BGIOSGA037649

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Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037649| Description = BGIOSGA037649| Definition = Oryza sativa Indica Group BGIOSGA037649, complete gene.| tag = | tid = BGIOSGA037649-TA|...")
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Gene Name

BGIOSGA037649

Description

BGIOSGA037649

Definition

Oryza sativa Indica Group BGIOSGA037649, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA037649-TA

Ensembl Protein ID

BGIOSGA037649-PA

Length

2387

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19158606..19160992

Sequence Coding Region

19158606..19158797,19159225..19159258,19159832..19160035,19160472..19160992

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19158606..19160992 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19158606..19160992 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTCGATGGAGGCGGAGACGAGTCGGCGGCGGCGGCGATGGCTGACCCCGGCCGCGGGAAGAAGAGACCGCCTTCCCCCTCAACTCCTCCGACTCCGAGCGACGACGGGGAGGACTCCGACGACAGCTGCGCGGTCAGCGACGAGGAGGAGGAGGAAGACGAAGACGAAGGCGAGGAGGATCAGAAGTTGTATGAACTATCAAGGTGCGGCGCAGTGCAGTGGATGCACCGCCCATTTACGGTTGATGATTTTCCAAGGCTTAGTAGTGATCATTCTGCGCAGACTGAAGCGCGGTATAGATTTCCAGATCTTCGCCTTCAAGGCCCTTTGCCACTCATTCTTTTCCGTGCCTTCAACGATCCTCTCACTGACAAACGCAGGCATNGGTTTGGTTCTGATTACCGACTCGATGACGAATCTGAAAACTCACCTGAGGCTGAGGATGAGCCCAAAGGTGACACATTGATTGAAGGATGCACTGAATTCACCAACATTTTAAGATCAACATCATTCACCAAAACTGTTCGTCTGTACGGTGAGAAGTGTGGATTGGATTTGAAGTTTGCTCTGCTGGTTAATGCAGTTCAAGCTACAGTTGATGTTGAGATTATACATTCACCTCCTTGTGGCCTTAATTTGAAGTTATATGCCAAAACTAGTGGCTTCAGCGATGTGATCCGTCTCTTCCAAGATGCTGCACAATCTGGTCATAGAATTAGTTCTGTTGTGGCGGTGGTGCGACGTAGTCACCTTGATCTTTGTATCGAAGGGTCTCCAGCAGGTATTGGTCTTGGTGAGAAGCTGCCCCGTGTAAGATGGGAGCACAGATTTGGTGCTGGTTTTCATGGAATTGAAGATGAAGTGGTGAAGCTTGGTGATTTTAGCACAATTTCTGTGAAAGTCACCTGGAAAGCTGTCGGCAAGCGTCTGGCGCCGAAGGGATAG</cdnaseq>

Protein Sequence

<aaseq>MEVDGGGDESAAAAMADPGRGKKRPPSPSTPPTPSDDGEDSDDSCAVSDEEEEEDEDEGEEDQKLYELSRCGAVQWMHRPFTVDDFPRLSSDHSAQTEARYRFPDLRLQGPLPLILFRAFNDPLTDKRRHXFGSDYRLDDESENSPEAEDEPKGDTLIEGCTEFTNILRSTSFTKTVRLYGEKCGLDLKFALLVNAVQATVDVEIIHSPPCGLNLKLYAKTSGFSDVIRLFQDAAQSGHRISSVVAVVRRSHLDLCIEGSPAGIGLGEKLPRVRWEHRFGAGFHGIEDEVVKLGDFSTISVKVTWKAVGKRLAPKG</aaseq>

