BGIOSGA037660

From RiceWiki
Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037660| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037660, complete gene.| tag = OsI_388...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037660

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037660, complete gene.

LocusTag

OsI_38859

Ensembl Transcript ID

BGIOSGA037660-TA

Ensembl Protein ID

BGIOSGA037660-PA

Length

2601

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19354724..19357324

Sequence Coding Region

19354724..19354813,19356120..19356284,19356679..19356783,19356868..19356936,19357053..19357115
,19357202..19357324

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19354724..19357324 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19354724..19357324 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATCCTATCCCTATAAGCATCTCTAAAAGACCGGACCAATATATCTTGAGATTGATGAAGTCACCACGGACATCTCGCTATCGATGGGTCTCAGTTGCTCGGCCTGTGGTAGAGAACGATAAAAAGAGAATTCGTGAAGAAGTGAAAACTAGAAGATCAAACGTATCAAGAGACAAGCCAGACCATTCTTATGGAAGACGTGGACATGATTCATATGATCGTCAAGCAAAAGCTCCAAGGCTATATAATGAGGTGTCTGATACAGACCCCTATGAAGCAGCTGTTGTTTCACTACCTTCAGCCGTCAAGGAACTCCTACTTCGTATTCTACGTCTTAGAATTGGCACTCGATATGATATAGACATTCATTGCATAAGGAGTCTTAATGAACTTCCTGAAAAGGCTGCAGTTGCTGTCCTTAATCAGTTTTTGATATCAGGTGCAGATAAACACAATAAAGGAGACTATTTCGCTTCATTAATTGCTAAGTACCAGGCTGAGACATTTAGCTCAGCACTAAGATTGCAGGGTTCTACTTATTTGCCAAGAAATCCTGAAATACAGAACAAGAGATTCCCACATCAAGATTACGAGTACACAGCATCCGGGTAA</cdnaseq>

Protein Sequence

<aaseq>MYPIPISISKRPDQYILRLMKSPRTSRYRWVSVARPVVENDKKRIREEVKTRRSNVSRDKPDHSYGRRGHDSYDRQAKAPRLYNEVSDTDPYEAAVVSLPSAVKELLLRILRLRIGTRYDIDIHCIRSLNELPEKAAVAVLNQFLISGADKHNKGDYFASLIAKYQAETFSSALRLQGSTYLPRNPEIQNKRFPHQDYEYTASG</aaseq>

