BGIOSGA037658

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Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037658| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037658, complete gene.| tag = OsI_388...")
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Gene Name

BGIOSGA037658

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037658, complete gene.

LocusTag

OsI_38857

Ensembl Transcript ID

BGIOSGA037658-TA

Ensembl Protein ID

BGIOSGA037658-PA

Length

2423

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19343095..19345517

Sequence Coding Region

19343095..19343103,19343196..19343276,19343538..19343576,19343716..19343880,19344287..19344391
,19344476..19344544,19344661..19344723,19344810..19344928,19345031..19345517

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19343095..19345517 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19343095..19345517 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAAGGTTAAGACAGCTTTCGTTGGAAATTTACCAGCAAATGTTACAGAGGAGTATTTAAGAAAGCTTTTTGAACATTGTGGAGAGGAGCTCGACAATGCAATAAAAGAAATGGATGGTGAAACAGTCTCAGTTGCTCGGCCTGTGGTAGAGAACGATAAAAAGAGAATTCGTGAAGAAGTGAAAACTAGAAGATCAAACGTATCAAGAGACAAGCCGGACCATTCTTATGGAAGACGTGGACATGATTCATATGATCGTCAAGCAAAAGCTCCAAGGCTATATAATGAGGTGTCTGATACGGACCCCTATGAAGCAGCTGTTGTTTCACTACCTTCAGCCGTCAAGGAACTCCTACTTCGTATTCTACGTCTTAGAATTGGCACTCGATATGATATAGACATTCATTGCATAAGGAGTCTTAATGAACTTCCTGAAAAGGCTGCAGTTGCTGTCCTTAATCAGTTTTTGATATCAGGTGCAGATAAACACAATAAAGGAGACTATTTCGCTTCATTAATTGCTAAGTACCAGGCTGAGACATTTAGCTCAGCACTAAGATTGCAGGGTTCTACTTATTTGCCAAGAAATCCTGAAATACAGAACAAGAGATTCCCACATCAAGATTACGAGTACACAGCATCCGGGAGTAGTAGATACAGTTCCTTAGGTGATTATCCTTCCTCATCTTATGTGGATGATCCCGCATCATCTCAGTCAAGGAATAGAAGGTATGATGAATACAGACCTGATCTTGTAAGATATCCAGATTCAAGATCACGGCAAGAGGAAATAGTCCGCATTGAAAGATATCCAGAACCAAGATTTGCACATGAACCAAGACAGGATACTGGAAGGCATCTCGATCTAGGGTACGTACAAGAACGGAATTCGAATATTGAGAGATCAGCTCAAGTAGCTTTTTCATCTAGGGAAGGAGGATACTTATCTGCTTCAAGGTACAACACAAACATAGTCCCAGAATTCAGCTCCAGGTCATCTGCTGAATACTCTACTGCGCGCCAACAAGTAAGGTTTGATCCATTCACAGGGGAACCATACAAGTTTGATCCCTACACCGGTGAACCCATCAGGCCAGAATCGAACCCACGTCGCTCAGGAAGCTTATACTGA</cdnaseq>

Protein Sequence

<aaseq>MAKVKTAFVGNLPANVTEEYLRKLFEHCGEELDNAIKEMDGETVSVARPVVENDKKRIREEVKTRRSNVSRDKPDHSYGRRGHDSYDRQAKAPRLYNEVSDTDPYEAAVVSLPSAVKELLLRILRLRIGTRYDIDIHCIRSLNELPEKAAVAVLNQFLISGADKHNKGDYFASLIAKYQAETFSSALRLQGSTYLPRNPEIQNKRFPHQDYEYTASGSSRYSSLGDYPSSSYVDDPASSQSRNRRYDEYRPDLVRYPDSRSRQEEIVRIERYPEPRFAHEPRQDTGRHLDLGYVQERNSNIERSAQVAFSSREGGYLSASRYNTNIVPEFSSRSSAEYSTARQQVRFDPFTGEPYKFDPYTGEPIRPESNPRRSGSLY</aaseq>

