BGIOSGA037705

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Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037705| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037705, complete gene.| tag = OsI_389...")
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Gene Name

BGIOSGA037705

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037705, complete gene.

LocusTag

OsI_38944

Ensembl Transcript ID

BGIOSGA037705-TA

Ensembl Protein ID

BGIOSGA037705-PA

Length

5124

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20286251..20291374

Sequence Coding Region

20286251..20286301,20286426..20286763,20287718..20287775,20288278..20288594,20288943..20289066
,20289459..20289876,20289964..20290169,20290380..20290647,20290775..20290962
,20291111..20291374

Genome Context

<gbrowseImage1> name=IndicaChromosome12:20286251..20291374 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:20286251..20291374 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGATCAAAAAAGGAGTTTCATCAATGTTATGATTGGTGATTTTGTGGCAGTACCAACAAAATTTGCAAACTTTATCAGAGGGCAGATATCTGAAGTAGTCAAGCTAGAGGTGCCAAATGGTAAAACATATGATGTTCACGTTGCCAAGGAACATAACGAGCTGGTCCTTCGATCTGGATGGGGGGCATTTGCTAGAGATTATGAGCTCAAACAGTGTGATATATTAGTGTTCACATACAGTGGGAGCTCTCGCTTCAAAGTTCGAATCTTCAATCCAAGTGGTTGTGAGAAAGAGTTATCCTGTGTCATGATGAACAACACTCCTTGTGGCCATGAAGGGAGCATGTCTTATCATGACAACCATTTGCAATCACCAAGTGAAAGCTCTTCATTCTTCAATATATCGCTGCCACCTCACAGTCCGTTTCAAGAATTATCTGGAACCATACTGAAAATGTTTGCAAAGAATGTCCAAGGTCTGATTTCTGGAGTAGCCAAACTAGAAGTTCCAGATGGCAAAACATATGATGTTGAGATATCTAAGGAACATAATGAGTTAGTATTTCGATCTGGATGGGAGGTGTTTGCCATTGCTTATGAACTCGAACAGGGTGATATCTTGGCTTTTGGTTACAGTGGGAACTCCCACTTCAAAGTTCAGATATTTAATCCAAGTAATTGTGAGAAAGAGTTATCCTGTGTTGTGATGAACAGGAGCATCTCTGATGATAACCATCGACAATCACCCAGAAGGGAAAGGATGAACAAGCCTAGCACAACATGCATGGACTGCATTACAAATCATTATTGGCTCCATATGGATGACAGGGAAAGATATTTCTTTAAGGTTATGATGAGTGTGAGTGATATCAAGGATGAACTGGCTATACCGAAAAAGTTTGCGGCCAATGTCAGAGGGAAGATACCTGAACAAGTCAGACTAGAAGTGTCAGATGGTAAAATGTATAACGTTCAAGTTACTGAGGAACAGGATGAGCTGGTCCTTCGATCTGGATGGGAAAATTTTTCCAGTACTTACCAACTTAAACATGGTGATCTCTTGGTGTTCATACATAGTGGGCACTCCCACTTCAAAGTTCTAATATTTGATCCAAGTTGTACCGAGAAAGAGTTCTCCTGTGTTGTGACGGACAACACTAGTCATGTGCATGAGAGGAGCATTTCTCATGATAATCATTTGCAATCACCAAGGAGTGAAATCTTGGGAAAGAATTATAGTCTTTGCTCTAGTAGGAAACGGTCAAGGATGAATCCAGCAGACTATCCTTCACAGAGACCAGACGTCCCATCTTCTGAAGACATTAAGGATCCCATGAGTTCAGGTGGCCTCCAGAAGTCAAAAAAGTCTTGCTATGTTTTACCAATGTTGTACAATATGACTAGTGCACAAGAGGCAGAAGTTCTCGCTCTTGAGAAGAAAATTCAACCTCAAATTCCACTGTACATCACAGCTATGGACAAGACAAGTGTGGCAAGTGGATCACTGGTCTTCTGTAAGAATTATGCTGTCAGATATCTTCTTGACCAAAATAGGACCATCAAACTATGTCAATCTGGTGGTAGCCAGACATGGGACATCAGTTTGGACATGGACACTGATGATCTATATGCCCTCTCTACTGGCTGGTTGGACTTCTTTCGCGGCAATCTGTTGCAAGAAGGTGACATCTGTGTATTTGAAGCTTCAAAGAGCAAGAGAGGAGTGGCATTAACATTTCATCCTTTCAAAGAAAGTCATTGCCCAAAGTCATCAGAATATACCCTTTCCACCAAGAGTCCTACACGTAGAGTTCCTAAGCGGGACTATTTTGCAACAAATCTTACTAATCTAACTGATCAACAAGAGAGGAAGGTTAAAAACAAAATAAAATCTATACAGTCTGATATCCCCATTTTCTTGTCTGTCATGCGCAGTTCCAACTGTACCCGTCAAAGTTCTCTGTGCTTCAGCGTGAAATACGCTTCAAAGTATCTCCCACATAAAGACCAAAATATGAGGCTGCGGCTGCCGGAGACGAAATATAAGTGCAAAGCTGCGTTACATATCGACACAAGCACCAATCTTCACAAGCTTCTCAAAGGCTGGGGGAAATTTGTCAACGATAACAAATTAGAAATACATGATATCTGCCTCTTCCAGCTTATGAAAAACAAGAAAAAGCTTACAATGACCATCCATATCATTCGAAAAGGCGAGTGCAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MGDQKRSFINVMIGDFVAVPTKFANFIRGQISEVVKLEVPNGKTYDVHVAKEHNELVLRSGWGAFARDYELKQCDILVFTYSGSSRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMSYHDNHLQSPSESSSFFNISLPPHSPFQELSGTILKMFAKNVQGLISGVAKLEVPDGKTYDVEISKEHNELVFRSGWEVFAIAYELEQGDILAFGYSGNSHFKVQIFNPSNCEKELSCVVMNRSISDDNHRQSPRRERMNKPSTTCMDCITNHYWLHMDDRERYFFKVMMSVSDIKDELAIPKKFAANVRGKIPEQVRLEVSDGKMYNVQVTEEQDELVLRSGWENFSSTYQLKHGDLLVFIHSGHSHFKVLIFDPSCTEKEFSCVVTDNTSHVHERSISHDNHLQSPRSEILGKNYSLCSSRKRSRMNPADYPSQRPDVPSSEDIKDPMSSGGLQKSKKSCYVLPMLYNMTSAQEAEVLALEKKIQPQIPLYITAMDKTSVASGSLVFCKNYAVRYLLDQNRTIKLCQSGGSQTWDISLDMDTDDLYALSTGWLDFFRGNLLQEGDICVFEASKSKRGVALTFHPFKESHCPKSSEYTLSTKSPTRRVPKRDYFATNLTNLTDQQERKVKNKIKSIQSDIPIFLSVMRSSNCTRQSSLCFSVKYASKYLPHKDQNMRLRLPETKYKCKAALHIDTSTNLHKLLKGWGKFVNDNKLEIHDICLFQLMKNKKKLTMTIHIIRKGECS</aaseq>