Gene Sequence

<dnaseqindica>1..90#1397..1561#1956..2060#2145..2213#2330..2392#2479..2601#ATGTATCCTATCCCTATAAGCATCTCTAAAAGACCGGACCAATATATCTTGAGATTGATGAAGTCACCACGGACATCTCGCTATCGATGGGTATGTCATCTACCATTGAAAAAATAAATGGCTGTAAATATAAGCAGTCATGTTAAGTCTAAGACTTATAATCATCACAAGGAACTTAACTATTTGAGCTACACTCACTTCGCACCCTCCCATTGATTCCAGCTTCTTGAATAATATTTTTTTTCCAAATTAATTGATCTCAAACTCCACATATGTGAAAAAGGAAACATTTTTTTTTAAAAAAATGACTGGTTTTGATGCATCACTAGGGTTTCTCTGGTTAAAAGAAAAAAAAAGAAAATGAGAACTAGTTTCCTAAAATGGGCTGGTTCCACCCAGAATCTCCGTGGATTAGGCCCAACATATTACTCCGGGGTGAGGATAAAATATGTGGGCCTGTTGGGCTCGTTGGCCCTATAGAAATTTAGGCATGTTTTCGTTTGTAAAAAAAAATCCTAGTACATTAAAGCGAGCCTTAGTTTTATGACAACGTTTCAAATATTGCCTTTGAAAACCCATCGTAGTATACTCCATCTGGTTTCAAAAATTTGTTACCGTTGACTAGTACAATTTTATCTTTGACCTTCAATAATTTTTGAATGTTTATAATTATATCATAATATACAGAAGTTTCATGACTATGTTTACAATGGAATGTATTTCGTTAATATGGTTTATGCATCTTCTTTAAGCAAGACGAGCGGCCAAAGTTTGAAGATGAATACTTCCTCCGTTCCATATTATAAATTATTTTGAATTTTTTTTCTAGTCGGACTTTTTTAAGTTTAATCAAATTTATAAAAAGAATTAGCAACATATAAAACATCTAATTAGTTTCATTGAATCTAATATTTAATACATATTTTTTTATAAACTTGATCACTTAAAGAAGTTCAACTAAACAATCAAAATAACTTATAATAATATGAGACAAATAGAGTAGTACCCATCTAAAAAGTACTTGAAGACAGATAGAGTAGTTTTTTCCCCCTCCTCCAGTTGTCCATCTATGATAGATGTTTCCTCGAAAAAATAACATCCGTCTCTATTGCCACCAGCCAAATCAGTGACACTTTTCCTAAGTGTTCGCACCTACTGGTTGGGAACACCCTCCTCCGGTACGAAAAACGGAGCAGTTCATTAGCGCGTGATTAATTAAGTACTCTCTCCGTCCCATAATATAAGGGATTTTGAGTTTTTGCTTGTAACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGCACTTATAGATTCTTATTGCTTATTTTACTTTAGTACTATTGGATTTGACATCCCTGTTTATTGCAATAGGTCTCAGTTGCTCGGCCTGTGGTAGAGAACGATAAAAAGAGAATTCGTGAAGAAGTGAAAACTAGAAGATCAAACGTATCAAGAGACAAGCCAGACCATTCTTATGGAAGACGTGGACATGATTCATATGATCGTCAAGCAAAAGCTCCAAGGCTATATAATGAGGTACTACATACAAATGATAAGCTCCTTCATTGTGCCCTGAAAGGGTCAAATCAGAGTTAACCATTTACTCTCGCACTTCAGTCCACTGTTTTATTAGTCTGTGATGTCCCAAGGTTCATTCTGTAGTTTTTTATCAGTTTGTATAAACTAGACTATGTTTTAGTTTGTTCTGTAGGATTTGTTATTTGTACCGGTTTCTATGAACTCAACAATTTTTTTAGTTCACTTCAAAAGCATGGCACAACCTATTCCAGCTTCAAACAGTTGAATCAGCAATTTTTCTGTCCTTTGTAGTTCTGGATTTTATATGAAGGAATAAATTGCATATAATTCAATAAGGAACGCCATGTTTGTTGACATGATAACCCTTTTCTGCCAATTTTCTTTTTTGCAGGTGTCTGATACAGACCCCTATGAAGCAGCTGTTGTTTCACTACCTTCAGCCGTCAAGGAACTCCTACTTCGTATTCTACGTCTTAGAATTGGCACTCGATATGATGTAAGTAATCTGTACATAAGGTCTCTACTTGTGCCTTTTTTGGGTGTGTAAAACATGGTCTGCCTGTCCATTTTACTTTTTCAGATAGACATTCATTGCATAAGGAGTCTTAATGAACTTCCTGAAAAGGCTGCAGTTGCTGTCCTTAATCAGGTATGGAGTTGTTTCATGCACATGATCTCTGACTCTGAGATCTGACCTGTTCTACCATATCATTATGCTTAGCTAAAAATGGCATTCATTATTCTGATGATTATTCCTGCTCGCAGTTTTTGATATCAGGTGCAGATAAACACAATAAAGGAGACTATTTCGCTTCATTAATTGCTAAGGTTTTTACTACCTACCTGATTCAATATTTCACCTTTTTAGTGTTTTTTTGATTGATGTGTACAATTTGTCCCCTTTTCATTTGCAGTACCAGGCTGAGACATTTAGCTCAGCACTAAGATTGCAGGGTTCTACTTATTTGCCAAGAAATCCTGAAATACAGAACAAGAGATTCCCACATCAAGATTACGAGTACACAGCATCCGGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037660