BGIOSGA037751

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Revision as of 08:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037751| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037751, complete gene.| tag = OsI_390...")
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Gene Name

BGIOSGA037751

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037751, complete gene.

LocusTag

OsI_39029

Ensembl Transcript ID

BGIOSGA037751-TA

Ensembl Protein ID

BGIOSGA037751-PA

Length

5103

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21131117..21136219

Sequence Coding Region

21131117..21131455,21131939..21132060,21132160..21132307,21132598..21132735,21132846..21132941
,21133027..21133086,21133221..21133313,21133724..21133835,21134079..21134183
,21134262..21134398,21134735..21134960,21135042..21135214,21135340..21135456
,21135554..21135796,21135891..21135986,21136202..21136219

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21131117..21136219 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21131117..21136219 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCCGCCTCCTCCTCCTCCCCCGCCGCCGCAGCCGCCATGGCGGCGCCAGCCTCCTCCTCGCGCGGCTCCTCTCCTCATCCTCCTCCGAGGCTGGCGGTGGTGGGGCGGTGGAGAAGGTGCTTGTGGCGAACAGGGGGGAGATCGCGTGCAGGGTGATGAGGACGGCGCGGAGGCTCGGGATCCCCACCGTCGCGGTCTACAGCGACGCCGACCGGGGGGCCCTCCACGTGCGCGCCGCCGACGAGGCCGTCCGCCTCGGCCCGCCGCCCGCCAGGGAGAGCTACCTCAACGCCTCCGCCATCGTCGACGCCGCGCTCCGCACCGGCGCCAAGGCTATCCACCCAGGATATGGTTTTCTTTCGGAGAGCGCAGATTTCGCGCAGCTCTGTAAAGCCGAGGGGCTTACATTCATTGGACCACCACCATCTGCTATCCGAGACATGGGCGACAAGAGTGCTTCTAAGTGGATCATGGGTGCTGCTGGTGTACCGCTCGTCCCAGGTTACCATGGGGCTGAACAAGACATTGAGCTGTTAAAACTTGAAGCCAATAAGATTGGGTATCCAGTTTTGATCAAGCCCACACATGGTGGAGGGGGCAAGGGGATGAGAATAGTTCAAAGGCCTGAGGACTTTGTGGATTCTGTATTGAGTGCTCAACGAGAAGCCGCAGCATCATTTGGCATAAACACGCTGCTGGTTGAGAAGTATATTACCCAACCCAGACATATAGAAGTCCAGATATTTGGAGATCAACATGGAAATGTGATTCACCTTTATGAGAGAGATTGTAGTCTACAAAGAAGGCACCAAAAGATTATCGAGGAAGCTCCAGCTCCAAATGTGACAGCTCAGTTTCGGTCTCATATTGGTGAAGCTGCTGTATCAGCTGCAAAGGCAGTTGGTTACTACAGTGCTGGAACAGTGGAGTTTATCGTGGATACTCTTTCCGGAGAATTCTATTTCATGGAAATGAATACTCGGCTCCAGGTTGAACACCCAGTGACCGAGATGATCGTTGGCCAAGATCTTGTTGAGTGGCAAATACGAATTGCAAATGGAGAGTGCCTACCATTATCTCAGGAGCAGGTTCCGTTAAATGGACATGCGTTTGAAGCCCGAATATACGCAGAAAATGTGCCAAGGGGATTTCTTCCTGCTACAGGAACCTTACACCACTACAGGCCAGTTCCCTCTACCGCAACAGTAAGAGTTGAAACTGGAGTTGAAGAAGGAGATACTGTCAGCATGCATTATGATCCCATGATAGCCAAACTTGTGGTTTGGGGTGAAAGTCGCAATGCTGCGCTAGTCAAGCTAAAGAACAGCCTGTCAAACTTTCAGATTGCAGGTTTGCCGACCAATGTTGGTTTCCTCCAAGAACTCGCAGGTCATAGTGCCTTTGAAAAAGGCCTAGTCGATACACATTTCATTGAACGCTATCAAAATGATCTTCTGAGTACTTCTACTCAAGCCTTGAGTGGATCACATGAAGCAGAAGAGCTTGGTGCAATTTTGGCTGCTGCCTGCATTTGCAAGAAGGATCATGTTTCCTCTGAAGTGTCACTTCATGATAAGAAACTTTCTATGTGGTACGCCCATCCACCTTTCAGGATGCATCATTTTGCCAAGCGTCTAATGGAATTTGAGTTGGATAGAGAACTTGGTGGATCAAGTGATGATCTTCTTAAACTGTCGGTAACATATAGATCTGACGGAACCTACGGAACCTACTTCGTTGAGACTGAAGATGGTTCTTCTCCTGGATTGGATGTCAAAGTAGATAGCAGAGGTGACCATGATTTCCGGGTTGATGTTGGTGGGCTGCAAACAGACGTAACTCTAGCATTTTATTCAAAGGACAATTGCAACCATATACACATCTGGCATGGGAAGCATCATCATCATTACAGGCAGACGTTGAGAGCTGAGCAGTCACCTGATGACAGTTCTCAACCTAGCGCTTCCTCTGAGGCGAGGTCACATCCAAAGGGGAGTGTTTTGGCACCAATGGCTGGTCTGGTTGTAAAGGTTTTGCTTAAAGACGGGGCACGGGTGGAGGAAGGTCAGCCTGTCATGGTTATGGAAGCAATGAAGATGGAGCATGTTGTGAAGGCGCCTTGTGCCGGATATGTGGAAGGGCTGAAGGCTACTGCCGGACAACAAGTTTTTGACTCTAGTGTCCTTTTCACCGTGAAGGAGAACAAGCCAAATTGA</cdnaseq>

