Os12g0211400

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0211400| Description = DNA glycosylase family protein| Version = NM_001072935.1 GI:115487831 GeneID:4351781| Length = 2630 bp| Definition ...")
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Gene Name

Os12g0211400

Description

DNA glycosylase family protein

Version

NM_001072935.1 GI:115487831 GeneID:4351781

Length

2630 bp

Definition

Oryza sativa Japonica Group Os12g0211400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5848811..5851440

Sequence Coding Region

5848811..5849215,5849335..5849394,5849856..5849972,5850066..5850163,5850523..5851073
,5851171..5851274,5851351..5851440

Expression

GEO Profiles:Os12g0211400

Genome Context

<gbrowseImage1> name=NC_008405:5848811..5851440 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:5848811..5851440 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagaaccccaaggcggccaagaaccgccgccccacgacgcggcgacctcgcgccgccgccgccaccgccaccgccaccgcctccgcctccgcggacatcgaggacctggcgtcgccgtccgggtgcagggcggtagcggggcccaccacggccgccgcggcggtgcgcgcggagctgctgcggtggtacgacgcaaaccggcgcgacctgccatggcggcgcgccgcggagccgccggcggggagcgggagcgggcgcggcgaggagcagagggcgtacgcggtgtgggtgtcggaggtgatgctgcagcagacgcgggtacccgtggtggtcgactactactcccggtggatggcccgctggcccaccgtggacagcctcgccgccgccacgcaggaggaggtgaacgagatgtgggcggggctcgggtattaccggagggctcgatttctgctcgagggagcaaaacaaattgttgaaaaaggcgagttcccttgcacagcatcaacactccgtgaagttcgtggcattggggattacacagcaggagccattgcttccatagccttcaatgaggttgtccctgttgtggacggaaatgttgttcgagttattagcaggttttatgctattcctgataacccaaaggagtcctcaacggtgaagagattctggcagctcactggtgaactggttgacccttcaaggccaggagacttcaaccaagcaatgatggaactaggagcaacactctgcagcaagacgaagcctggttgctctcagtgccctgtctctagccactgccaagcgctcgcactttccagccaaaatgcttcagtcaaagttacagacttcccacgagtagtcccaaaagccaaaccacggtctgattttgctgctgtctgtgttgttcaaatttcacaaggctttggtgaaggtatagcagaggcagagggcaaagataatctttttctactgatcaagaggccagaagagggccttctcgctgggctctgggagttcccatctgttcttgtgaacgaagggaagactgatacgctgaataggagaaaagagatggacaaatatttgaagcagcttcttagcatagatgttacaaggagatccagtgtgatcctcagggaagatgttggccaacatgttcacattttctcacacattcggctgacgatgtttgttgagctgatgattttgaacctcaaagatgatggggaggaattatgcaaggagggacaagatagcaccaaactgagattgattaacgaaaatgcagtccagtcgatgggattgacatcaggaatccggaaggtgtacaacatggtcaaggtcttcaaggagaaaaggctgaaagagcagagccaagtgccgacgaggaaaaggagtagacggctgaaataa</cdnaseq>

Protein Sequence

<aaseq>MAKNPKAAKNRRPTTRRPRAAAATATATASASADIEDLASPSGC RAVAGPTTAAAAVRAELLRWYDANRRDLPWRRAAEPPAGSGSGRGEEQRAYAVWVSEV MLQQTRVPVVVDYYSRWMARWPTVDSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQI VEKGEFPCTASTLREVRGIGDYTAGAIASIAFNEVVPVVDGNVVRVISRFYAIPDNPK ESSTVKRFWQLTGELVDPSRPGDFNQAMMELGATLCSKTKPGCSQCPVSSHCQALALS SQNASVKVTDFPRVVPKAKPRSDFAAVCVVQISQGFGEGIAEAEGKDNLFLLIKRPEE GLLAGLWEFPSVLVNEGKTDTLNRRKEMDKYLKQLLSIDVTRRSSVILREDVGQHVHI FSHIRLTMFVELMILNLKDDGEELCKEGQDSTKLRLINENAVQSMGLTSGIRKVYNMV KVFKEKRLKEQSQVPTRKRSRRLK</aaseq>

