Os12g0211100

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0211100| Description = Conserved hypothetical protein| Version = NM_001189908.1 GI:297728946 GeneID:9271142| Length = 6422 bp| Definition ...")
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Gene Name

Os12g0211100

Description

Conserved hypothetical protein

Version

NM_001189908.1 GI:297728946 GeneID:9271142

Length

6422 bp

Definition

Oryza sativa Japonica Group Os12g0211100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5821651..5828072

Sequence Coding Region

5821651..5821969,5822401..5823137,5824325..5824382,5825458..5825692,5826290..5826464
,5826532..5826577,5827232..5827437,5827669..5827743,5827825..5827919
,5827991..5828072

Expression

GEO Profiles:Os12g0211100

Genome Context

<gbrowseImage1> name=NC_008405:5821651..5828072 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5821651..5828072 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggcggcggcagcgattgccggcggccagcctccgacgatcacgaggggacggcggttgccagtctccctagctccaggaagaggaaggcggctaaggatttagaggaggaggaggaggatttgcagccggaggaggaggcgcgtccgccggcgccgccggcgaagggtcggtcgtgtctgccggcggcgtgccatgaggacggcatcatcccggcatttgtgatcccgggcagcaagcatcgcgacgggtccatctacaggacggatgcgcactactggcacggcctctaccacctcgacgataccagcgaaactcgcctggaaccgatgacaccatcatattcagagcaggactgcaggccatgcgtcaccgattgccagtggcacattggttgctccatgatgcagatcttctccctcgagctagccgaaatctcaaatttcgccaccggagctgctggtgccggtgctattcagctgtatgggttcatggctgcgcgggatcttttggacccgctgcgaaactacgtcttcaaccgcaccagggacgatccgttcaccatccgcgacgtctcctatccgtttatacagatgactggccctaagaggggcatcacgatgaactcccgcgtgatgatcgagtacgacctgaggatcaagaggggagagaatgaacaagatgatctggtgctcatcgacggggctgccaccttcagcgagataacgaatttcataccgtacatttatcgcatccatggggattgcggcatggcggtggacataacgctagcacacttcatccttgcaattgaggcaacgttgcaagttcgaatatatgaactaaaggatggctgtggcagcctaaacttgactataacttgtcgtgttagtcatatgaccccacaaattaagctctttcaaggtcccattgataagctacgtgaccaaaataggtttgtggttgttgcaacactgaacactttgatgattacagagttcaagctaacacatcagcatggctcaatcagtcggagatttgagtccagggttgtggtgaatgaaatgtgggcgtcttgggaactaccggagggctcaatttctgctggagctgttttgaattgcaagctctatgacttctgtggtgaagagagagacctttctgagatggatgctgctcatctgataagagaatttgatattactgagcttgacaaggtaatcaaggaagcaaaactaaaccttgctcctggtccatatggcttccctgcacaattctatagacaattctggccacagctgagacagggtttgtttaagatgctgcaactgcttcatgatgaagaccaaaagcgccaatatcctaacagggctggtcccacacctcttccctgggggattgactcacctacaaatgcagatgatacagtgatttttatcccataccttgctgtgaccaagttccttctttactgctttgaggacatgtctggtctaaagattaactatgataaaggcaaggttcttcccaatgaagtatctagttttacccatcagtccacaaaagaaggtcttttggcccggtggaggtggagtgggaaaaccttgggcaacgaatggctgaaatctcttactgatgaggaagacatgatgctttggccttttgagaagaacaaatgcttttctacaaagtcttgctacaaaatgctaaactttcatggggtgaaagatatgagaggactagatatttggcaagagccaatgccccagaagtggagtaggtcgatgcgcaaaggagaagaagctcaagcggagtcgatggcggtgaagatcctagaagttaccctgatccctgttagagttgcagcagttaagttggttggtggccggtgttttggccctgttccctgtctggcaaagctggtgttgtccccagagaatctggagatccactggtcaattggttcgactcttgaaggccaggagatctcaaccacagcaatggtgaaactaggagcaacataa</cdnaseq>

Protein Sequence

<aaseq>MEGGGSDCRRPASDDHEGTAVASLPSSRKRKAAKDLEEEEEDLQ PEEEARPPAPPAKGRSCLPAACHEDGIIPAFVIPGSKHRDGSIYRTDAHYWHGLYHLD DTSETRLEPMTPSYSEQDCRPCVTDCQWHIGCSMMQIFSLELAEISNFATGAAGAGAI QLYGFMAARDLLDPLRNYVFNRTRDDPFTIRDVSYPFIQMTGPKRGITMNSRVMIEYD LRIKRGENEQDDLVLIDGAATFSEITNFIPYIYRIHGDCGMAVDITLAHFILAIEATL QVRIYELKDGCGSLNLTITCRVSHMTPQIKLFQGPIDKLRDQNRFVVVATLNTLMITE FKLTHQHGSISRRFESRVVVNEMWASWELPEGSISAGAVLNCKLYDFCGEERDLSEMD AAHLIREFDITELDKVIKEAKLNLAPGPYGFPAQFYRQFWPQLRQGLFKMLQLLHDED QKRQYPNRAGPTPLPWGIDSPTNADDTVIFIPYLAVTKFLLYCFEDMSGLKINYDKGK VLPNEVSSFTHQSTKEGLLARWRWSGKTLGNEWLKSLTDEEDMMLWPFEKNKCFSTKS CYKMLNFHGVKDMRGLDIWQEPMPQKWSRSMRKGEEAQAESMAVKILEVTLIPVRVAA VKLVGGRCFGPVPCLAKLVLSPENLEIHWSIGSTLEGQEISTTAMVKLGAT</aaseq>

