BGIOSGA037666

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Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037666| Description = BGIOSGA037666| Definition = Oryza sativa Indica Group BGIOSGA037666, complete gene.| tag = | tid = BGIOSGA037666-TA|...")
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Gene Name

BGIOSGA037666

Description

BGIOSGA037666

Definition

Oryza sativa Indica Group BGIOSGA037666, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA037666-TA

Ensembl Protein ID

BGIOSGA037666-PA

Length

7348

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19465797..19473144

Sequence Coding Region

19465797..19466474,19468133..19468166,19470341..19470561,19470658..19470694,19471107..19471290
,19471457..19471605,19471710..19471940,19472045..19472234,19472319..19472448
,19472752..19473144

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19465797..19473144 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19465797..19473144 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAGCTTGCAAATTTGGGGCACATCATTCCCCTGAACCCAAGAAGTACTGGCCTGTTCGTCGCAGGCGACATCAGGACCGTGCCAATGCCGGGTGCGGAAAGCAAGGCCAGGATGAAATCCAGACACTAAAAGGCAGATCCAGAAACAAGGACCTGGAGCTGAAGATTTGTCTTGTGAAAGATGGTAATGTTCATGACAAGCCTGAATTCATCGAGGTGAAGAAGCCGCCTATTGAAATGGCATCTGACAACTCTGAAACCTCACCATGCGTGCAAGATCAGTTGTCATCAGCTGAAGAATCCAAACGTGTTGAGGATGGAGCTGATCTGCCATGTGGTGATGATAAATTCTTGATCCCTGATGGCNATGCTGCATGTTTTGTGGATGGAGAATCATCAGAGGGAGCTGTAAGCATTGAGCTGGAGATGCCGTTGGCCATCCAGGACAGTGACGCGTCTGACGATCATATCGCAGATCCCATTTCGCCTCCTGAATGTGTGTACAAAGCTGGTGAACAGTTACTTGTGGATGACATGTGTGATGATGGATCAGGAAATGAGTGTGCAGGTTCAGAGAAGAAGAGCACTCAGATTGTGATGGCCTCCGAGAAGCGTGAAAAATCTGGGCATGGAACTAAATCGAAGAGTTTGTATAATGTTTCAGTAAAACCGAAGGATAGGTTTTTGGATCAATACATTGGATGGAAAGGGGAGGAAAGCATGAGGCTATGGTTTCTCATACCTCTTCTTCTCTGTTTGCCTACATTGATTCAATCCGAGGATTACTCGGATGTGACCATCGTCGTTCGGGGCGCTGAGACGATCGCTTCAACCAGCGACGAGTTCATTTGCGCCACCATTGATTGGTGGCCTCCAGAGAAGTGCAACTATGACCAGTGTCCATGGGGGCAAGCTTCTATCTTAAATTTGGACTTGACTAATCCTTTGCTAGCTAAAGCTATCCAAGCCTTTAGCCCTCTACGTATCAGACTTGGAGGTTCCTTACAAGATCAGGTGGTGTATGGCACGCTGAATTTAGGATCTCCATGCACCCCATTTTCAAAGAGTTCAAGTGGCCTGTTTGGATTTTCTCAAGGATGCATAACCATGGAAAGATGGGATGCTATTAATAAGATCTTTGTGGATACAGGTGCAGTTGTTACATTCGGCCTTAACGCGCTTCAAGGGCGACAGCAGATGGGCAGAGGTGCTTGGGGAGGTGCTTGGAATTCCAGTAATGCTCGGGAGTTCATGGAGTACACTGTTTCAATGAACTACCCTATAGACTCATGGGAATTTGGTAATGAGTTGAGTGGAAGTGGAATTGGTGCAAGTGTTGGAGCTGAACAATATGGAAAAGATATAATCGAGCTCAAGAACATCATCAGCCAGTTATATGGAAACTCTAGGAAACCATTGGTGGTTGCCCCAGGAGGATTCTATGACCAAAAATGGTATGCTCAGCTTCTTGATATCTCCGGTCCAAATGTTCTCGACGCAATGACTCATCATATTTACAATCTTGGTGCTGGTAACGATCCGCAAGTTGCAAATAGGATCTTGAATCCGCAGTATTTGAGCCAGAGCTCTGATACATTCAGAGATCTCCAAATGACGATACAGCGGCATGGACCATGGTCTGCTCCCTGGGTTGGGGAAGCTGGTGGTGCATATAACAGTGGCAGCCGAAAAGTGTCTAATACTTTCCTGAATAGCTTCTGGTATCTTGATCAGCTTGGTCAGTCAGCAAAGTATGACACAAAGGTTTACTGCAGACAGACTTTGATTGGAGNCAACTATGGCCTTCTTGACACCGAAACTTTTGTTCCNAACCCTGATTACTACAGGCAAGGCGGCGTCGCGCTCCTCATGCTCAACCTGAACAAGAACATGGGATTCATGGTCTCAGTCAGAAATGATCTCAACATCAATTTCAGAGAGATGGCAGGGATAAAGAGGGACAGCTCATTTGTCCATGGCCTCAAGAGGACAGTCTCCTGGGTTGGGAGCAAAGCCTCTGATGGGCTTGAGAAGAGGGAGGAGTACCATCTGACTCCACAGGATGGCAACCCTTTTGCCAGGACAGTGCTGCTCAATGGAGCTCCTCTTCAGCTCACTGGAGATGGTGACATCCCTTCACTGCCACCAGTGATGGTCTCAGTCAATTCCCCGATCTATGTCGCCCCGCTGTCCATCGCGTTCATCGTCTTCCCAGATTTCGAGGCTGAAGGTTGCGAACGATGA</cdnaseq>