Protein Sequence

<aaseq>MASRLLLLPRRRSRHGGASLLLARLLSSSSSEAGGGGAVEKVLVANRGEIACRVMRTARRLGIPTVAVYSDADRGALHVRAADEAVRLGPPPARESYLNASAIVDAALRTGAKAIHPGYGFLSESADFAQLCKAEGLTFIGPPPSAIRDMGDKSASKWIMGAAGVPLVPGYHGAEQDIELLKLEANKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYITQPRHIEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEAPAPNVTAQFRSHIGEAAVSAAKAVGYYSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRIANGECLPLSQEQVPLNGHAFEARIYAENVPRGFLPATGTLHHYRPVPSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALVKLKNSLSNFQIAGLPTNVGFLQELAGHSAFEKGLVDTHFIERYQNDLLSTSTQALSGSHEAEELGAILAAACICKKDHVSSEVSLHDKKLSMWYAHPPFRMHHFAKRLMEFELDRELGGSSDDLLKLSVTYRSDGTYGTYFVETEDGSSPGLDVKVDSRGDHDFRVDVGGLQTDVTLAFYSKDNCNHIHIWHGKHHHHYRQTLRAEQSPDDSSQPSASSEARSHPKGSVLAPMAGLVVKVLLKDGARVEEGQPVMVMEAMKMEHVVKAPCAGYVEGLKATAGQQVFDSSVLFTVKENKPN</aaseq>

