BGIOSGA037601

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Revision as of 08:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037601| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037601, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA037601

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037601, complete gene.

LocusTag

OS12G0563500

Ensembl Transcript ID

BGIOSGA037601-TA

Ensembl Protein ID

BGIOSGA037601-PA

Length

7281

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18595029..18602309

Sequence Coding Region

18595029..18595076,18597186..18597380,18598419..18598523,18599359..18599622,18599701..18599793
,18599923..18600129,18600698..18600801,18600979..18601045,18601119..18601226
,18601308..18601400,18601486..18601576,18601666..18601736,18601964..18602092
,18602202..18602309

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18595029..18602309 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18595029..18602309 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGTCGGTGCTGCCGATGTGGAAGGAGCTGGACTACTTCAAGGAGTACGCGGCGAGGCTTCAAAGCTTCCGGGAGGACGACGACGCGGCGGCGGCGACGTTGTCGGAGGCGCTCTACGTCGTCAGCATGGGCACCAACGACTTCCTCGAGAACTACTACGCCATGGCGCACGCCCAAGCGGCGGAGTACTCCACGGCGGCAGCACCTCGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTGATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCTGCCAGAGAAGAGCTTGGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCATACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGTGTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAGGATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCGGACAAAGCATTTCCACTTAGTGAGATGCAAAAGATCCTTCCTGAAATGATTGAGCGGTCAAAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTTCGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGGTGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAGTCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGGAAAGCCAACTGGCAGCTAAGATCGAGTATGAGTGCAAAATGAGGGGTGCCCAAAGAATGGCGTTCCATCCTGTAGTTGGTGGTGGAGCAAATGGCAGTGTAATACACTACTCAAGAAATGACGGAAGGGTCAAAGCAGGTGAACTACTGCTCATGGATGTTGGCTGTGAGTATCATGGCTACCTTAGCGACCTGACTCGAACATGGCCACCCTGTGGCAGGTTTTCACCTGCTCAGGAAGAACTATACAGCCTGATACTGGAGACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAAGCATTAACGAGATACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGATCGAGCCCGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCCGGTCACGAGGTCCTGACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MATAVRLLRRSLRGGESVLPMWKELDYFKEYAARLQSFREDDDAAAATLSEALYVVSMGTNDFLENYYAMAHAQAAEYSTAAAPRFLSASQNLVRLVANNTRSVDVGQPTPRSHPELLAEGEITPGITSDEYIFRRKKLLEVLPEKSLAIIASAEQQMMTDVVPYSFRQNGDYLYITGCAQPGGVAVLSEETGLCMFMPDTSKEDVVWQGQTAGVEAAENFFKADKAFPLSEMQKILPEMIERSKVVYHNVKTLSPSYKNLDSFRRASLNNKVKDIAYYTDELRWIKSKSEIGLMRESASIVSQSLLQTMLLSRTHREESQLAAKIEYECKMRGAQRMAFHPVVGGGANGSVIHYSRNDGRVKAGELLLMDVGCEYHGYLSDLTRTWPPCGRFSPAQEELYSLILETNKECIKLCKPGASINEIHNHSVKMLIKGFQELGILEKGKSIQYNYLNPTAIGHSLGMDIHDSVKLSKDKPLEPGVIITIEPGVYIPPVPILKENAPDRYRGIGIRIEDEVLITESGHEVLTASVPKEISHITTLMNMGSNSMMDAHELRAACS</aaseq>

