BGIOSGA037600

From RiceWiki
Revision as of 08:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037600| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037600, complete gene.| tag = OS12G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037600

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037600, complete gene.

LocusTag

OS12G0563400

Ensembl Transcript ID

BGIOSGA037600-TA

Ensembl Protein ID

BGIOSGA037600-PA

Length

2893

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18590932..18593824

Sequence Coding Region

18590932..18591141,18591229..18591390,18591482..18591587,18591683..18591881,18591990..18592071
,18592199..18592281,18592397..18592529,18592661..18592832,18593097..18593824

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18590932..18593824 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18590932..18593824 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGCGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTTGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAAACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAAAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCTATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAATGGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAACAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAAATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGA</cdnaseq>

Protein Sequence

<aaseq>MDAAAPPPRGQEGQGDRSGGDEGGRYGVLLYYKYAEVPDAAALAAFYESHCRALALVGRVRVGPDGVNATLGGRMAALEKHVAEMSSNALFDGTDFKLASCDDPVDERVARECGFTSLSVRLVKELVTLCANPSLATPQITCAGRHLSAAEFHSVLQSVGATSDSEATVEKSEVVVLDARNVYETRIGKFRVPNVETLDPEIRQYSDLPLWIDEHAEKLRGKSIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLELFPDGGYFEGKNFVFDHRISVGSLKENILGTCLLCGSSFDDYSPRCRCSHCRMLVLVCSTCQDSTKDYVCELCQKNGKQCCQTSPRQGCKTESELIDSSDFGIPMIINQSATSTIPRSNGSEQLKKLKILCLHGFRQNASNFKGRTSALAKQLKHIADLVFIDAPHELSFVYKPNPDHCSGRSSLPSGTPKRKYAWLVAPNSIFYAEHDWKIADAPFDPLQYQQQTDGFEESYAYLEHAISQMGNIDGILGFSQGAAMAALFCRQQQKTCGSLKFRFGIFCSGYPAPIISDFDGEPIKLPSLHCFGNSEDHDRQIANRASTELANRFDKSCRSVIEHDMGHIIPTRPPFIDKIKEFLSNFI</aaseq>

Gene Sequence

<dnaseqindica>1..210#298..459#551..656#752..950#1059..1140#1268..1350#1466..1598#1730..1901#2166..2893#ATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACAGTGAGCATCCTCCTTCTCTCGCTCTAGCCATTTTGGGGGTCGCTCCTCGCTGACCTCGCTGGATTCTGGATTTGTGGTGTCTGCTAGCTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGTGTTTCTCCTCTTACCATTCAGGAATTCGATGCAACCTCGTAGCTGTCCCAATTACATTTACATTTTGAGTTGTTTCTTGCAATTGGCAGGAGCTGGTAACGCTTTGCGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTTGGTCAGTGGATTCTGAGACTGATGTTTGCCCCATATTGCGATTCTCTGGATTAAAATTGAGTACTGAATGTTTAAGGTGGGGTTTTGTTATAGCAGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAAACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTATATATGACTGGATCTTACAAATTAACTATTGAACAACCTGCTGTTGTGGATAGACTTTGGCATCTCTGAAGTGATCAACCTAACTACTGATTTTGTATTTTTCAGGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAAAACGTATTTCAGGTATTGCAACCCTTTTGAATTGGTAATTTGACACTTCGAGAAATAGTGTTGAAGATGTTGTGGTAGTGTGCATTGCTTCATTGCTTGGGGCCAACTGATCATTCATTTCTTGTTATGCTCGCGTTAGCTATATGGTGGCATTCAGAGATATCTGGAGCTATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGTACAACTATATCTGTACTGTTAACATGTAGTTTCACTCAATTCCTTAGTGGAATTGTTGTCCTGAAGATTTCTTAGATTCTATACTGCTAACTTGTTTTGATGTGAATAATCAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGTTGATAGGATCCTATACCTGTTATTGCTTTCCTTTTAAGTAACTTTTAATGATTGGCATCTTAACTTCTGCTATTGAAATATGTGCTTCCATGCCACAAGATTTGCCTACTAAATTTCTTTCTTCTCCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAATGGTAAGGTCTGTATCAGTTTGCTTTTGTACTCTCCCAGCTATATACTATCCACAGCAAGTCTCTCCATGTTGATACGTGCACTCCATGTTGATACGTGCATATTGAGCAAAGATTCAGTAACTTATTCCATTTTGTTTAAACCTGTGTATTTGTTTGAAAGAACATGCACATGTGTTGTTCCATTCATTTCAGTCTTCAAGTCAGCTATGTCTACTTGCATTTCTTGATGCTGGGCGTCCTCTGATGTGTGGAAATGCTGTACAGGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAACAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAAATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA037600&oldid=53905"