BGIOSGA037614

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Revision as of 08:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037614| Description = BGIOSGA037614| Definition = Oryza sativa Indica Group BGIOSGA037614, complete gene.| tag = | tid = BGIOSGA037614-TA|...")
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Gene Name

BGIOSGA037614

Description

BGIOSGA037614

Definition

Oryza sativa Indica Group BGIOSGA037614, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA037614-TA

Ensembl Protein ID

BGIOSGA037614-PA

Length

3924

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18832998..18836921

Sequence Coding Region

18832998..18833258,18833442..18833609,18834383..18834453,18834667..18834724,18835340..18835519
,18836142..18836226,18836314..18836373,18836633..18836706,18836805..18836921

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18832998..18836921 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18832998..18836921 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCCGCCACCGCCGCCGCCACCGCCACTATCGCCGCCGCCGCCGCCGCCGCCGCGAAGCTCGCCGCCACCCCCGCCCCCGCCCCCTCCCGGCGCCGCCTCACGCTCCGCGGGAACCCCACCGCGCGCCGCTGCGTCGCCGCGATGGCCGTGTCCACCCCCAGGTCGGCCGCCGCCGCCGCGTTCCTCGAGCGCCGCGAGTCGGAGCGCGCCCTCCACTTCGTCAAGTACCAGGGCCTTGGGAACGACTTCATCATGATGGACAATAGGGATTCGGCCGTGCCGAAGGTGACGCCGGAGGAGGCGGCGAAGCTGTGCGACAGGAACTTCGGCGTCGGCGCCGACGGTGTGATCTTCGTCATGCCGGGGGTCAATGGCGCGGACTACACCATGAGGATCTTCAACTCGGACGGCAGTGAGCCGGAGATGTGTGGCAATGGAGTCCGTTGCTTTGCCCGGTTTATAGCTGAGCTTGAAAACCTACAGGGAACACATAGCTTCAAAATTCACACTGGCGCTGGGCTAATCATTCCTGAAATACAAAATGATGGCAAGGTAAAGGTTGATATGGGCCAGCCCATTCTCTCTGGACCAGATATTCCAACAAAACTGCCATCCACCAAGAATGAAGCCGTTGTCCAAGCTGATTTGGCAGTTGATGGCTCAACATGGCAAGTAACCTGTGTTAGCATGGGCAATCCACATTGTGTCACATTTGGCACAAAGGAGCTCAAGGTTTTGCATGTTGATGATTTAAAGCTTAGTGATATTGGGCCTAAATTCGAGCATCATGAAATGTTTCCTGCCCGCACCAACACAGAATTTGTAGAGGTCCTGTCTCGCTCACACCTCAAAATGAGAGTCTGGGAGCGTGGTGCTGGTGCGACGCTTGCTTGTGGAACCGGTGCTTGTGCAGTAGTTGTTGCAGCTGTCCTCGAGGGTCGAGCTGAACGGAAATGTGTAGTTGATTTGCCTGGTGGACCACTGGAAATCGAATGGAGGGAGGATGACAATCATATTTACATGACTGGTCCTGCAGAGGCTGTCTTCTATGGATCTGCTGTTCACTAG</cdnaseq>

Protein Sequence

<aaseq>MSSATAAATATIAAAAAAAAKLAATPAPAPSRRRLTLRGNPTARRCVAAMAVSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGSAVH</aaseq>