Gene Sequence

<dnaseqindica>1..48#2158..2352#3391..3495#4331..4594#4673..4765#4895..5101#5670..5773#5951..6017#6091..6198#6280..6372#6458..6548#6638..6708#6936..7064#7174..7281#ATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGTACTCACTCCACCCCTCCCAATCGAATTCTACTTCCTCTCAACTTTTTTTTGTTGTTGCTGGGGGATTTCGTCTGGGCTGCTCCCCCAGTTTATATCAATTTTTCTTTTACTTGTTCTTGCTGTGATTTAGGTTTTTTTTTTCCATTCTAGGGTTTTGGAGTGGCGCCTCCTTTACGCGACGATTTATTTTTTGTGCGAGCTTTTCTTGACTATTTATGCGTGTGTTTGTGTGTGTTTTGTGCGAGCTTTTCTTGACTCAGTGCGGTTGATGCTTTTTTTTTTTAAAAAAAAGAAAAACTTTGGCGCGAGCTTCTCTTGACCCTGTGCGGGTGGTTGAGGAAGCATCAGCTTAAAGATGCAGTCTCGGAGCTCAGTTCGTTCGATTTCATCCTTGATCTTCTTTTCTTCGCTATGGCCTTCTGTCCGAATTGGATTGGGAGTAGCTCACCTAGTGCTGGAGTCTGGGTAGGTGATGTAATTTCAGTTTGTTAGTGTGGGTTTGTAGTACTCTTTATTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGAGCAATTCAGTCAGCAGACAAGATCCAGTAAAGCTCCATGATCACTAGTACAAACATTGTAGCTAAACCCGAAATGTTGCAGCTTGTATCTGCATTCACAACGCTGGTAATTCAGTGATTACCATTGTTCACCAGCCGTGCAAAGTTGTAATAACAAACTCATCAGACAAACTGGTGTCCAACCCACCATTGGACAAGACAATGCATCAACCGCATTACTCACAATAAACAGCAGCAAAATCAGCCATGGAGCCATCATAATTGTGTATTTCTAATCATGCTATTACTTCCTCAACATAAGAACATCCAACACAATCTCGCCATTAGCCTCCACTGTCATACTCCAATTCCTCGATTCTCCGCGACTAACAAGAAACCAACCACAGCTTCGTTCTATCCATAATTCACGGCGGTGAGTTGGAACAGTAACAAGAAACGCACCTTCCTGAGCAGGACGGCCTCGGGGAACGGCCCGGTGGCCTCGCCGGCCTTGGGCGCGAAGCTGTGGGTGTCCACCCTCTCCTCCTCCTCCTCCCCCTCCCCGCCCTTCCCCCTCCTCTTCTTGGCCGCCGCGGCCACCATCAACCGCCGCCCCCCGCCTCCAACTCCGGTGAACGCGGCGACCCGCTGCAACCTCAGCCTCAGCTGCTGCGGCTGCGGCTGCGGCTGCCGCGCGAGGAGGGACAGCGGCCGCGGCGCGGCGGTGGCCTCCATGGTGGCGGGCGAGGAGAGCGAGGTCGAGGTTCTCGCCGGGGTTCTTGGGTTGCGGGGGACGCGGAGCGAAATGGGCGGCGAAGAGAAGAGGATAAGATGGAACATGGGCCGGGCTGGCCAGTGGGCCCAGATGTTTCATCCCCAAATCAGCCCACTTCCTAATGGGCCGGTTCCACAAATGGGCCGACTCAGTTGAGCCCACCAATTAGGCAGTGGCAAGAATCTTAGTGATGGGCCCAACTCATAAAGGAATAAGTTCACTTGAGGTCCCTTAACTTGTTAACGAATCCGATTTTCGTCTTTCAACCGGAAAACCAGATACGACAGGTCCCTCAACTATCAAAACCGGTGCAGATGAGGTCCCTCGGCGGTTTTAGCTGACGTGACGCCTATGTGACTAATTTGACTTGGTATTCGTCCCACGTGACATTGACGTGGCGCTTACATGGCAAATCTATCCCCGAAAAATAATAAAAACCATGGGCCCACATGTCAGTTAAAAAAAAGTAGGCCCCACAAGTCAGTGCTCTCTCTCTCTCTCACTCTTCTCATCTGGACCCTTGCCGTCGACTTCACTCCGAGGCGTTCGGGCTGCCGCCGCTCGTCCCGGCCCTTGACCCGGGCGTCAACATGAGCAGCCTTGCCGCCGGCGCATGCTTCGCCTCCGCCGGCGCCGGCTACGACAATGCTACCTCTGATCTTTTCGTTAGCCTTCCATTAGAGCAAAACGATAGCTAGCTTAGCTACATTTTCATGGTGTTCTTGGGTGACATCACACATGGCATCCATGGAGTAATTTTGTGAGGTCGCGTCGTGCAGTCGGTGCTGCCGATGTGGAAGGAGCTGGACTACTTCAAGGAGTACGCGGCGAGGCTTCAAAGCTTCCGGGAGGACGACGACGCGGCGGCGGCGACGTTGTCGGAGGCGCTCTACGTCGTCAGCATGGGCACCAACGACTTCCTCGAGAACTACTACGCCATGGCGCACGCCCAAGCGGCGGAGTACTCCACGGCGGTGGCGTACGGCGACTACCTCCTCGGCATCGGCGCATCGCCGAGTCGTACTCATTCGTCCGCGAGCTGCACGCACTCGGTGCCTGCAAGGTCGACCTTAACGGCCTCCCGCCCATGGGCTGCCTCCCGCTGGAGCGCGCCACGGGGAGCGGCGGCGCGTGTACCGACGAGAAAAACACCGTCGTCGAGCGCTTCAACGCCGGCCTCCAGGACATGATCGCGAGGCTCAACGACGAGCTCGGCGACGACGAGATGATCGTGTACGGCGACGTGTACAGGCCGGTGGCCGCCGGCGGCGTACGGGGTGGAGAATGTAGGCAACAGCACCGTGCCCACGCGGGTCCACCGGCGGCGGCTCACCTGTGCCATCTGCTTCGACATGTTCGCCCCCGGTAGGATGAGATCGACGGGGTGCTCCCACAGTCCCACTACAACTGCATCGCTTCGGTGCCCGGACCCCTCCTGCTCGGTCGCCGGTGGAGGCGAGCACGGCGACCTTTCCTGAGGAGGGCACGGGGGCGGAAGGCGGTGCTGGAGAACAGCCACCGGAGGCCGAGGCAAGGGGGAAGCGGCGGCGGCGGCGGGAACATGCGGAGGCGGCGGAGGCAGGCACGGCAGGCGACGAGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGACTTCTTTTCAGACTTTTGATGATTGGTAAGTAGGAGTAATGGTATTGTCCTAGAGATGATAAATATTGAGGTGCTTGCTTTAGGCTTCAGTTGAGTGAGTTGTTGGTGCGAGATCCACTGTACCATGTCAAATTGTCAGCAATGCTTCGAGATTTGGTAATTGGTGAACTTTAGATGGATTGCATGTCTCATCCACCCCTTGTCAGTAAGTAGTGGCATTGGCAGCTGAATTAAAAAGACAACAAAATACTTTGATTTGATATCATTGATTAGTTCGTAGGCATGAACAAAATAATTATGTTTTTTTGTACAACGTTCAAATGTGTTTTATGCTTTGTCGGAATTTTGAACGCAGGCAGCACCTCGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTGATGTTGGCCAACCAACACCCCGATCTCATCCTGAGGTACTTCCTTGTTGGTAACATAATAGCACTAGCTGATGGTGTGAAATTGCAGTCACATTATAATTTATAATTTCTCTTTTTATGGCCTTCTGATTTTCCAGTGATGGTATTCAAACATTTGCTAGCCTATTTGGTTTCTGGCTAACTTCAGGATACAAAAATTAAAAGTACCGCTGTAACAATGTTAAGTAACTCCTGGGCCAATGGGGATAGGGAAATATGTGAAACCCCAATTGCAACAATGAACCAAAGCAGTGATCTAAGAAACTTTTGCAAGATCAATGTTTTGGGTGGCATGGCTAAGCACTGAACCTGCCTATTTGCCAATTCGGTGTCTTTTCTGATATGTGGGTGATACAATTCATTGGGCAGGCTTATTACCTATGAGAGTGCTCAAATTACGAAAATTTGATTTTTCGTAAGAGAGTTTCTTTATAATCACTATGCACAATAATATAGAATATGTGCAATTTTTATTTTCAGTCAGATAAAGCTTGGCCTTGATTATAGATCTTAGCCAATAAGTTCTATTTACTGAGAAATTAAAGTTGTGGGAATTTGTCCTTTTGGATTATAATTCTATAGATGCTTATAAGCTGGGTTAACCTATTCAAGTTTTGCAATTCTTTAGTAAGTCTCAATAAACTGCCTAGAAGCAAGTCTTAATAGGCAAAACAAGGCTTCTACTTGTTACCTTCCCAGTTCCAACAAACAAAACAATATCTAATATGTTATTTTCATTACTTTTATACTTTTATTAGTGTGCTTGTAAAAGAATCAAAGATAAGTCTACTTAAGAGTTATTATTTTATAATGCTGCAACAATATGAACCAGTTATTAGCTGAAGGAGAGATTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCTGCCAGAGAAGAGCTTGGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCATACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGTGTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAGGTAATGATGAGGTCTTATTTCCTTAGTACCATTTCTACTTAAGCTGCATAATTCTTAGAAATTGTAATATTGTGCTAGGATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCGGACAAAGCATTTCCACTTAGTGAGATGCAAAAGGTAACCTTATTTACCCCCCACCCCAAAATCCCCCATTACTTTTGAGCACTAGCTATTACCTCCTAATGACCTTCCTCTAGTGGTACTGCTTTATGACGCGCCATTGACATAACTACCATTAAAATGCAGATCCTTCCTGAAATGATTGAGCGGTCAAAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTTCGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGGTGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAGGTATTTGGTTAAACTTCTATTTTGTTCTTCTCGCATTGTTAGGAGGTGATGGCCTTACTTCATCAGTCCAGCCTTGGATAGAAAAAAAAACAATAAAGTGAGTTTGATATCTCATCTAAGAGAATAGCGCTGCTGGTTGTGGAAGTTGGGTCTTGATGTCGCTACAAGATTGCTGGTACAGAACTATATAGGCACATGCTGTACTCTTAGCCAATGAGATAATTAACTGATGATTTGATATGCGTAGAGTACTAACATGTAAGGACATACAATTTGTCCATGATTGTGCATGACACCATCTTGCACTTATTCCCCTGCCCCTCTGGATAGGCATGGCCCCATTTATTCCTCACATAATATGCCCACACCATTATTTGGTATTCCAACTAGACCACCTTAAAAACAGGTGTGTTGATATATTGCATTTAGAGTTTCTAGTTCAAGCTGACAGTATGCAATACAGAAGCTGCAGAATAAGACGAAACAACTAAATTTGCAAGCGACTTACTCTCTCACTGACCCATTGTAATTGTTCTATGTGCTGACATCATATTCACTACCTGGACAGTCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGGAAAGCCAACTGGCAGCTAAGATCGAGTATGAGTGCAAAATGAGGGGTGCCCAAAGAATGGCGTAAGCATTTTGTACTTCCCTGTATAATACTGTATGGTATCACATATTCTGCCGTACTAGTAGCATGATTCTATGTCCATTCACTTTGTTAATTAATAGATATTGAGTTAATATGCATGGGAAATATGAGGTCCATGCTCAGATGATTTACCTTTCCTTTTTATTGCCGTACCTTAGGTTCCATCCTGTAGTTGGTGGTGGAGCAAATGGCAGTGTAATACACTACTCAAGAAATGACGGAAGGGTAAACAGACTTTTCTCTTGTCGCACATGTCAGAGCTATCTTTCTTGTGAAGTTATTTTTAGCTATTTGACAGGTCAAAGCAGGTGAACTACTGCTCATGGATGTTGGCTGTGAGTATCATGGCTACCTTAGCGACCTGACTCGAACATGGCCACCCTGTGGCAGGTTTTCACCTGCTCAGGTAAATGCTAGATCTGTATACAAGTTAAGAAGTTTTATTTTTGTTACTTCTTCTAACTCCGAGTCCTCACCTTGACCACAGGAAGAACTATACAGCCTGATACTGGAGACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAAGCATTAACGAGATACATAATCATTCGGTATTATCAACATTACTCATTGTAGATACAAATTTTTATTTCACAAAAACTCAAAAGATCCAAATCTCAAATCTTCCATTTGCAGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTTCATACACTCTGTCCATTAAGATTTCTCCTTGAATGCAAGGGATTGGGCCCTGGGGACCAACTTAACTCTGTCTTGCTGTCTCCCAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTGTGAGTAGATGATTCATTCATTTCTGTCTAGTTATTTAATTATTTTTAAGCTTCTTAATGATCGTTGTATGCATGCATCTGGATAAAACACCCAACTAACCTCCAACAACAATTTTCATAAGAACTGTATTTTACCAAATATATTTCATGGCTTAAATAAACCAAGCCATCAACTTTTCACATCAGCTCAATCTCAAATGCTGACATGAGATCCTGTATGCGTGCAGATAATAACGATCGAGCCCGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCCGGTCACGAGGTACTCTCTTCCCTCCAATCATCTATAGTACAGCTTGGACCTTGGATTGGTAAATGCTGCTGTCAGGTATTGAAATTGAAAGATCATCATCCTGGGGTTGGCCTTGCAGGTCCTGACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037601

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA037601&oldid=53906"