCTGCGGGTGACGGTCCCAGTCGCCGCCGCCGCCGCCGTGGCGGCCGTCGGTGTGGGGACGGCGGCGCTGGCGTCGCCGGCGACGAGGATGCTGCGCAAGATCGTGCTCGTGCTGCTCTTCCTGCTGCGAATGAGCGAGAGGGTCACGGTCGTGGAGAGCATCTCTCAGATTGGCCGTATGGTTCAGAGGCTTCACAATGCTCAGGGTGTTATTATCAAAAAATTGGAAAATATACAGGAAAACATGCAGGAGCGGATGGAAAACATGCAGGAGCGGATGGAGGATATCAGTCATGAAGTGAAACAATTGAAGCATCTGCATTCCAATCGTCATGCTGATCAACACCCAGGACTGGAGCCAAACACAAATGTTCAACTGCGTTTCCTGGATAATCTGAAGACTCCTGTTTACACCGAAAAGAACATCACAGCTGAAAGCAACGAGGCTATCAGAATAGGTATCTTTGAAGGTGACAACATGATTACAGATGGCCCACTTTCCAAGGTGAAAGTCGAAATCGTAGTTCTCCGCGGTGATTTCTCCAACGATGGTCGGGTGAGCTGGACTGAAGAGCAGTTCAACAATCACATTGTGCAAGGTCGGAATGGGCAAGGATTCGTGTTGGGCGGTGATTGTGGTGTTTGGTTGAAAAAGGGGGAAAACCGCTTGGGCAAGATCCGTTTCAAGGAAGGATCATCCAGGACCCGCAGTCGGATGTTCATTCTGGGAGCAAGAGTATGCAAGAGCGAAAACACCAGTGTCCGAGTTCAGGAAGCTGTCATGAAGCCAGTTACCGTGTTGGATCGCAGAAATGAAGCAAATGAGAAGAGGCATCCTCCAATGCTGGACGATGAAGTGTTTCGCTTGGAGGAAATCTGCAAAGATGGGACTTACCACAAGAGGCTTCAGAAGGCTAAAATCTTCACAGTGCGTGACTTCTTGAAGGCTTTGAACACGAACGCCAAGAAGCTCCGTGAAGAAGTTCTCCAGATGAAGAAGAAGACGAACTCATGGGATAAAATGGTTGGGCATGCCAGGGAGTGCTGTCTCAGAGACCAGCATGAGCTGAAAGCGTATCAAAGTGAAGAAGAAAATGCGACACTTTTCTTCAACGGTGTGCATCAAATTGTTGGAGCAAAATTTGGTGGTGATTATGTCATATATGAAAATTTTGATCCAGCCCAAAAGACAAAAGTGAATAAACTGAAAGACCGTGCACATGCTAAATTGGATGACATTCCATCCGATTTTGTAATGAAAAACAACATTCCTGAACCGATCAGTCCAACTTCAGCAGCTGCTGCAGGCCCATCAAATCGTTCTGATCATCAGATGCCAAATCAAGGAACTATAGGAGCTGAAAACTTGTGCAATGGTGTGGCGTTTTACTCGAATGCAATCTGCGACGGCAGCACCTCTAATCTTAATGATGTGAGCACACATGATTATCCAGATCAAGCACCAACGCCATTTCCTGATTGGCAACAAGATCTCCAAAGGCTGATGAGCTCTTCTGATACAATCGACTGGCCGAGCTTTGAGAGGATTGTATTGGGTGGCACCTCAGAGGAATCGAGTTCTGCTCAACACCAAGTTCATCAACTCCATGAAAGCATGCCTCCTGCTACATCGCCATGGGTGGCGGCGCCGCAATCGCGTGCTCAACACGGGGAGGAGCCTAGCAGGTTCCCATTTCCAGGATCAGACCACAATAACAACTGTTAG</cdnaseq>

Protein Sequence

<aaseq>MEELMAPKKRELLLLERRGSEKRLRVTVPVAAAAAVAAVGVGTAALASPATRMLRKIVLVLLFLLRMSERVTVVESISQIGRMVQRLHNAQGVIIKKLENIQENMQERMENMQERMEDISHEVKQLKHLHSNRHADQHPGLEPNTNVQLRFLDNLKTPVYTEKNITAESNEAIRIGIFEGDNMITDGPLSKVKVEIVVLRGDFSNDGRVSWTEEQFNNHIVQGRNGQGFVLGGDCGVWLKKGENRLGKIRFKEGSSRTRSRMFILGARVCKSENTSVRVQEAVMKPVTVLDRRNEANEKRHPPMLDDEVFRLEEICKDGTYHKRLQKAKIFTVRDFLKALNTNAKKLREEVLQMKKKTNSWDKMVGHARECCLRDQHELKAYQSEEENATLFFNGVHQIVGAKFGGDYVIYENFDPAQKTKVNKLKDRAHAKLDDIPSDFVMKNNIPEPISPTSAAAAGPSNRSDHQMPNQGTIGAENLCNGVAFYSNAICDGSTSNLNDVSTHDYPDQAPTPFPDWQQDLQRLMSSSDTIDWPSFERIVLGGTSEESSSAQHQVHQLHESMPPATSPWVAAPQSRAQHGEEPSRFPFPGSDHNNNC</aaseq>

