BGIOSGA037730

From RiceWiki
Revision as of 08:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037730| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037730, complete gene.| tag = OsI_389...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037730

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037730, complete gene.

LocusTag

OsI_38985

Ensembl Transcript ID

BGIOSGA037730-TA

Ensembl Protein ID

BGIOSGA037730-PA

Length

5489

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20622773..20628261

Sequence Coding Region

20622773..20623255,20624722..20624773,20626707..20626855,20626941..20627228,20627338..20627526
,20628061..20628261

Genome Context

<gbrowseImage1> name=IndicaChromosome12:20622773..20628261 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:20622773..20628261 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGGAACATCGAGAATCCTGCGGAGGACATGAGTGGGATTGCCAGTAATCTTGATAATGAGGAGCAGGCGATTCCTCTCAGTGATGTGCCTGAGCAGTACAAGGAAGATCCAGAAAATACATATGACGAAGAAACCAAAGACTCAAGCTATGAAGAATCAGGGATCCCATACAATGAAGATCAGGTGAACATAAATGATGGAAATGTGGGGCATCAGCATGAAGAGGACCAAGCTATCCCCTCAGAAGAAGGGCATGCCTATGGTGGAGAAGCTCAGGGAGAGCAGCAGGCCAATGCAGTAACTGATGAGAAGAAATGGCCAGGTTGGCCTGGAGAAAGTGTGTTCCGTATACTTGTTCCAGCCCAAAAAGTGGGCGCTGTCATTGGCCGAAAAGGGGAGTTTATCAAGAAAATGTGTGAGGAGTCCAGAGCTCGCATAAAGGTGCTTGATGGACCACCAGGGGTACCAGATAGAGCATCTTTTGATTATCGGATGAAGATCCCTGTCAAGAAGCTTCATATGTTGTCCGAAAGTGTACCACCTGTTGCATTAAGTGACGACCGAGTTGTTGAGATACAAGGTGAACCTCTAGATGTCCACAAAGCAGTGGAACTGATTGCAAGTCATTTAAGAAAATTTCTTGTTGACCGCAGTGTGCTCCCTTTGTTCGAAATGCAGATGAAAGTGCACAATGCGCACAGAGAGCAACCTATGCCACCTCCTCAGACGTGGGGTCCTCCTCCACCGTGGGGTCATCCATCAAACGTTCCTCCTGGTGGCCCAGGTTATGGTGGTAATCCACAGTTCATGCCTCCTCGGCCTCAAGACCACTATTATCCTCCTCCTGATGTACCTCCTGTCGAAAAGCAACCACACTATGGAATTTCTTCATATGGCCGTGATGCACCTCCTACTGGTGCTCCTCCTGCCTCAGGGAATCAACACCCACCACATGGTTCTTCTCAAATAACACACAGCATGCAAGTTCCTCTTTCCTACGCTGATGCCGTGATTGGGGCAGCTGGTGCTAGTATCAGCTACATTCGCAGGCATAGTGGTGCAACAATAAGTATTCAGGAAGGTGTTCCTGGAGAAATGACTGTGGAGATATCAGGAAGTGCTTCACAAGTTCAAACTGCCCAGCAACTGATCAAGCTTCTCCCCAAGGCCCCCCACAAGCTCCTGCTCCTCCTGCTCAACCAGTCGACACGGGCTACAGCTCCTACCCACCGTACGGAGGAACATCATACGGATCTCCTCCTGGCGGCGCAGGTCCTCACAACGGTGGAAGCTATGGCGGTGCGCCACCCCCCTACCCTCCGAGCTACGGATACTAGTTGTTTGGAAGCGCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MDGNIENPAEDMSGIASNLDNEEQAIPLSDVPEQYKEDPENTYDEETKDSSYEESGIPYNEDQVNINDGNVGHQHEEDQAIPSEEGHAYGGEAQGEQQANAVTDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRASFDYRMKIPVKKLHMLSESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFEMQMKVHNAHREQPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNPQFMPPRPQDHYYPPPDVPPVEKQPHYGISSYGRDAPPTGAPPASGNQHPPHGSSQITHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQEGVPGEMTVEISGSASQVQTAQQLIKLLPKAPHKLLLLLLNQSTRATAPTHRTEEHHTDLLLAAQVLTTVEAMAVRHPPTLRATDTSCLEAP</aaseq>