Gene Sequence

<dnaseqindica>1..405#525..584#1046..1162#1256..1353#1713..2263#2361..2464#2541..2630#atggccaagaaccccaaggcggccaagaaccgccgccccacgacgcggcgacctcgcgccgccgccgccaccgccaccgccaccgcctccgcctccgcggacatcgaggacctggcgtcgccgtccgggtgcagggcggtagcggggcccaccacggccgccgcggcggtgcgcgcggagctgctgcggtggtacgacgcaaaccggcgcgacctgccatggcggcgcgccgcggagccgccggcggggagcgggagcgggcgcggcgaggagcagagggcgtacgcggtgtgggtgtcggaggtgatgctgcagcagacgcgggtacccgtggtggtcgactactactcccggtggatggcccgctggcccaccgtggacagcctcgccgccgccacgcaggaggtgagattagggaaagatctctcctccactatcgctggaaaaaaaatgcaatgtttgatgaggtgtgtgcgagagtggtaatgaagttgtggatttgtggttgccgccgattgttgcaggaggtgaacgagatgtgggcggggctcgggtattaccggagggctcgatttctgctcgaggtgagtagcgagttgattgatcacgaattcatggtcgaaacgacggggattgggatgaggttcacttgttcagtgcgttctgtggagcgcccatgaaccgtttgatgttttgtccaaaggagagattttatttggaacccgttttgtgtctgacagaggaggggattattgctactagttcgtgatgtctgctgcattgttttcgctggcaatctcatgtgaagttatcagttcatctggtgaagatttggctagtttgggtggaagaactgacaagaacattagcagaaatgttttttccttgaaagatgaaatgaatgaataagtgcctatgcatctatgtgcatggtgctgagcaactaatagaaatgttgctacggagcaaagcattattctgggcatgcatttttggttcaatttctttatagctcaataatatttaaccttttgttgcaaagtagggagcaaaacaaattgttgaaaaaggcgagttcccttgcacagcatcaacactccgtgaagttcgtggcattggggattacacagcaggagccattgcttccatagccttcaatgaggttgtgctccacataatttatatctgattcaaatcaccatgggtgtgatcctttacatactcacatgattatgtaactttcttgctaatgtaggttgtccctgttgtggacggaaatgttgttcgagttattagcaggttttatgctattcctgataacccaaaggagtcctcaacggtgaagagattctggtaggcaactacctctgttgatcacctataagacataggccatggcttgcactaaaatagcactgagtttggtaattcatctcactgcattatcattattttgcacagcactggcattatactgatatacaatttcaatcgaaatgtgtatgttcatacaaccaatttgcattacaatttacaagctcaatttgcagttctgtgatccccatccaagtgcaaatgttatctgtatatggctgtatttcgaactgtcctatcgtaccactttccatacagctctttctgaattagaagctttatactgaaatagaacttccaaattgtatggcctttgaacatcatttccttgatcacaggcagctcactggtgaactggttgacccttcaaggccaggagacttcaaccaagcaatgatggaactaggagcaacactctgcagcaagacgaagcctggttgctctcagtgccctgtctctagccactgccaagcgctcgcactttccagccaaaatgcttcagtcaaagttacagacttcccacgagtagtcccaaaagccaaaccacggtctgattttgctgctgtctgtgttgttcaaatttcacaaggctttggtgaaggtatagcagaggcagagggcaaagataatctttttctactgatcaagaggccagaagagggccttctcgctgggctctgggagttcccatctgttcttgtgaacgaagggaagactgatacgctgaataggagaaaagagatggacaaatatttgaagcagcttcttagcatagatgttacaaggagatccagtgtgatcctcagggaagatgttggccaacatgttcacattttctcacacattcggctgacgatgtttgttgagctgatgattttgaacctcaaaggtaatcatttgttgtccatactagcagttattcatttctgtttagctacattctattattaatttccacatgtagttgcctaatttctttactgtagatgatggggaggaattatgcaaggagggacaagatagcaccaaactgagattgattaacgaaaatgcagtccagtcgatgggattgacatcaggaatccggaaggtacgcacaaattcaatgtggtaaaaatatttttcctcagagttgattaaaatttttagatgaattttcacttcaggtgtacaacatggtcaaggtcttcaaggagaaaaggctgaaagagcagagccaagtgccgacgaggaaaaggagtagacggctgaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0211400, RefSeq:Os12g0211400