Gene Sequence

<dnaseqindica>1..319#751..1487#2675..2732#3808..4042#4640..4814#4882..4927#5582..5787#6019..6093#6175..6269#6341..6422#atggaaggcggcggcagcgattgccggcggccagcctccgacgatcacgaggggacggcggttgccagtctccctagctccaggaagaggaaggcggctaaggatttagaggaggaggaggaggatttgcagccggaggaggaggcgcgtccgccggcgccgccggcgaagggtcggtcgtgtctgccggcggcgtgccatgaggacggcatcatcccggcatttgtgatcccgggcagcaagcatcgcgacgggtccatctacaggacggatgcgcactactggcacggcctctaccacctcgacgataccagcgaaagtaagcaaagcatcaagcatctccaattccccccaattaatcccactactcctcatctgctctcaaagttttcatcaatttaacagttatctgttctccaccttttgattgataaatctgttctccattttatattacaagtcatttgactttttctttagtcaggcttctttgcgttttaacaagtttatagaaaagtttaccaaacatccaaaacaccaaattaatatcgtaaaatgttgcattgaatattttttgttaatatgtttgttttgtgttggaaatatcgttatattctttcataaacttggtcaaatttaaaaaaattgagtagaaaaaaagtcaaagcgatttataatatgatgaaactgaaacggagggaggagtatatactaatcactggttacttaatcgattcattccatcatcagctcgcctggaaccgatgacaccatcatattcagagcaggactgcaggccatgcgtcaccgattgccagtggcacattggttgctccatgatgcagatcttctccctcgagctagccgaaatctcaaatttcgccaccggagctgctggtgccggtgctattcagctgtatgggttcatggctgcgcgggatcttttggacccgctgcgaaactacgtcttcaaccgcaccagggacgatccgttcaccatccgcgacgtctcctatccgtttatacagatgactggccctaagaggggcatcacgatgaactcccgcgtgatgatcgagtacgacctgaggatcaagaggggagagaatgaacaagatgatctggtgctcatcgacggggctgccaccttcagcgagataacgaatttcataccgtacatttatcgcatccatggggattgcggcatggcggtggacataacgctagcacacttcatccttgcaattgaggcaacgttgcaagttcgaatatatgaactaaaggatggctgtggcagcctaaacttgactataacttgtcgtgttagtcatatgaccccacaaattaagctctttcaaggtcccattgataagctacgtgaccaaaataggtttgtggttgttgcaacactgaacactttgatgattacagagttcaagctaacacatcagcatggctcaatcagtcggagatttgagtccagggttgtaccacatggaagtatgtctcattgcgccaagtttgcggatttagccactataggtgtggagatcttttggtcaatcttacccacttcgctacaagaaggcttttgagccttctactttgttacattctatttattttcaggcaaaaaatcacctacctgtaaatagctaagagcaatgcaagttttttattaggatttgtgccatatatattgccatatgaaccagaaccaaccaaggcttcatgtgtatgtcaattgttgggcaaaccttgccatatgagcaaaaaatatttttttttctttcaattgattttgtggctgttgaatttgcacggagattgggatatcaaccacaacaagcacttttagcagtgattacgactccttccagggcaccagtaagttgatgatgtgatatacctaccttttttgttcttctctttgctttggatttcttgttctaacttcactcaatcagctaggaagaatatttatgcaaatttatattttcctgcctctaccctactccatattgctactagataatactatctccatattttaatgtatgacgccgttgactttttgtccaacgtttgaccattcgtcttattcaaaaaatttatataattatcatttattttattatgacttgattcgtcatcaaatattctttaagtatgacataaatatttttatatttacacaaaaaatttgaataaaatgaatggtcaaacgtttgtcgaaaagtcaacggcatcatacattaaaatacggagggagtagtattttctatctttgtgctcgaatactggctggctcatgttctattgacacatggacctaaaagagtaatatttgacaagaggctggctaaatacctggtggctgaactatgcaacacatttagcatgtcacacaagtggtgtgtttcctaatacactcaagcctgtacaacaaattctgcttcaacaagtaactagaacaaaaattcacctgtcgatgactacatatgtttggtaaagaagcatctgaaatattccatattagtaggtgctaatacaacttggctgttcatttagtgtaatgaattctggcagattggtgtgaaatatgccacagtttctgcttgtttggcttttctttttattttggagttgcagaattaggtgtaataatttgcaggtggtgaatgaaatgtgggcgtcttgggaactaccggagggctcaatttctgctggaggtgagtagtaaataaattaatcacaaattcatggttggtcctacacgaaatgatgggattggggaggggaacgttctatgcattttatggaaaattgtgacaacttctacagtgcccgtgcactgtttgatgttttgtctgaaagggagagttttgtttggaacatattttatgttacaaaggagggaattatgactactagttcgtgatgcctgctgcgttgcaattgctgggcaatctcatgtcaaattgctacttggcagttcaccagttgacgagttgactactttggatggaattgcaaagagtatgagtggaaatgatccttttcttattattaattcaccttacagttcataggaagttagacagtcataggacttaatgatatataaaagtatcatagttttgtggtttatatggcacacaattcattttaaactttgttgctgaagcatggttatgcatatgaaatgtgtttttccttgtaagatgaaatgacagacaaataagtgtatatgcatgttctgttgtctttctataaagctgggaagatcttttgagcgacatgtggtaaaaaaacagtgcgtatgcatatcccgataaactaacagaaaatcattattttgggcatgcatttataagattcattttgggatgaatctctttgtagctgaatatgattaatttgggctccacataattaatctcctatcctaatcaccatgggaatgatcctttacataatcacatgattatgcaactttcctgctaatgtaggttgtccctgttgtggacggaaagggaaatgttgagttatcagtaacaggctttacgctattcctgataataaaaaggaatcctcaacaatgaagagattttggtaagcaactatctttgttgataactgataaggccgtataaacatatatttccgacaaattagtactggtgattcatcttaacattgctttgacagtacgtgcattttactgataacttcagtcaaaatgtctatgttcttacaaccaatctgcactgagcctcctgtaaccatagtgtatttcccatacagctgttttgaattgcaagctctatgacttctgtggtgaagagagagacctttctgagatggatgctgctcatctgataagagaatttgatattactgagcttgacaaggtaatcaaggaagcaaaactaaaccttgctcctggtccatatggcttccctgcacaattctatagacaattctggccacagctgagacagggtttgtttaagatgctgcaactgcttcatgatgaagagttagacttaaggaggttgaactttggtgccattaccctaatccctaaaattccctcccctacctcaatcaagcaattcagatccgtctatgggctaaatggttccctgaagtatcagcaaagttctgacaaacagactgtctgtagtggctccatccaccgttgcctcaacacaaactgcttttattccaggcaggttcatacttgaaggatgtgttattctacatgaggtgatgcatgaactaaggagaaataaacaaagaggcgtgattctgaaactagattttgagaaggcttatgacagagtgagatggggattcgtttatggggtgtttgacagtgattctgaaactagattttgagaaggcttgacagagtgagatggggattcgttatggggtgttggacagagcattttcatgaaaaatggattcactgggtgaaaagctgtatagaaggtggaaaagtctgtatcaacataaatgggtagagatctaatttttttcagcacttacagaggcctcaggcaggaggatcctatctctccgctgctcttcaattatgtgagtgatgcgttgatccagctatttgatgcagccaaaagcgccaatatcctaacagggctggtcccacacctcttccctgggggattgactcacctacaaatgcagatgatacagtgatttttatcccataccttgctgtgaccaagttccttctttactgctttgaggacatgtctggtctaaagattaactatgataaaggcaaggtgtttgctgtggggttggagtaaaatgagttgaacagagttgctaacatgctcaactgccctgcaggttcttcccaatgaagtatctagttttacccatcagtccacaaaaggtagggatctctgagttaaaattcctaccacataagttagaaaagatgttctcgtcaaaaaaaagttagaaaagaggttgggtacatggaagtcaaatttctcatctggggggagagatatccttatcaattcttgcctatcatccattccctcctatacaatgggtttctatcttttgccagaatgcattcatcgcaagatcaacacagttaggagcaggttttaatgggcaggtaatggctccaagaaaaaaaatacatgatgaaatgggaccatttatgcagtcataaagagtttgggggcatggggttcacagaaacaatgaagtataacacgctctgttatccaaatggatttggaagctggaatcaggggacatgagcccctgtatagagctgttaagaagaaaatatctacagatcaaggggtttttccaatctgaaaaggagggagggtcacaattttgtagaagcttgcactcaattaaattctgggtccaaaacaactctgaatggaaattgggataaggaactcatatctctttctggtcagatgtttggactgggtcctgtcctttgaaaacaaatctgtaaccaacaagagattctggtgcctgatgctctggcctcttggcctgaggggatttctttcagaaggtcttttggcccggtggaggtggagtgggaaaaccttgggcaacgaatggctgaaatctcttactgatgaggaagacatgatgctttggccttttgagaagaacaaatgcttttctacaaagtcttgctacaaaatgctaaactttcatggggtgaaagatatgagaggactagatatttggcaagagccaatgccccagaaggtaaagcactttgtatggcttgcttggaaagataagattcaatccacctcctatctggttaagaagaattgggaaggatctgagagatgcattctttgttctgagatagaagatgcctggccagaaaatgaatgaaaagggtcttatgctgctcagctgctgggtgcagcgaacaaaatcttgtccacacctctaacccttgtttttcgtgtgattttcttcctttggcagtggagtaggtcgatgcgcaaaggagaagaagctcaagcggagtcgatggcggtgaagatcctagaagttaccctggtttaggctgagcagggttttggagccttgctgttctttgccagaacctaaactcgttttgtttttgtttctcttcctgagatccctgttagagttgcagcagttaagttggttggtggccggtgttttggccctgttccctgtctggcaaagctggtgttgtccccagagaatctgtggaaaactctgaaatttcagctttgtccgtttatgacatggcatttgaacattgtttccttgatcacagggagatccactggtcaattggttcgactcttgaaggccaggagatctcaaccacagcaatggtgaaactaggagcaacataa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0211100, RefSeq:Os12g0211100