Gene Sequence

<dnaseqindica>1..261#445..612#1386..1456#1670..1727#2343..2522#3145..3229#3317..3376#3636..3709#3808..3924#ATGTCGTCCGCCACCGCCGCCGCCACCGCCACTATCGCCGCCGCCGCCGCCGCCGCCGCGAAGCTCGCCGCCACCCCCGCCCCCGCCCCCTCCCGGCGCCGCCTCACGCTCCGCGGGAACCCCACCGCGCGCCGCTGCGTCGCCGCGATGGCCGTGTCCACCCCCAGGTCGGCCGCCGCCGCCGCGTTCCTCGAGCGCCGCGAGTCGGAGCGCGCCCTCCACTTCGTCAAGTACCAGGGCCTTGGGAACGACTTCATCATGGTGCGACGCCTTACTAGCGCTTCCATTTCACTTTTCTTACAACCGATTTGTTGCTTCCCTTCAATTTTTTTAATCCCCTTTGTAATCAGTCGCTTCGTCTGCACGAATTAGAGCAGTCTCTGCTGCTTTAGACGCGGTGATTTCTGTATTTTTTTGATTTAGTCTTGGATTTTTTTTCTTCAGATGGACAATAGGGATTCGGCCGTGCCGAAGGTGACGCCGGAGGAGGCGGCGAAGCTGTGCGACAGGAACTTCGGCGTCGGCGCCGACGGTGTGATCTTCGTCATGCCGGGGGTCAATGGCGCGGACTACACCATGAGGATCTTCAACTCGGACGGCAGTGAGCCGGAGGTGAGCAATCCATTGCATTTCTGCAGTGCGTGATAGGAAATGTATTCGGGTGTTGGTGTTTTGTGATATCCGTAGTGATTCGTCAATCATAAATGCAATGTGGATGATATGGACTAATCTAATGTTAGCATGATCCTCATTAGGTAGGATAGTGGAAAGAAAGCGCAAAAGCTTTGCACGTTCTCAACTTCTCATAAAGTTTCTTGTGTCCCTGAATTGTTAGGCGGGGATACTTAGCCTGAAAATTAACTGTGCAAGTGTGTACTAGCTGCTTATAGCTCTCCATGTAGATTAGGCCTTGTACTAGTTTAATCCACACTCAGAATAGGTCATAGGGAACTTAAGTGAAATCTGCTGGTACTCTATACAATGCTGGGGATCTAATTCGTTGATTATTCATTATCTTTAATCTGTATGTGTATGTCTTAAGTGTGTATTTTTACTCTATTACATTTTAACCAACCCCTACATGTTATTCATTATCTTTATTCTGCATGTCTTAACCTTGTTATCTTGTGACATTCTAATTGTTATCATGTTACCAACCCCTACATCTAAAGCAGAACTTTAGTCTATGTACTTTCAATTAGATATATACTCCAGTGGAAATTAAAAATGGACTAAAATTTCTTTGAGCTTGTTTTTGTGAACTATGCATAAGAAACCATCCATTTGTTTGTCAAAGTGGTTGATTATACTCTATGTTTCTCTATTCAGCTTGTTAGTGCTGAATTATTCTCACATGCCTTATGTATTATTTCTATTTATTTCAGATGTGTGGCAATGGAGTCCGTTGCTTTGCCCGGTTTATAGCTGAGCTTGAAAACCTACAGGGAACACATAGGTAATGTACTACTCAATATCCTTTAGTAGGATTACAAGAATAGTGAACTTCAAACTATCATTGAAAATGCTTAAAAAATACCTATTATCATGATATTAATCTTAAAGTACTTCATGATTGGATTGCAACCTGTTCTTTGCCAACGCCAATAGAATTATGATATGGATGAACCATTCTTTGTAATGGAGCTGAAGTTACATTCTTGCATTTCAGCTTCAAAATTCACACTGGCGCTGGGCTAATCATTCCTGAAATACAAAATGATGGCAAGGTAAATGCCTTTTAGTTTTTTAGTTATTGTTTACTTTTAAGCATGATAATGCCTTTTGAATTTGAAGGTATAAACCACTGTAGTTTGCCATTCACCTCCCTCAATCGATTTTATTTATATATCTGCCATTATATGGTTTTTGTTTCTTGGTCTGTATAACCTGCCTGGGCTTGTATGCTTCTTGCAATTTACTAGCAACATGATACTTTATACCATTATGAAGGACTCGCACAATTGTTCATAGATTCATTTAAATACAGAAAAACCTCATGAAGTCATACAGTTTACATTTCTGTACTTCTAGTTGCCATTTTGTTCTTATGACTTCAACTTATATTTCAGTAAGTATGCCATAACAACTTTCTTAAGTCATATGGCAAGCATGTCGTACTGATGGTTTCAGTCTAGCATACTGTTCTAGCTCTTGCAATTTTATTGGATGTGTTAAAAGGAAATATGTTGGCCTGAGCTTTCTTAGCTCCAGTAGTCTTGATAATACACCTATCCTGTCAAGCGTAAGCCATTAATTGACTGATTCATTCTTGTTGAATGTGATTCCCAAAAAGTATGAAATTATTTTATTGATAGATCCACTTGCATTTATCTTGTTCACAGGTAAAGGTTGATATGGGCCAGCCCATTCTCTCTGGACCAGATATTCCAACAAAACTGCCATCCACCAAGAATGAAGCCGTTGTCCAAGCTGATTTGGCAGTTGATGGCTCAACATGGCAAGTAACCTGTGTTAGCATGGGCAATCCACATTGTGTCACATTTGGCACAAAGGAGCTCAAGGTAATTGACTTGCAAGTTCATATTCTCGTAGTTTTAAATTACATTCTGTCAAAACCGTTAATATGCCAAAATATTTCCTATACAAATATGTTAAATTGTTGCCTATTGATTCATGTGGATCTTGCAATTATTCATTTATGGGGATATCATGGCTTATTAAAACATTTCAATATTTTTTATGTTTCCATACAGGAGTGCTTGCTTAGGCCCAAGGTCTACAGTATAGAACTCCAGATCAATTTAACGTGTTTTAATCCTATTATCTTTTGTTTAGTTTTTAGTTAAATTAACTGCTGATCCTACCAGTTGGCTTTGTGATCCACTTGTTCATTACCACAAGATTTGCTAATATTGTTGCTTTCACTTCCAATAAATGTTTGCACTTTCTATGTTATATACTTCATGCAAGCTTGAGAAATGTCTCTAGATGCTTCAATACGTGATTGCCTCTGTTTATTGGCCCATATGTTCTGATATAGCCAACAAGATCCCCCTAGCAACCATAAATATTTTTTTCTGCTAGTGATTAGGTTCCTGTGTTGTTTGAACTGTATATATCCTAGCCTATCCAGGTCCAGGCTGTCCATATAATAATTTATTGTTGTCTTGGCTGGAAAAACAGGTTTTGCATGTTGATGATTTAAAGCTTAGTGATATTGGGCCTAAATTCGAGCATCATGAAATGTTTCCTGCCCGCACCAACACAGGTTACTCTTAATTATTATAGAACCGTATGCCTTCTATTCATACATATTCTTGCATTTGAGTTTACTTAAATTAATTTTCTTCTGCAGAATTTGTAGAGGTCCTGTCTCGCTCACACCTCAAAATGAGAGTCTGGGAGCGTGGTGCTGGTAACTGATGTTCCCTTAATCTTGATTTTTATAGGATATATGCACTGTGGTTTAATTTCAGCATGTTCCTTTTTTTTTCATGCATATATCTTTGTCTGTTAGGAATGTTGCATGTCATATAGTCATAGCATCATAGGTGTTGCTGTGTCATTAGCACCACAACATTAGTGCATTCTGTAAATAACTGTAGTGTATGTATGTGATTCAGTGGTATCTCCTTTTATATTCTGAGGTATACAATATATGATTTTGACTGTAGGTGCGACGCTTGCTTGTGGAACCGGTGCTTGTGCAGTAGTTGTTGCAGCTGTCCTCGAGGGTCGAGCTGAACGGGTTTGTCCTTTCTACTGTTTGTACTTTGCACTGTCAATTTCATCTCTATTGTACCTTATATCCTTATCTGTAGTTGGCCACATTTTGTTGGGATACAGAAATGTGTAGTTGATTTGCCTGGTGGACCACTGGAAATCGAATGGAGGGAGGATGACAATCATATTTACATGACTGGTCCTGCAGAGGCTGTCTTCTATGGATCTGCTGTTCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037614