BGIOSGA037706

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Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037706| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037706, complete gene.| tag = OsI_389...")
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Gene Name

BGIOSGA037706

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037706, complete gene.

LocusTag

OsI_38945

Ensembl Transcript ID

BGIOSGA037706-TA

Ensembl Protein ID

BGIOSGA037706-PA

Length

2232

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20293640..20295871

Sequence Coding Region

20293640..20293699,20293952..20294375,20294453..20294664,20294848..20295115,20295202..20295392
,20295611..20295871

Genome Context

<gbrowseImage1> name=IndicaChromosome12:20293640..20295871 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:20293640..20295871 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAATCACGGAAAGAGTTTCATCAAGGTTATGATTACTGATTTCAAAAATGGAGTGACTATACCAGCGAAGTTTGCACGCAATTTCGGAGGGCAGATGTCTGGAACAGTCAAACTCGAAACTCGCAATGGTAAAACATATGAAGTTCAAGTTGCCAAGGAACTAAACAATCTTGTCCTCCGATCTGGATGGGAAAGATTTGCCAGTGCTTATGAGCTTGAAAAGGGTGACATTTTGGTGTTCATATACAGTGGAAACTCCCACTTCAAAGTCTGGATTTATGATCCAAGTGCTTGTGAGAAAGAATTACCCTGTATCATAACGGAACAGCTTCCTCGTGTACAACAAAGGAGCATCTCTCATAATAATCATACTCAATTGAAAAGGAATGCAAAGTCAGCTAAGCTGTATGTTGATAGCTCTGGTCACAGTAAGGAAACTTCAGAGACAAATCCAGCAAACTCTCCTTCATGGAAACCAACTGAAAGGGTCCCATCTTCTGAAGAACTTGATGAACCCGTGGATTTGGCCAACGTCCAGAAGGCAACCAAGTCTTTCTATTCGTTACCAAGGATGTGCAATATGACCAGTGCACAAAAGGCTGAAGTAGATGCTCTTGAGAAGAGAATTAAACCTCAAATTCCATTTTACATCACAGTCATGGACAAAGCAAGTGCGACTGACGGATTACTGGCCATCTCGAAGGATTATGCTGTCAGTTATCTTCTTGACAAAAATGAGACCATCAAACTATGTCATTCTGGTCGTAGCATGACATGGGATATCAGTTTGGACATTGACACTGATGATCAGTATGCCCTTTCAACTGGTTGGTTGGACTTCATTCGCAACAATCATTTGCAAGAAGGTGATATCTGCGTATTCGAAGCATCAAAAAACAAGAGGGGAGTTGCATTGATATTTCATCCTTTGAAGCAGAGCCATCACCCAAAACCGCCAGGATGTGTTCCTTCCACCAAGTTTCCTAGGCATGGAGTTAGTAAGCCTAACTACATTGTGTCAAGATTTACCACTCTATCTGGTCAGCTTAAAATAAAAGTGGAAGCCAAAGTACAAGCTATTCAATCCGAAATCCCCATTTTTGTAGCTGTCATGCGGGAAAGCTTCATTAGAGGCAGGTCAAGATATATGTGCTTCAGTGCAAAATATGCTGCCAAATATCTCCCACGGGAGAAGAACAAAATTATGAGTCTTCGACTGCCCAATAAGAGCTACAAGTATAAGGCTGTATTCAAGATCAATAACAAAGTTCATAAACTTGGTGGAGGATGGGGGAAATTTGTCGATGACAACAAAATAAAACTAGGTGATATCTGCCTCTTCCAGCTCATGAAAAACAAGAAGAAGCTCATGATGATGGTCCATATCATCCGAAAATCTGAGTTCTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MDNHGKSFIKVMITDFKNGVTIPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILVFIYSGNSHFKVWIYDPSACEKELPCIITEQLPRVQQRSISHNNHTQLKRNAKSAKLYVDSSGHSKETSETNPANSPSWKPTERVPSSEELDEPVDLANVQKATKSFYSLPRMCNMTSAQKAEVDALEKRIKPQIPFYITVMDKASATDGLLAISKDYAVSYLLDKNETIKLCHSGRSMTWDISLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASKNKRGVALIFHPLKQSHHPKPPGCVPSTKFPRHGVSKPNYIVSRFTTLSGQLKIKVEAKVQAIQSEIPIFVAVMRESFIRGRSRYMCFSAKYAAKYLPREKNKIMSLRLPNKSYKYKAVFKINNKVHKLGGGWGKFVDDNKIKLGDICLFQLMKNKKKLMMMVHIIRKSEFC</aaseq>