Gene Sequence

<dnaseqindica>1..9#102..182#444..482#622..786#1193..1297#1382..1450#1567..1629#1716..1834#1937..2423#ATGGCCAAGGTAATGTAAATGACAAACACTTTTTTTTATTGATATAGATATAGATATAGATATTTTCTATCTTGATATGTTTTCATTTCGTCTATATCCAGGTTAAGACAGCTTTCGTTGGAAATTTACCAGCAAATGTTACAGAGGAGTATTTAAGAAAGCTTTTTGAACATTGTGGAGAGGTCTGTTATGCGCCAATGTGGCAGCCAAATGTGTGCGTTCACCAGTTTTATTTGAAATATTAAATAAATCTGAAAAGTAAAGCATTAATGTTTAATTAGGTAGTACGGGTTGCAGTCTCAGGAAAGGACAATATCCAGTTGGATTTGTCCACTTTGCCAGTCGTACAGTAAGTATTTGTACATGTTGTTTTAATCCTATTGAGTTTTATAGGTTGAACTCTCATACAAGTTGTTGTCATTATCTTTTTTTGTTGATGGAAGGAGCTCGACAATGCAATAAAAGAAATGGATGGTGAAACAGTGAGAGGACCTGACCGAGGGGCAACTTTCAGGATCCAGGCATGAATAAGAATGTTATTTCTGTGGAGCAACTTATAGATTCTTATTGCTTATTTTACTTTTGTACTATTGGATTTGACATCCCTGTTTATTGCAATAGGTCTCAGTTGCTCGGCCTGTGGTAGAGAACGATAAAAAGAGAATTCGTGAAGAAGTGAAAACTAGAAGATCAAACGTATCAAGAGACAAGCCGGACCATTCTTATGGAAGACGTGGACATGATTCATATGATCGTCAAGCAAAAGCTCCAAGGCTATATAATGAGGTACTACATACGAATGATAAGCTCCTTCATTGTGCCCTGAAAGGGTCAAATCAGAGTTAACCATTTACTCTCGCACTTCAGTCCACTGTTTTATTAGTCTGTGATGTCACAAGGTTCATTCTGTAGTTTTTTATCAGTTTGTATAAACTAGACTATGTTTTAGTTTGTTCTGTAGGATTTGTTATTTGTACCGGTTTCTATGAACTCAACAATTTTTTTAGTTTACTTCAAAAGCATGGCACAACCTATTCCAGCTTCAAACAGTTGAATCAGCAATTTTTCTGTCCTTTGTAGTTCTGGATTTTATATGAATGCTTAGTCGAAAGAATAAATTGCATATAATTCAATAAGGAACGCCATGTTTGTTGACATGATAACCCTTTTCTGCCAATTTTCTTTTTTGCAGGTGTCTGATACGGACCCCTATGAAGCAGCTGTTGTTTCACTACCTTCAGCCGTCAAGGAACTCCTACTTCGTATTCTACGTCTTAGAATTGGCACTCGATATGATGTAAGTAATCTGTACATAAGGTCTCTACTTGTGCCTTTTTTGGGTGTGTAAAACATGGTCTGCCTGTCCATTTTTCTTTTTCAGATAGACATTCATTGCATAAGGAGTCTTAATGAACTTCCTGAAAAGGCTGCAGTTGCTGTCCTTAATCAGGTATGGAGTTGTTTCATGCACATGATCTCTGACTCTGAGATCTGACCTGTTCTACCATATCATTATGCTTAGCTAAAAATGGCATTCATTATTCTGATGATTATTCCTGCTCGCAGTTTTTGATATCAGGTGCAGATAAACACAATAAAGGAGACTATTTCGCTTCATTAATTGCTAAGGTTTTTACTACCTACCTGATTCAATATTTCACCTTTTTAGTGTTTTTTTGATTGATGTGTACAATTTGTCCCCTTTTCATTTGCAGTACCAGGCTGAGACATTTAGCTCAGCACTAAGATTGCAGGGTTCTACTTATTTGCCAAGAAATCCTGAAATACAGAACAAGAGATTCCCACATCAAGATTACGAGTACACAGCATCCGGGTAAACTATTTTTTTTCTAGGACAATGAAAATTTTATTTTCAACTGTTCTACATCTGTGTAAACTTTGAGCCTGGCACCATTGATCTATGTTTTACTTGCAGGAGTAGTAGATACAGTTCCTTAGGTGATTATCCTTCCTCATCTTATGTGGATGATCCCGCATCATCTCAGTCAAGGAATAGAAGGTATGATGAATACAGACCTGATCTTGTAAGATATCCAGATTCAAGATCACGGCAAGAGGAAATAGTCCGCATTGAAAGATATCCAGAACCAAGATTTGCACATGAACCAAGACAGGATACTGGAAGGCATCTCGATCTAGGGTACGTACAAGAACGGAATTCGAATATTGAGAGATCAGCTCAAGTAGCTTTTTCATCTAGGGAAGGAGGATACTTATCTGCTTCAAGGTACAACACAAACATAGTCCCAGAATTCAGCTCCAGGTCATCTGCTGAATACTCTACTGCGCGCCAACAAGTAAGGTTTGATCCATTCACAGGGGAACCATACAAGTTTGATCCCTACACCGGTGAACCCATCAGGCCAGAATCGAACCCACGTCGCTCAGGAAGCTTATACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037658