Gene Sequence

<dnaseqindica>1..483#1950..2001#3935..4083#4169..4456#4566..4754#5289..5489#ATGGATGGGAACATCGAGAATCCTGCGGAGGACATGAGTGGGATTGCCAGTAATCTTGATAATGAGGAGCAGGCGATTCCTCTCAGTGATGTGCCTGAGCAGTACAAGGAAGATCCAGAAAATACATATGACGAAGAAACCAAAGACTCAAGCTATGAAGAATCAGGGATCCCATACAATGAAGATCAGGTGAACATAAATGATGGAAATGTGGGGCATCAGCATGAAGAGGACCAAGCTATCCCCTCAGAAGAAGGGCATGCCTATGGTGGAGAAGCTCAGGGAGAGCAGCAGGCCAATGCAGTAACTGATGAGAAGAAATGGCCAGGTTGGCCTGGAGAAAGTGTGTTCCGTATACTTGTTCCAGCCCAAAAAGTGGGCGCTGTCATTGGCCGAAAAGGGGAGTTTATCAAGAAAATGTGTGAGGAGTCCAGAGCTCGCATAAAGGTGCTTGATGGACCACCAGGGGTACCAGATAGAGCAGTAAGTTTTTTCTCTCTTCTTAAGCTGGACTAGTTTCTACTATTGTTGTTTCAGTCAGTATGCGCAGTAGTGTTGTAGGCTTTGAATGCACGGTACGCTTGTTTCAGAGAACCAGTCAAGTAGATATTTGTAATATATGGGTGCCATTTTTGTCCTATTTTATAGTTGTATTGAGGAATGAATTTAGCTAGGAAGCATTGTAGTTACAGGTGGTTACAGCACTATGCAATTTCTTGATCCCCCACACCATGTATTATATTCACATTCAACTGCGATGGTCTATAAACTGTTGTATTTTCTTTTACCAATCTATCTGATAGTTGGTGAGCCTGTTGTCTGCAAGTAATGGAGTTGAAAATAAATTGTGTTTTGACACAGGAGACAGAAATGAAAGAGGAACTAGCTGGCATTTTTACATTATATAATATGATGCCATTTCAATAATAGTTTCAAATTAATGCTGCTCTAACTTGTGACCAAGTGCTTGAGTAGGCTTGCTTGCTTTTCTTTACTCCCTGAGAAGGGGATGCAGTTTTATTAGAAGTTTAAGAACATCTTGGTTAGTGACTATGGTGCTGTAATGCTCCTAATAAGTACTGTGTTGTTATCATTACTAAATCAAGTGGTAGGTATAATATTTTGCAACATGTGATCATCTAGGACGTTGTAGTGGGTTAAATGTATAATTACTAATAAAAGATAGTGCTGTAACTACAACCTTCCTGTATAGAATGGCTATATGGTTGTTTCAATTGGTGAAATCTATCTCAGCTTTGAAACCTCAGTTTGTAGGGAAACAAAGATGACTATAGATTTTTGCATATATTAAGTAATTTTGACACAAACAAATATTCTTTGTAGAAAAAAGGTTATGACTGAATATCAGATCGGAACACTGATTATGGCCAATCGGTGAACTGTATGTACAAGGGCAAGAGAAAATTCTAACCCATCTTTCAAATTTGAGTTTGGATGCTAATGTTAATAGGTTTTGGACTGTACATGGATCAAGACATCAAGTAGTTAATGCATATATTATAACTATAGATGCTCTTGCCTCTATCTCAGTAAATATTCTGAATGATTATCAGATGAGAACAATGATTTGTTCCATTCAGGAGAATCATGTGTAAAGGCAAATAAAAGAACATCAAATATTGGGCCGTCATCCCTTGATGTACTTCATTGTATAACTATTAAAAAATATTCACTCTACTTGTCTTAAAAGTTTCTCCGCAACTAAAGAAATTCAAACTAATGGATTGAATTATCAAAAAAATGAAGAAACTGACATTCAAGTACGAAACTTAATAGTGTCGTCGTGTCGATAGCAATAACAAACTACCTTTGCAGGTTCTCACTGCAGTGTAAGGCCTCAAGTCGAATTGTTTATGTATCAAAAATAGACGAGCCGTCATGGTTATCAAAGTTCAGTTTTGTGCTCCTGTGCTGCAAATACTGTTAAGTCTTTTGATTATCGGATGAAGATCCCTGTCAAGAAGCTTCATATGTTGTCCGGTAATTTCATGACCTGCTTGATTTTTTGACCAAACGGGAATCAGTTTGTAAAGTTAATAAAAGATTAAAATAACTAAAAAAACCTTAAACCTAATCGGTTCCTAAATAATAAAAGTGATAACTGCAAGTGATACCTTTCAAATGTGAAGTAGTATCACATGCATCGATATTTTTGGAATTGGTTCATTTGAAGTAGTGCTCTTAAATCACTATAATTTATCAAGAGATGAGTGAGTTATATACCCAAGTGAACTGAAATGCAACGGCACATTTCTATCCCTTTCCCGGATTATAAGATTGCCCCCATTTAGAAAATGTTAGCGTCCAACAATGGGTCGGAATTTTATTACCCATAGACATCAGTTTTGTGAGTAGTGATGCTAACTTAGATGGATAAACATGCTAACCAGAAAATTGAGGAATGGAGAACTTGCTGGTCGTAGTGTCACACTCGTTAAATGAAGATAGACTACTCTATGAATTCTTGATTTTATTACTTAGGCAAAAATAGTTTGTGTTTTGATGGATTTTAATCAGGATTTTATTTTAAGTTATGTGGATAAATATATCAACGATAATGTTTTTTGGCAATATCTTTTAAGAGCATTATCAAAAATATTTTGCGAGAATTTGTAAATAATTTGTTCATTATATTCCATAACTCAGCTCAACAACATCAAACTAGCACTAATTAGTATTAGTATGCCTAGGATGAGTTGTTGTATGATAAGAAGGAAGTGGAGAGTATCCTACTATACTTTGGCAGTCCTTGTCTTGGCAATGCCATGCTGAACTGTTTAATATTTTAGTCTTTATGGCAGACATTTTTTGGGTGTGTATCTGCAACGTTTCAAGTGAAGGCAACCCATGCATAAATGAATGAGTTGCAACCCCACTAATAATTTCAGAATAAATATAACCGTGCAATCACATCTGTCTAATGCGGATCGGACATATATTCCCTGCCCTTGACCCTTTTGTTATCATGCTAGTAACATTTTTTCTGTGCTTTTTGCACATTGCTGTTATTGACTCTCCAATGGTTGCTCATCTGTATGTACCTGCCTGCTGACATAAATACCATTTTCTTTCTTAAAGGTCATGATTTCAGCAAAAGATGAACCAGATGCACCATTAACTCCTGCTGTTGATGGATTGCTTAGAGTTCACAAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAATCCATACAGGATGCTTCTAAGTGTGTTCTCCGAATTCTTGGTGAGCTTTGACATTTTTTTCTCCCATAACGTACATTATTTCTAGTATATTCTATGTTTTGTTTTATTCTGTTTCAAAACTGGAGTACTTTTTAAATTAAACAGTGATAGATCTACTAAGGCTCTTTCTTTTTTTCATATCTTATATGATTATTCTCTTAATGAATTAGGAAATATGCATTTTTAGGCATACGTTGTATATACTCAATGGATGTTTTTATAACCCATTCTCTCAAGGACGGATATTTTGCACTTCATCCAATAATGATTTAGCCACATACAAATCTATTCATGGTTTTAATGTTCTGCGCTTAGCAGACTATATAGGATCGACTATTTTCCTTTTTATGTATTAAAAAAATACATTAATGCATGCATGTCTGAGGCAAAGGCCATCCTTTGAGGACTCAAGCATGCTGGACATATGCCATATAGCATTATAATTCCCCTTTGATTGTTGGGCTTGTTATTCTAGCTTGTTCCTGACTTTACCACTGTTTGGTTTGCTGGGTGATGTTTGGTCACTTGGTTGTTTGTCTTTCAATTTTTATTAGGCTCCTATAACTACCGCAACTAGTTTCACAAGAATTCATGCACGACATATTTTATAGAGCATTTAACATTCAGTTTCAATAGTTTAACATTTCCTTACATCTTTTACAGAAAGTGTACCACCTGTTGCATTAAGTGACGACCGAGTTGTTGAGATACAAGGTGAACCTCTAGATGTCCACAAAGCAGTGGAACTGATTGCAAGTCATTTAAGAAAATTTCTTGTTGACCGCAGTGTGCTCCCTTTGTTCGAAATGCAGGTAAGTTCATTTCTTTTATGCAGTATATTACATACTCTTACTTTTGCATGAGTGGTCGATAATCATAAGTTGCTTTCCTTGACAGATGAAAGTGCACAATGCGCACAGAGAGCAACCTATGCCACCTCCTCAGACGTGGGGTCCTCCTCCACCGTGGGGTCATCCATCAAACGTTCCTCCTGGTGGCCCAGGTTATGGTGGTAATCCACAGTTCATGCCTCCTCGGCCTCAAGACCACTATTATCCTCCTCCTGATGTACCTCCTGTCGAAAAGCAACCACACTATGGAATTTCTTCATATGGCCGTGATGCACCTCCTACTGGTGCTCCTCCTGCCTCAGGGAATCAACACCCACCACATGGTTCTTCTCAAGTTAGTTGCTAAAAATTTGACCACTGTGAACATAATGAATTGTTTATGCGCCTGCTATAAAGTTTCTTTTACTGAGTTTTCCCCCATATATGTTGTTTTTATTTGACAGATAACACACAGCATGCAAGTTCCTCTTTCCTACGCTGATGCCGTGATTGGGGCAGCTGGTGCTAGTATCAGCTACATTCGCAGGCATAGTGGTGCAACAATAAGTATTCAGGAAGGTGTTCCTGGAGAAATGACTGTGGAGATATCAGGAAGTGCTTCACAAGTTCAAACTGCCCAGCAACTGATCAAGGTATTCTTTTTTGTTTCGTAAATTGCGTCAGCATTATCACTGTTTTCACAGAACAACAAAGAAAAAACATTATCACACTGTCTATGACCTGCATCTTGGCTAATTATTATAATATGCTGATGATCTATTTGCGAGTCTGATGTTCCTGAGTCTACCTCTTGCATTAATTAGATAGAAGTGCTGCATAGAAGAAACTCGGTAACTCATTGGATTGTATTATTAGTAGGATAAACCACTACATACGCAGCTCTTTTTTCATCAATTGTTACAAAATGTGTATGGAGAGATCTACTCGGTATTATACCGAAGTGGTGGGGGGAAATCCTCTGTTCATATCTTCATATTGATAATCAGGCTATCCTCATTTTAATGATGGTCACTGGTTAATCAAAATCATTGAACTTAAAAACTTACCGATACCCAGCTCAGACAAAGAAGGCTATCTACAGTCCTGCACTGATTGTTATTTATATTTTTTTAGAAAAAAAATCTCGTATTAACAGCAGCATCTCTTGCAGAATTTCATGGCTGAAGCTTCTCCCCAAGGCCCCCCACAAGCTCCTGCTCCTCCTGCTCAACCAGTCGACACGGGCTACAGCTCCTACCCACCGTACGGAGGAACATCATACGGATCTCCTCCTGGCGGCGCAGGTCCTCACAACGGTGGAAGCTATGGCGGTGCGCCACCCCCCTACCCTCCGAGCTACGGATACTAGTTGTTTGGAAGCGCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037730