Gene Sequence

<dnaseqindica>1..60#313..736#814..1025#1209..1476#1563..1753#1972..2232#ATGGACAATCACGGAAAGAGTTTCATCAAGGTTATGATTACTGATTTCAAAAATGGAGTGGTAAGACTGCCAGTTATGCTATTCGTGTAGTCAAATATGTATCTTCTATAGTTTGATAATGTGCTGATCTTAATTCTTAAAATTGGAGACAGAAATTCAAAACTCAAATTTGCTTTTGAATAGTTGTTATCGGTACCTGTGTGTTTCATCACCATTTTAAGAAAGGAAATTACTGCAATTTTCATTCTCGACGTTACTGCAAATTATCTGTGGTTCATATATCCACAAAAAATAATTCTTTTATTCCTGCAGACTATACCAGCGAAGTTTGCACGCAATTTCGGAGGGCAGATGTCTGGAACAGTCAAACTCGAAACTCGCAATGGTAAAACATATGAAGTTCAAGTTGCCAAGGAACTAAACAATCTTGTCCTCCGATCTGGATGGGAAAGATTTGCCAGTGCTTATGAGCTTGAAAAGGGTGACATTTTGGTGTTCATATACAGTGGAAACTCCCACTTCAAAGTCTGGATTTATGATCCAAGTGCTTGTGAGAAAGAATTACCCTGTATCATAACGGAACAGCTTCCTCGTGTACAACAAAGGAGCATCTCTCATAATAATCATACTCAATTGAAAAGGAATGCAAAGTCAGCTAAGCTGTATGTTGATAGCTCTGGTCACAGTAAGGAAACTTCAGAGACAAATCCAGCAAACTCTCCTTCATGGAAACCAAGTAAATATTTTGTTTACATTTCTAAATAACTGCACTGCCTTGTACTAAAATTCACATTGTTGGAATTACAAATATAGCTGAAAGGGTCCCATCTTCTGAAGAACTTGATGAACCCGTGGATTTGGCCAACGTCCAGAAGGCAACCAAGTCTTTCTATTCGTTACCAAGGATGTGCAATATGACCAGTGCACAAAAGGCTGAAGTAGATGCTCTTGAGAAGAGAATTAAACCTCAAATTCCATTTTACATCACAGTCATGGACAAAGCAAGTGCGACTGACGGATTACTGGTATGTTTTAAATTTATGTTGTGTACTCAGCAGGTGAAATTTTTGTTGATTTGAATTTTCTAAAACATTTGTGTTCGTTAGGACCTGTTTGATAAGTGCAACTTGTGTCTTGAATTATTCATCTGTACTAATGATTAATGAAAGCTTGTAAAAAATGATATAGTCCTGAATCATTTGGAATAGGCCATCTCGAAGGATTATGCTGTCAGTTATCTTCTTGACAAAAATGAGACCATCAAACTATGTCATTCTGGTCGTAGCATGACATGGGATATCAGTTTGGACATTGACACTGATGATCAGTATGCCCTTTCAACTGGTTGGTTGGACTTCATTCGCAACAATCATTTGCAAGAAGGTGATATCTGCGTATTCGAAGCATCAAAAAACAAGAGGGGAGTTGCATTGATATTTCATCCTTTGAAGCAGAGCCATCACCCAAAACCGCCAGGTTACCCTTGAGATATTTAATTAATCTTTGGAGCACATTCTGAGTTTCTGACTAATGACCAATTTGTGAATGTTTTTTTTTTCCAGGATGTGTTCCTTCCACCAAGTTTCCTAGGCATGGAGTTAGTAAGCCTAACTACATTGTGTCAAGATTTACCACTCTATCTGGTCAGCTTAAAATAAAAGTGGAAGCCAAAGTACAAGCTATTCAATCCGAAATCCCCATTTTTGTAGCTGTCATGCGGGAAAGCTTCATTAGAGGCAGGTCAAGATATATGGTGAGTTAGAATCTCTATTTTACAAAGTAAAAAATAAATATAAAGTTAAAAGCCAAGTTTATTCTCTGCTGATTCAGAAAATCATAGAGGAGAAAGTTCTCACTGGTTTCCTGTCATACTTGCTACTGTTTTGCTTATACTATTACTTACATTTTCCATATTCAATCTCTGTTACTATTTTGCTTGTATTTCTACTTACATTTTCCATATGCAATCAGTGCTTCAGTGCAAAATATGCTGCCAAATATCTCCCACGGGAGAAGAACAAAATTATGAGTCTTCGACTGCCCAATAAGAGCTACAAGTATAAGGCTGTATTCAAGATCAATAACAAAGTTCATAAACTTGGTGGAGGATGGGGGAAATTTGTCGATGACAACAAAATAAAACTAGGTGATATCTGCCTCTTCCAGCTCATGAAAAACAAGAAGAAGCTCATGATGATGGTCCATATCATCCGAAAATCTGAGTTCTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037706