Gene Sequence

<dnaseqindica>1..192#620..653#1227..1430#1867..2387#ATGGAGGTCGATGGAGGCGGAGACGAGTCGGCGGCGGCGGCGATGGCTGACCCCGGCCGCGGGAAGAAGAGACCGCCTTCCCCCTCAACTCCTCCGACTCCGAGCGACGACGGGGAGGACTCCGACGACAGCTGCGCGGTCAGCGACGAGGAGGAGGAGGAAGACGAAGACGAAGGCGAGGAGGATCAGAAGGTACAGGATGATCACTATAATTCTTTTACTATCTGAATGGCTCCTGAATATTTCGTTCGACGAGCCTCTGTAATCTTGTTCAGTTTTCGGTTTTTAAATTTTCCCCCTCTTTGATTCCGACTGAAATATGTAATGCAGAAAACAACGTGCTAAGCGATTTGCATATTGGTTTACTTTTTTTTTTTGCTTGTTCTTGATGATAAGCCACAGAGATTCTGGTTGAAAGTAATTTCAGGAATTTGATTGTCTCATGCTATGAATCTGCTCTTGCTGAATAACTGAAATGCTGCTCACTTGTTGGCATGTGCCCTCACTCCATATTGTACAGTACAACAGTACAAGTTTCAGAAACAGAAGATGTGCATTAGGTACGTAGCTGAGAAATATCTGAGTATCTGACTAACAACCTACAGTTACTAATGTGTAGTTGTATGAACTATCAAGGTGCGGCGCAGTGCAGTGTGTGTTCCTCTTCTCCACAGGGTTACACTCACACACTTAGAGGATGTTAGCAATTCAATGTCTGCATGCCGCAATATAATGTTACATACAGTGCAGTGGCAGTCCATCATTGAGTTAAGCTAGTGCCTCCTTGCTTTTTTTATAAGTTCCCTTCTTTGATTCAGACTGAAATATAATGGGAAAAAAGGTGCTCATCTATTTACTTGGTTCTTTTAGCTTGTGATTGACTATCTGGATTAGGATTTAGGAACCGGTGCTTTGCTCTTTGATTGGGTGACACTTCAACGAACATCACTAAGAACATCTTGCTTGAATTAGTTCGTACCTGATCCTACTAAACTTTGGTAATAATAACACACACACACACACACACACAAAGAAAGAAATGAGTGTGCAACCATTCATGTACGTTCAGTGTATAGTCTTTTTGACTTGTCGATTTCCATCGCTATGTTTTCTGTCACGCGTCTAATTTTAGCTTCCATACAAATGATAGATGGTGGTAGATCAAACTCCAGAGCATTTGAAATTGTTTCAGTTGATTTAATTATCCCATGATTTTTTTTATGTAGGGATGCACCGCCCATTTACGGTTGATGATTTTCCAAGGCTTAGTAGTGATCATTCTGCGCAGACTGAAGCGCGGTATAGATTTCCAGATCTTCGCCTTCAAGGCCCTTTGCCACTCATTCTTTTCCGTGCCTTCAACGATCCTCTCACTGACAAACGCAGGCATNGGTTTGGTTCTGATTACCGACTCGATGACGAATCTGAAAGTAAATGCCTTCTTTAAATTAACTTCTTTGAGTTCTCTGGTGCTTTCTTTTGTCATATCATCATCTATAGATTACTGTAAACCTGCACATATTTCTCATTCTTTAGTCATCAATTTTGCAGTCAATGTCAACAGCGCTCGGACCGTTGATTGCTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTAAAACTTATTAACATCGTCACTGTACATAGCACTTCTCTTGATTGCGTTCTTACACATTTACTTGTGCTATGTGATATTACTGAAGAATAACTCGTATACATGATGTAATACTTCGTGTTCCTCATTGTAGGGTATGGCGTGTTTACCATTGACTAGCCCTGCTTGAGGTATCTGCTTGACAAGCCGTGCGCTGTTTGAATTCCAACTCTGTATTCGGACTGAAGACTCACCTGAGGCTGAGGATGAGCCCAAAGGTGACACATTGATTGAAGGATGCACTGAATTCACCAACATTTTAAGATCAACATCATTCACCAAAACTGTTCGTCTGTACGGTGAGAAGTGTGGATTGGATTTGAAGTTTGCTCTGCTGGTTAATGCAGTTCAAGCTACAGTTGATGTTGAGATTATACATTCACCTCCTTGTGGCCTTAATTTGAAGTTATATGCCAAAACTAGTGGCTTCAGCGATGTGATCCGTCTCTTCCAAGATGCTGCACAATCTGGTCATAGAATTAGTTCTGTTGTGGCGGTGGTGCGACGTAGTCACCTTGATCTTTGTATCGAAGGGTCTCCAGCAGGTATTGGTCTTGGTGAGAAGCTGCCCCGTGTAAGATGGGAGCACAGATTTGGTGCTGGTTTTCATGGAATTGAAGATGAAGTGGTGAAGCTTGGTGATTTTAGCACAATTTCTGTGAAAGTCACCTGGAAAGCTGTCGGCAAGCGTCTGGCGCCGAAGGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037649