Gene Sequence

<dnaseqindica>1..200#312..360#1098..1135#1455..1536#1623..1672#1857..2323#2469..2632#2719..2925#3031..3187#3335..3442#3638..3711#3841..4038#ATGGAGGAATTAATGGCGCCCAAGAAGAGGGAGCTGCTGCTGCTGGAGCGCAGGGGGTCGGAGAAGCGCCTGCGGGTGACGGTCCCAGTCGCCGCCGCCGCCGCCGTGGCGGCCGTCGGTGTGGGGACGGCGGCGCTGGCGTCGCCGGCGACGAGGATGCTGCGCAAGATCGTGCTCGTGCTGCTCTTCCTGCTGCGAATGTGCGTTCCTGCTGCCTCCATCCATCGTGTCCTTGCTAATCCCCATCCCATCCCATCCCATCTCTCTAATTTTTATTTTTTTTGTTTTGTTCTTTGTGTTTGTGTGTGCAGGAGCGAGAGGGTCACGGTCGTGGAGAGCATCTCTCAGATTGGCCGTATGGTGAGCAAATGGATAAACGGATCAATGATTTTGCCCCCCCCCCCTGCAAAAAATTATACAGTCGTTTTGTTCTCTGCAAAAGTGCAAATCTTTATCTTTCTTCCTCCAATGATTTTAGCCCCTTTCCTTTTGCATATACTTGTTTGATTTGATAGTCGTAAAGGTAGCATATTCCATCTTCAGTACTGATTCCCAATCTATTATCACTCCGTTTCTAATTATTTGACACCGTTGACTTTTTTAAACATATTTGACCGTTCATCTTATTCAAAAAAATTGTGTAATTATTAATTTTTTTCGTATCATTTGATTCATTGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTATTATATATTTCACAAAAGTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAGTTAACGGTGTCAAATATTTAGAAACGGAGGGAGTAATAATTAACATGTTCTGAAAGTCGGGCAAGTGCATATCTGTTTGTGATGTATATGAAACTCATTTTATCTTACTGATTTAACTGACAGTCATAAGTTTGTTTTGGTATGGTATTTGGTTCAGCAAAAATGGCATAAACTCATTGTACTTTGATAGTTTGATATTGGGTATTTCTTTTCTTCCTACAGCCTACAATGTTTCTTCTTCCTGTTTCCTTCTTGTTTCATGGCTGTGGCTAAATTTACGTTCTTGTGCTTTCATAGGTTCAGAGGCTTCACAATGCTCAGGGTGTTATTATCAAGTAAGTGTGTGATAGTTATATTGTTATTTTACCATTTTATTTCTCTTCTACTCCGTATCAATATGCTTCAGGGGCGGAGCCACCGCCCGGGCTCGCCGGCGAAAACTCCATTAAATTTTAATATTGATGAGTAAATCGATGATGAAATTTCTGTAGTAAATACTAGTTATATGGAAATTTGCCTTGGCTCAAAAATCTTCCTGGCTCCACGACTGATGTGCTTTAATAACTAGCATGAGTAGTTTTTATTTTTCTCATGAAAATATGGAAGTTCTGCATGTCATAGTTTAATGAAAAATGATTTTTTTTTGGTTATCAGAAAATTGGAAAATATACAGGAAAACATGCAGGAGCGGATGGAAAACATGCAGGAGCGGATGGAGGATATCAGTCATGAAGTGGTTAGTTCCGTAGTCCTCTAAATCAGTGTTTTACATGTTTCATCCTCATTTGATAACCTTGTACTTTTTTTTTCTTACACTGACAGAAACAATTGAAGCATCTGCATTCCAATCGTCATGCTGATCAACACCCAGGGTAAAAGATTCACAAGTGCACATCATTCATAGATTCTTTCGTCCTTTTTTGTTCTCATCGTGAAATGTTAGATATTAATTATCCATTTGGCCAGTTGTCAAGTTCTCTTTTCCATAGTGTACTATATCAATTTACTAACACTACATTCTGAGCTTTATCATATGTCCTCCATGCTTTTCTTCAGACTGGAGCCAAACACAAATGTTCAACTGCGTTTCCTGGATAATCTGAAGACTCCTGTTTACACCGAAAAGAACATCACAGCTGAAAGCAACGAGGCTATCAGAATAGGTATCTTTGAAGGTGACAACATGATTACAGATGGCCCACTTTCCAAGGTGAAAGTCGAAATCGTAGTTCTCCGCGGTGATTTCTCCAACGATGGTCGGGTGAGCTGGACTGAAGAGCAGTTCAACAATCACATTGTGCAAGGTCGGAATGGGCAAGGATTCGTGTTGGGCGGTGATTGTGGTGTTTGGTTGAAAAAGGGGGAAAACCGCTTGGGCAAGATCCGTTTCAAGGAAGGATCATCCAGGACCCGCAGTCGGATGTTCATTCTGGGAGCAAGAGTATGCAAGAGCGAAAACACCAGTGTCCGAGTTCAGGAAGCTGTCATGAAGCCAGTTACCGTGTTGGATCGCAGAAATGAAGGTGCTTTTTTTTTTTCCATTTTTTCAGGCAGCTGTTTCTTAGCAGTGGACACTCATGTGGAGTGTAGAGGCCGGAATGGCATCCATTATCTTAAAAACAAATCAGCTTTTTCTTTACCAGGACACATTTGTCTTGTCTTTTGCAGCAAATGAGAAGAGGCATCCTCCAATGCTGGACGATGAAGTGTTTCGCTTGGAGGAAATCTGCAAAGATGGGACTTACCACAAGAGGCTTCAGAAGGCTAAAATCTTCACAGTGCGTGACTTCTTGAAGGCTTTGAACACGAACGCCAAGAAGCTCCGTGAAGAAGTAAAACATGTTCCATACATTTTGTTTGCAGCTGTCGTACTATTGTCATCATGATTCATGACATCCATCCATTTGTTGCTATGCAGGTTCTCCAGATGAAGAAGAAGACGAACTCATGGGATAAAATGGTTGGGCATGCCAGGGAGTGCTGTCTCAGAGACCAGCATGAGCTGAAAGCGTATCAAAGTGAAGAAGAAAATGCGACACTTTTCTTCAACGGTGTGCATCAAATTGTTGGAGCAAAATTTGGTGGTGATTATGTCATATATGAAAATTTTGATCCAGCCCAAAAGGTACATGCTGAACTCAACATCTTTCTGGCAGCATATGATCCTATGTTCATTTGTGTTTCCTTTATCAGACAATCGATAAGAAACAAATATGTTGTTGTCACGCAGACAAAAGTGAATAAACTGAAAGACCGTGCACATGCTAAATTGGATGACATTCCATCCGATTTTGTAATGAAAAACAACATTCCTGAACCGATCAGTCCAACTTCAGCAGCTGCTGCAGGCCCATCAAATCGTTCTGATCATCAGATGCCAAATCAAGGTTAGTAAAGACTTGCTGTACTAGTCTACTGGATACCTGGTTATTTTTTGGTCTTCGACGCATATGGTGCACACTACACGATACTCTCTTTGAATGCTCTTGTCTTCCTCACCACACACAATTGATGCCGGAATTTCTTATTTCAAGGAACTATAGGAGCTGAAAACTTGTGCAATGGTGTGGCGTTTTACTCGAATGCAATCTGCGACGGCAGCACCTCTAATCTTAATGATGTGAGCACACATGATTATCCAGGTACTTACTGATTCCACAATTTTCCTTTGGTAGGGTTTTGCTTGGATATGTGAATTTCCTTTGAACTTTGAGCTAAACATTAAGAAATACCCAAACGAGTCCCTCTACCCCTTTAGCTCTTATCTTTTCCTTCGTGCATGCATTCTGCATCAATCATTTTGATACGATGACATCTAAAACTCCAAATTTTTGCAGATCAAGCACCAACGCCATTTCCTGATTGGCAACAAGATCTCCAAAGGCTGATGAGCTCTTCTGATACAATCGACGTTAGTGAAACCCACAGCAATTCAGCTCTGTTTATTTTTATTTTCATTACTGTCAGGATGCTGTGTACAGCTCAGTGCTTGCAGTAATTTTTACATAGTATGGTTCATGACTCGGCATTCATTTTGCAGTGGCCGAGCTTTGAGAGGATTGTATTGGGTGGCACCTCAGAGGAATCGAGTTCTGCTCAACACCAAGTTCATCAACTCCATGAAAGCATGCCTCCTGCTACATCGCCATGGGTGGCGGCGCCGCAATCGCGTGCTCAACACGGGGAGGAGCCTAGCAGGTTCCCATTTCCAGGATCAGACCACAATAACAACTGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037578

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA037578&oldid=53883"