Protein Sequence

<aaseq>MTACKFGAHHSPEPKKYWPVRRRRHQDRANAGCGKQGQDEIQTLKGRSRNKDLELKICLVKDGNVHDKPEFIEVKKPPIEMASDNSETSPCVQDQLSSAEESKRVEDGADLPCGDDKFLIPDGXAACFVDGESSEGAVSIELEMPLAIQDSDASDDHIADPISPPECVYKAGEQLLVDDMCDDGSGNECAGSEKKSTQIVMASEKREKSGHGTKSKSLYNVSVKPKDRFLDQYIGWKGEESMRLWFLIPLLLCLPTLIQSEDYSDVTIVVRGAETIASTSDEFICATIDWWPPEKCNYDQCPWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTLNLGSPCTPFSKSSSGLFGFSQGCITMERWDAINKIFVDTGAVVTFGLNALQGRQQMGRGAWGGAWNSSNAREFMEYTVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNSRKPLVVAPGGFYDQKWYAQLLDISGPNVLDAMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTIQRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGXNYGLLDTETFVPNPDYYRQGGVALLMLNLNKNMGFMVSVRNDLNINFREMAGIKRDSSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQDGNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFIVFPDFEAEGCER</aaseq>

Gene Sequence

<dnaseqindica>1..678#2337..2370#4545..4765#4862..4898#5311..5494#5661..5809#5914..6144#6249..6438#6523..6652#6956..7348#ATGACAGCTTGCAAATTTGGGGCACATCATTCCCCTGAACCCAAGAAGTACTGGCCTGTTCGTCGCAGGCGACATCAGGACCGTGCCAATGCCGGGTGCGGAAAGCAAGGCCAGGATGAAATCCAGACACTAAAAGGCAGATCCAGAAACAAGGACCTGGAGCTGAAGATTTGTCTTGTGAAAGATGGTAATGTTCATGACAAGCCTGAATTCATCGAGGTGAAGAAGCCGCCTATTGAAATGGCATCTGACAACTCTGAAACCTCACCATGCGTGCAAGATCAGTTGTCATCAGCTGAAGAATCCAAACGTGTTGAGGATGGAGCTGATCTGCCATGTGGTGATGATAAATTCTTGATCCCTGATGGCNATGCTGCATGTTTTGTGGATGGAGAATCATCAGAGGGAGCTGTAAGCATTGAGCTGGAGATGCCGTTGGCCATCCAGGACAGTGACGCGTCTGACGATCATATCGCAGATCCCATTTCGCCTCCTGAATGTGTGTACAAAGCTGGTGAACAGTTACTTGTGGATGACATGTGTGATGATGGATCAGGAAATGAGTGTGCAGGTTCAGAGAAGAAGAGCACTCAGATTGTGATGGCCTCCGAGAAGCGTGAAAAATCTGGGCATGGAACTAAATCGAAGAGTTTGTATAATGTTTCAGTAAAACCGAAGGTGAAAGAGACATCGACTGCAACGCGAAGCAATGCGTCAAGCCAGAAAATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAAAGGATATAGATAAATATTATTTGAATATGAAAATGAAAAACAAAGTCTTGGTTTGAAGTAGTTGGATGAGCATGCCTTGTATGACATACTCTCCATCTAACCATTTCTAATATTATAATATTGGACTTTAGGACAAGAACGAATCATGCCATTTAAAAGGATACCACATTATCTACCAAAAAAAAAAAAACAAGGGTATCAATATCACTGAGTTTTTTTTTTATTTTGGGCAAGCAATTTTTCCAGTGCTCACCAGTTACTTCATGTTGCTGGCATCTCACAAATTTACCTCCAGCATTTGTGAATCATAATACGGTAGATTTGCAGCAGATAATTGGAAATAAAGATGTACAGCCAATTACTGATATTAACCAGTGCCATTTTCACAGGGCAGGCAGTTATGTCAAATTGTCAAGTGCTTTTACCCTCATTCATTCTAGAATCATAGGTAAATAGTAGCAACTAATTGCATATTTGCATTAGGTGACCATTGACTACTGAGATCCTGATAGTAATAAAAAAGAATAGAGGATGATGATTGTGAGTTAGTAGTATCCCTCAGCACAATCATGATACAGTTGCAAACATTGATTTAATTAGGATAGGTTTTTGGATCAATACATTGGATGGAAAGGTTTGTTTGTCTAAGCCTATCCACTCAACAAGTGCAAGTTGCATCTCAGAGGAAAGTGGATAGAAGCAAGGTCACCTTTTTCTCTCCACTTTGTTTTTTTTTGTCCTTTTGAAAACACGCAATTTGCATTGAAATTGTGATGTGGATTCGTTGATCTTTGACTTGCATCTCCCCAATCCTTTTCGTCCTGTAAATCAAAACTTAGGATTTGGACTTCTTGCTGAAAATCACATCAAGCCATAATTCCTTGCTCTTTCTTCAAGCCAAGAATTAACAGCCCTAATCACTTTCTCATGTGCTATTTCATTATCTTTGATGTTCTTTTGGCACCAAAAAAAAGTATAACAGGTGTTTATCTTGGTAAAAAAAATCGTTTTTTTTTCACAGAGACTCTTGCAGCTAATTGGAACATTGTCGTCAACTTATGCCCATACTTTACCCGGTCAACAGACAACAGCTATGATATGCCTGCTGCTGAGTAATGGGCCCCACATGTCTGCCATTCATCTCACACCAACTACACTACACTATTTCAAGATGAGAAAAATCCAACACGTAAATGACTCTATATCCTACATGTGAACAAAATATTTCTACAAAATCCAAGATACTCTTAATTTTTTTTTACCCAGAAACCAAACTAAAATTCCTCAAACATCATGCAGGAATCAGGATGTAATAAAAAAAGTGTTATTTTTATCAAGCAGGAATCAGGATATTATTTTTAATACAACCTGGAGTCAGATTTTTTTTTTTTTGTTTTATCATGTCTCCTCTGTTGCGGCTGTTGCCTTCAGATTTATTAGACCAGTTCATCTCAACCCAGAAAAGAAAACAACTGAGGCAGTAACTTTCCAGAAGCACATGTAAAGAACAAAAACATCACTGTTTAAAGGTTAGTAGGAGCATTAGTACTTATTTTTTAAAAAAGATAATACAGTATTAGTACTCTAAATCTAATTAGGAGCACATAGCTTTCTGTACTATAGCAAGGGAGGAGTGAGAGTAGCTTCCAAGGGAGACATAAAAGAGAGGCAGCAACTACCACCAATACTTCTACTTCCTCAAGAATCTCTCCTCTTCTTTTCTATCCAAGAACCGCTCAAAAGCTCGAACCTTGCGCAATCTTTTTAAATCTTCCCGACCATTTCCTCCGGGTTTGATTCTGGGCAGAGATTGCGAGGGGAAAGATACGAGCTTTTCTTGGCTTCTTTCCCCTGCATTGGGAAAGATACGAGCTGCTGCTGTTCTTTGGGAAGAACAGCTTGGGACATTCTTGGGTTGGGGTTTGATTCCCAGGTAATGGAACTCTTCTTGGTTTCTCTTGGATTCCGTGCAGTATTTCTGCTGTTTTTAGTATATAAATCTGTGGCAAATTACGCTGCGCCTGTGTTGGCTTTGGTTGTGGTTGCTTCATTTGGTTTCAGTTTGTTCGAGCCTTCGAGGATTTGATTCTGTTTAGGTGCAGTTTTGGAGGAAGTTGGGTTAGCGTGTTCCATCAGCCAGTTTGATAAGTTTTTGTTAATTCGATGTTCAGATTCTGCTGGGTTTATTTTGGGTTTTGCTGAACTTTATTCTATGTCAGAGAAACTTTGATCTTCAGCTTTCTCGAATTTGAGCAGAAATGGCGTGCTCAGGTCGATCGTTTGCATGTTGAAAAGGATTCCTTTCTTCAAGTTTCAGGGTCCTCTTTGCAGTTTGGGATGATTTTGCCAATTGCAGAATTTCACCCTGCTCAACTGATAAACTTTCCCCTTTCTTCAATGAAATATCCTTTCGTTCTTTCTTTCTTTTTTTTTTTTTTGCATTTTGTTGTTTAGTGCTAGTTCATGGATGATTTCCTCAAATGTTAAAAGAATTATATTTCTCTGGATACTGCATTTGGAGAGGCCTAAGTTGCTCCAATAATTGAGATAGTAACATAGTTGTTTACTTGCATGGAAACAAAGTTTAAACTGTTCGTTTGTAATTGATTTGACCTGTTAAACATGTAAATATAGGACATATAGGAGATGATGATAGGGCAGGTGTCACTTTCATCCATGTTGATAAAATTAAAACTTAAGGCCTTCTCCTTAGTCCTTACCAACTAGTAGTTGCCTTATTTAATTAGCACAATAAGTCTGAGACATTTCTGGTTGTCTTTTGGGTTGGGTGGACAACACCATTTGCAGGGGAGGAAAGCATGAGGCTATGGTTTCTCATACCTCTTCTTCTCTGTTTGCCTACATTGATTCAATCCGAGGATTACTCGGATGTGACCATCGTCGTTCGGGGCGCTGAGACGATCGCTTCAACCAGCGACGAGTTCATTTGCGCCACCATTGATTGGTGGCCTCCAGAGAAGTGCAACTATGACCAGTGTCCATGGGGGCAAGCTTCTATCTTAAATTTGGTAAATTGCTAATTTCCCAAGAATGTGTGTGTTTTATCATGTTGTAATTGATATTTTTGCAAAGAACTAATTTTGATCCTTTTGTGAATTTCCCAGGACTTGACTAATCCTTTGCTAGCTAAAGCTATCCAAGGTGAATATTCTGCCTATTTTCTGCGAACAATTTTCTACTGTAACTAAAAAAAATGGACAACAGTAGGGAATTTCCATACTAAATTGCAAATAGGGTTAAAGTTACAAAGTCAAAGACTCAAAGAATTCTTGTCAAAGATTTATCTGTTCCTTTGCAACTACATATGCCAGCAACTGTGATCAATTTCATTCTACCGTGTGGAGGTTTACTTGTTACACTGCCTAATATAAGATATTAGAGGGTAAATCCCGTTTTAAGAAACATATTGACATTTGTGGTTCATTCTGTACCTTTATTTATTAAGCCTGGCATTTGTTTAGAGCTACTTTCCACAAAATGTATTTGCCTTCTTATGGTTTTCTACACTTTCCCATGATTCATGGACTTTTTTCCCATTTATTTGTTTTTGTAGCCTTTAGCCCTCTACGTATCAGACTTGGAGGTTCCTTACAAGATCAGGTGGTGTATGGCACGCTGAATTTAGGATCTCCATGCACCCCATTTTCAAAGAGTTCAAGTGGCCTGTTTGGATTTTCTCAAGGATGCATAACCATGGAAAGATGGGATGCTATTAATAAGATCTTTGTGGATACAGGGTAAGGGCCTTCCTTCTCCAGTTGCTTCTGATGTCTGCATTTTTTTTTTCTGTAGTGAATTCTGATAGATTATAAGATGAATTGTTCACCGCATCACATATTAGAACCTACCATATAGCTCCATTCAGTGTGTTTCCTAACCCATTTTTTCATTTAATCCCTTCAGTGCAGTTGTTACATTCGGCCTTAACGCGCTTCAAGGGCGACAGCAGATGGGCAGAGGTGCTTGGGGAGGTGCTTGGAATTCCAGTAATGCTCGGGAGTTCATGGAGTACACTGTTTCAATGAACTACCCTATAGACTCATGGGAATTTGGTATGAATTATAAAAACTAATAAAACCTTCACTTGCTGCCTACAACGTTAGAAGCATCGGTCATTTAAGTAATCCTTACATAATTAGTTGTGCTTATGTACTAGGTAATGAGTTGAGTGGAAGTGGAATTGGTGCAAGTGTTGGAGCTGAACAATATGGAAAAGATATAATCGAGCTCAAGAACATCATCAGCCAGTTATATGGAAACTCTAGGAAACCATTGGTGGTTGCCCCAGGAGGATTCTATGACCAAAAATGGTATGCTCAGCTTCTTGATATCTCCGGTCCAAATGTTCTCGACGCAATGACTCATCATATTTACAATCTTGGTGCTGGTAAGTACTTCCTAGATATAATGTTAGAACCACGCCTTAATTCATCTTTGTTTTTAGGTTGTACTACACATTTAAGATGACTGACATAAACCAAATTTTATTAGGTAACGATCCGCAAGTTGCAAATAGGATCTTGAATCCGCAGTATTTGAGCCAGAGCTCTGATACATTCAGAGATCTCCAAATGACGATACAGCGGCATGGACCATGGTCTGCTCCCTGGGTTGGGGAAGCTGGTGGTGCATATAACAGTGGCAGCCGAAAAGTGTCTAATACTTTCCTGAATAGCTTCTGGTAATTACTTGCCAGTTCAACAGATAATTATTCCAACCATGGGGATTTTTCTTGTTTTGTTCTTAAACTTGCTGTTTCAACTAGGTATCTTGATCAGCTTGGTCAGTCAGCAAAGTATGACACAAAGGTTTACTGCAGACAGACTTTGATTGGAGNCAACTATGGCCTTCTTGACACCGAAACTTTTGTTCCNAACCCTGATTACTACAGGCAAGTATCCCTATACTTTGCTCTGCCACAATCATTCTTTACTACCCTATATACCTTTTGTACTAAATCGCGGTATATGTTCAGTGCCTTGCTGTGGCATCGGCTCATGGGGAAGGGAGTTATTTCCTTAGACACCAGCGGTTCTTCGTACTTGCGTGCCTATGCGCATTGCGGAAAGCAAAGGGTATGAACCATGATGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGGCGGCGTCGCGCTCCTCATGCTCAACCTGAACAAGAACATGGGATTCATGGTCTCAGTCAGAAATGATCTCAACATCAATTTCAGAGAGATGGCAGGGATAAAGAGGGACAGCTCATTTGTCCATGGCCTCAAGAGGACAGTCTCCTGGGTTGGGAGCAAAGCCTCTGATGGGCTTGAGAAGAGGGAGGAGTACCATCTGACTCCACAGGATGGCAACCCTTTTGCCAGGACAGTGCTGCTCAATGGAGCTCCTCTTCAGCTCACTGGAGATGGTGACATCCCTTCACTGCCACCAGTGATGGTCTCAGTCAATTCCCCGATCTATGTCGCCCCGCTGTCCATCGCGTTCATCGTCTTCCCAGATTTCGAGGCTGAAGGTTGCGAACGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037666