Gene Sequence

<dnaseqindica>1..51#176..513#1468..1525#2028..2344#2693..2816#3209..3626#3714..3919#4130..4397#4525..4712#4861..5124#ATGGGTGATCAAAAAAGGAGTTTCATCAATGTTATGATTGGTGATTTTGTGGTAAGACCTAGTAACTGTTTTTCCCTTGATACTTGGATGATCATACCTTTCTGTCCTAATGGCCTTCATGAGCCATGAGGTGCACTCTAAATTGGATGTTGGTCTTATTTGTCTATTCCTGCAGGCAGTACCAACAAAATTTGCAAACTTTATCAGAGGGCAGATATCTGAAGTAGTCAAGCTAGAGGTGCCAAATGGTAAAACATATGATGTTCACGTTGCCAAGGAACATAACGAGCTGGTCCTTCGATCTGGATGGGGGGCATTTGCTAGAGATTATGAGCTCAAACAGTGTGATATATTAGTGTTCACATACAGTGGGAGCTCTCGCTTCAAAGTTCGAATCTTCAATCCAAGTGGTTGTGAGAAAGAGTTATCCTGTGTCATGATGAACAACACTCCTTGTGGCCATGAAGGGAGCATGTCTTATCATGACAACCATTTGCAATCACCAAGTGAAAGGTTGGTGAAAAGCATTTTGTTTTCCAAGAAGCAACATTCTGTGGAACTCTATTATGTCATATACTTAACTATCTACAATTATAAATTAGCAAAAATACTACTCCCTCCATTCTTTTTTGTTTGACGTTGGTTAGCTCAAAATTGAACCAACCATTGTCAAACATTTGGAGAAGGAGGTACTTCCCCCGTTTCAGGTTATAAGACTTTCTATATGTTAATGAATTCATTAACATATATATGAATGTGAGCCAACACTAGAAAGTCTTATAACCTGAAATGGAGGTAGTAGTATTTTTGAGTGCAACTTGCCACATAGTTGCATGCCTCCACTTATTTCATTATTTCATGATAACCATTGGTTATGTGTACACAGCTGTGGATGGATTTGATTAAGAGTCTCTCTTAAAAAAATCATCTCAATTAACAAAGTCTTTTCACAGCAGGAGCATGTCTCATACAGTATGCATGGAGTGTACTGCAAGTTGTTATTGGCACAACATGAATAAAAGGCGTTTCTTCGTTGTTATGATGGATGTGGGTGATTTCCAAAAAGAACTGGTTAGGCCTTGTCATTTACGCTGTTAATGAGCACCAAGATATATCTTATATACTTGTTATGATATTCATTTTGGGGAATTTGAGAAACTGGGTTAGCAATTTGGTAATCTGATAGTTCTAAAACTTTTTTTTTTTTGCTAGGAAGAAGTTGCATTAATCAGAAATAGAACCCTTACATTAATTCTTGATGGATTAGGATACGCCTGTGCTTACATGACCAAACCAAAAGGCTATCTAAAGCCCCCACATGACCCACATTAGCAAGTTCATGACTAACTCTATTTTGATCATCAAGTAATCCTCTGAATTTTAATTGTCGTTCCTCCAGATAGCAATCCTCATGTTCCAGTATTCAGGAACAATAGATACGACTGTTCCCTGTCCTTGCTCTTGCAGCTCTTCATTCTTCAATATATCGCTGCCACCTCACAGTCCGTTTCAAGAATTATCTGGAGTAGGCTCCACTAGCTTGCTAGTTTCAGATCCTCCCAACATGCAACAGTTCTGCCTCCGGTGCTCCTGGACAAACCCGAAGCGCCTTGCAAAGCCATCATTAGCCATAGCTTCACTGAGCCATCAACATTTAGCATTTGACAAGTAGTCTGAGAAACAAAAATCATGTAAACTCTTAGCTACTGAATTCAGCAGCACAGACTGGTTGAACCAAAAAAGGGAAAAAAAATGATAAAACAGGACACGGTGTATGTTTATTCTAAAGATAGAGAATGACACTTTGAAGGTAGAATCCTTCTTCCCCGCAAAAAAAAAAAAGGAAAAAAAAGAAGAAGGTAGAATCCTTCTTCTTTTTTCCCCTGTTTCATGAGGCTTTGATTTGTTCCTAAGAACAAAGTGGACTTCAGTCCTGCTCACAAATTATGTCTGTACAGCATTCTTCATTTCTTCTGTAGGTTGTGTTCTTATGTAAACGGAATGTTTCATTTTTTTTGTTCCTACAGACCATACTGAAAATGTTTGCAAAGAATGTCCAAGGTCTGATTTCTGGAGTAGCCAAACTAGAAGTTCCAGATGGCAAAACATATGATGTTGAGATATCTAAGGAACATAATGAGTTAGTATTTCGATCTGGATGGGAGGTGTTTGCCATTGCTTATGAACTCGAACAGGGTGATATCTTGGCTTTTGGTTACAGTGGGAACTCCCACTTCAAAGTTCAGATATTTAATCCAAGTAATTGTGAGAAAGAGTTATCCTGTGTTGTGATGAACAGGAGCATCTCTGATGATAACCATCGACAATCACCCAGAAGGGAAAGGTTGGTATAAATGTTGAAGGGGTAGATTTAGTTACCTATTGTGCATTCTTAGAAGCATATTTTTGTCTGCTCATCATTTTCTTATTTCTATATGTACCATTATAAATTCCCAACATTGCTGAAGTTTATTTTGAAGTGTTATTTATCTTTGCCTCAGTACTTGTTTATGTACTGCTATAATCACAATTTGGTTATTCATATTGAACTTCTCAGTGTTGTTCTCTCTGTAAAAAAAGCTTTCAATGTGTTAACTATGTGAGGGTGACGCGTGCATGCATATGCTTATGGACTTTTTTCCGATGTTCACGAAGAATTTCATCATAATAAGCATTGTAAATGTGGATACAGGATGAACAAGCCTAGCACAACATGCATGGACTGCATTACAAATCATTATTGGCTCCATATGGATGACAGGGAAAGATATTTCTTTAAGGTTATGATGAGTGTGAGTGATATCAAGGATGAACTGGTAAGATCACATCTATTATTCTGTTCTTGTACACAAAATTTATATTTTAGATTGCTTATTTTGGAAAAGTTGGTGACCTTGATTCCTTGAGGTTGGGAGTACGACAGTCAGTTTTGATTACTGATAACCATGCTTGATTAAAATTCATCAATGCACAAAGCATGTCAGAATAACCATATCTATTTCGATATTTGACAATAGAAAGCATGCAGGCACTTGGTTTTCTAGTGAAACTAGTAGCATAGGCCTGTTTTTTTCCTATATATATAAAAGAAGGAACTTTAGGCATGATGGCGAACCCTTCTTTTTTGATAACAAGGACAGTGGGCCCATTAGAATTGATTGTGTTTACAGGGACTTGTATAAAAGCTCTCTTTTGTTTATTACCATAGGCTATACCGAAAAAGTTTGCGGCCAATGTCAGAGGGAAGATACCTGAACAAGTCAGACTAGAAGTGTCAGATGGTAAAATGTATAACGTTCAAGTTACTGAGGAACAGGATGAGCTGGTCCTTCGATCTGGATGGGAAAATTTTTCCAGTACTTACCAACTTAAACATGGTGATCTCTTGGTGTTCATACATAGTGGGCACTCCCACTTCAAAGTTCTAATATTTGATCCAAGTTGTACCGAGAAAGAGTTCTCCTGTGTTGTGACGGACAACACTAGTCATGTGCATGAGAGGAGCATTTCTCATGATAATCATTTGCAATCACCAAGGAGTGAAATCTTGGGAAAGAATTATAGTCTTTGCTCTAGTAGGAAACGGTCAAGGATGAATCCAGCAGACTATCCTTCACAGAGACCAGGTAAACATTTGAAGTGTACAATCTACATTTGCAACATTGCTTACATTGCCTATGTGTACCAAAATTTACATAGTTGGTGTACTGCAGACGTCCCATCTTCTGAAGACATTAAGGATCCCATGAGTTCAGGTGGCCTCCAGAAGTCAAAAAAGTCTTGCTATGTTTTACCAATGTTGTACAATATGACTAGTGCACAAGAGGCAGAAGTTCTCGCTCTTGAGAAGAAAATTCAACCTCAAATTCCACTGTACATCACAGCTATGGACAAGACAAGTGTGGCAAGTGGATCACTGGTATGTTTTTTATTTTTTTTGTATTCGGTATGGTGCAACTTTTTGCTAGTTTGAACTTTGCTAAATTTTGGTGTTCTGCTCTAGTCAAGAAAAAAAAGAGAGAAAAACTCAGGTTACATTTAGGACTTGATTAGTGTTAGTTGAGTCTTGAGTCCTTCAAATATACTAATGAAAGCTTGTAAAATAATATATTCCTGATCATTTGTATAGGTCTTCTGTAAGAATTATGCTGTCAGATATCTTCTTGACCAAAATAGGACCATCAAACTATGTCAATCTGGTGGTAGCCAGACATGGGACATCAGTTTGGACATGGACACTGATGATCTATATGCCCTCTCTACTGGCTGGTTGGACTTCTTTCGCGGCAATCTGTTGCAAGAAGGTGACATCTGTGTATTTGAAGCTTCAAAGAGCAAGAGAGGAGTGGCATTAACATTTCATCCTTTCAAAGAAAGTCATTGCCCAAAGTCATCAGGTTATCTATATAGCATTTGGAATAGCCTAGATTTTATTTTCTATGAGCGCATCTCTTTCTCTTTTTTTTTCTGTTGACAACACATTTCTGACTGACGTCCATGTTTTTGATTGGGTCTTCTCTGCAGAATATACCCTTTCCACCAAGAGTCCTACACGTAGAGTTCCTAAGCGGGACTATTTTGCAACAAATCTTACTAATCTAACTGATCAACAAGAGAGGAAGGTTAAAAACAAAATAAAATCTATACAGTCTGATATCCCCATTTTCTTGTCTGTCATGCGCAGTTCCAACTGTACCCGTCAAAGTTCTCTGGTGAGTCATCATTGAATTTGTTTGAAATTTTATTCCTGTTGATTTGCAAGTTGGAACATTTAAAATCATGCATGAAATGGGCAGCAAAATTCGCAACCTTTTCCTTTACTCATATTATCAGGGAAACTTACATTTTCCATATATTCAGTGCTTCAGCGTGAAATACGCTTCAAAGTATCTCCCACATAAAGACCAAAATATGAGGCTGCGGCTGCCGGAGACGAAATATAAGTGCAAAGCTGCGTTACATATCGACACAAGCACCAATCTTCACAAGCTTCTCAAAGGCTGGGGGAAATTTGTCAACGATAACAAATTAGAAATACATGATATCTGCCTCTTCCAGCTTATGAAAAACAAGAAAAAGCTTACAATGACCATCCATATCATTCGAAAAGGCGAGTGCAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037705