Gene Sequence

<dnaseqindica>1..339#823..944#1044..1191#1482..1619#1730..1825#1911..1970#2105..2197#2608..2719#2963..3067#3146..3282#3619..3844#3926..4098#4224..4340#4438..4680#4775..4870#5086..5103#ATGGCCTCCCGCCTCCTCCTCCTCCCCCGCCGCCGCAGCCGCCATGGCGGCGCCAGCCTCCTCCTCGCGCGGCTCCTCTCCTCATCCTCCTCCGAGGCTGGCGGTGGTGGGGCGGTGGAGAAGGTGCTTGTGGCGAACAGGGGGGAGATCGCGTGCAGGGTGATGAGGACGGCGCGGAGGCTCGGGATCCCCACCGTCGCGGTCTACAGCGACGCCGACCGGGGGGCCCTCCACGTGCGCGCCGCCGACGAGGCCGTCCGCCTCGGCCCGCCGCCCGCCAGGGAGAGCTACCTCAACGCCTCCGCCATCGTCGACGCCGCGCTCCGCACCGGCGCCAAGGTTCCGCTCGCCCTCCTCTCCTGCCCCCCACCCTTTCTCCAATCCAACCCCACCTATCCGTTCGTTAGCTGACTGAATTCCGCGGCGGCAACGTTGATGCTAACTGACAGTTGGTAGTATGTGGAATTTTGTGGTTCAGCCAATTGATTGATGGTTGCTAACTGCTAGTAAGTCGCAATGGAGTAGTGTGATGATATGATCACATTTGATTTTGGTACATACTCTACTGCGGAGCTATCATAATTGCTCAGCTCCGGGCATTGCCTAAAAAATGGAGTATGTGAAGTTCTACATGTCTTCTGCTTGATTTATTCAATGGAATCAATGCTGGTTGCTTAGGATCATGTCTTAGTTAGCATCACAACCACAAATAGGTTACTTCTACTTACTTTGTACTGCGGCATTCTAGTATGAGGCGTGCCATGATGGGGATATCGATACTTCTGAATCCTGAAAAAAAATAATATATGTTTGTAATTGTAGGCTATCCACCCAGGATATGGTTTTCTTTCGGAGAGCGCAGATTTCGCGCAGCTCTGTAAAGCCGAGGGGCTTACATTCATTGGACCACCACCATCTGCTATCCGAGACATGGGCGACAAGAGGTAAATATCTTCTTCGTCTGATTTGTGCATATGTTGCCTCCTCTTTTCTTTTCTTTTTTAATAGAACAATGTGTTCTAACGAAGCTATGTGAAAACTAGTGCTTCTAAGTGGATCATGGGTGCTGCTGGTGTACCGCTCGTCCCAGGTTACCATGGGGCTGAACAAGACATTGAGCTGTTAAAACTTGAAGCCAATAAGATTGGGTATCCAGTTTTGATCAAGCCCACACATGGTGGAGGGGGCAAGGTATAGCTGAAATTTCTTTCACAAAGGACATGCTTGTTGTAGCTATCTGCATATGCTTTTTATTTGTTCATTGTTCGTGTTCATTTCCTATTTTCCTGAAAAAAGCTCTCAGTGTAGTTGATTCGAGCATAAACCATTATGGCCAAATGAAGAACATTTTTAGAATTGTATGCTCTATTCTCATGTGCGTGCATGCCCATAATCCATTTAAGAGCGCATTTATAATGTTGCTTGTATGCGCGTTGTTCCCACTTCATCCTGTTTTCTTTTGATCTTTGCATTTTTTGAAGGGGATGAGAATAGTTCAAAGGCCTGAGGACTTTGTGGATTCTGTATTGAGTGCTCAACGAGAAGCCGCAGCATCATTTGGCATAAACACGCTGCTGGTTGAGAAGTATATTACCCAACCCAGACATATAGAAGTCCAGGTAATATTCAAGGATTTCAGTACTGCTTCAGTCATTTTCTAAACATATACTTGCAGTTGCAGTAGCCATCTGCTTTTTTTTTGTGTGTGACACCATTTCAATGGGTGAAGATATTTGGAGATCAACATGGAAATGTGATTCACCTTTATGAGAGAGATTGTAGTCTACAAAGAAGGCACCAAAAGATTATCGAGGAAGCTCCAGCTGTAAGGCTCCATTACCTGTCAATGCCCTAGGGTTTGTTTTGAATAAAATAAAACCTCAAGCTTTCCATTTATGTACGCTCTGCAGCCAAATGTGACAGCTCAGTTTCGGTCTCATATTGGTGAAGCTGCTGTATCAGCTGCAAAGGTGACATGCTTGATAATTCTACTGAATATCGTGCTCTGTGATTTTACAGATGAATTTCATTATTCCAGTTTCTGTTCATTATTGTTGTTTATATCTTGTGCACATGGTCACTTATTGGATTCTTTGCGTTGAAGGCAGTTGGTTACTACAGTGCTGGAACAGTGGAGTTTATCGTGGATACTCTTTCCGGAGAATTCTATTTCATGGAAATGAATACTCGGCTCCAGGTACTTTATTTCTGATGATGATCTAAGGTATTTGAATACGTTGCATTTTTTATATGCTGTGCGATCACATGCTGGGTCCATATTGTAAATGTTATCTGAACAATTGACTTTGAGCCTAGGTTTTTGTAAGCTCTACTTGAGATGGGGTTGTATTTTTTGATGCATGCGACTACCTGCCTGAACAAAAGAGATTCTCACCATGAGAAAAATTGCCTAACTTGTGAAACAAAAACTCTCCAAATCTTCAAGTACCAGAAATATAAATCAAGATCTGAAAACTAGCACATATATATATATTAGATTTTTTTTCTTTATCTGGATAGCCTGTTAACCGCATTAAGCTTCAGTACAAATTGGATGTGGTCATCTCAAATATTAAAATACTTTACATGGTGAATCGATATTTGAAGGTTGAACACCCAGTGACCGAGATGATCGTTGGCCAAGATCTTGTTGAGTGGCAAATACGAATTGCAAATGGAGAGTGCCTACCATTATCTCAGGAGCAGGTTCCGTTAAATGGTAATACTTCTTAGGGCAGTCATGATTCATCCAGATGTCTTTATAGATGATTTCTTAGTACCATGTTTTATCTCTTTGTCAGGGCATTGAATTCCTTTTGTTTGCTTTTTGAACAATAACATGGGTGATAAAAAATACTTCTCTTGGTACATGAACTGGTAGATTGGATGTCTAGATGAATGTCAGTTAGTTATTCTAATGTTCTTAGACAATATGGTTAACTATCAGTGTTCATTGATTCAGGACATGCGTTTGAAGCCCGAATATACGCAGAAAATGTGCCAAGGGGATTTCTTCCTGCTACAGGAACCTTACACCACTACAGGCCAGTTCCCTCTACCGCAACAGGTAAATTTAGGAGACACCCTGCAGCATAATTTATTACCAGCTATATATCAGTATGTCATTTGACGTATTCTTTATTAGTAAGAGTTGAAACTGGAGTTGAAGAAGGAGATACTGTCAGCATGCATTATGATCCCATGATAGCCAAACTTGTGGTTTGGGGTGAAAGTCGCAATGCTGCGCTAGTCAAGCTAAAGAACAGCCTGTCAAACTTTCAGGTATATAAACCCCCACATTTACTCAAATTTGATTGAATATGATGTAGTTTTCCTAATCATCGGGGGTGGTTTCTTGTCCTATGCCCTTGGTCCTGTGCCAACTTACTTCAACAAGCTTAGTTATTGGCTTTAGTAATTTTGTTTACCAACCATAGAAAACTCAATGGTATATGTTAAAAATTGGTGTACCTTTTTTTGTTGTTACTTATTAAATGCCCCCTACCTTGGAGATAATCAATTGTGAAGAAATGGTTTATTGAACTTCGAAATGAAGAATCTTTATCTGATCATTTTGATAGTTCACTGCTTGTCATATTGTGGTTAATGGATAAACAGATTGCAGGTTTGCCGACCAATGTTGGTTTCCTCCAAGAACTCGCAGGTCATAGTGCCTTTGAAAAAGGCCTAGTCGATACACATTTCATTGAACGCTATCAAAATGATCTTCTGAGTACTTCTACTCAAGCCTTGAGTGGATCACATGAAGCAGAAGAGCTTGGTGCAATTTTGGCTGCTGCCTGCATTTGCAAGAAGGATCATGTTTCCTCTGAAGTGTCACTTCGTATGTTATGTGGCTGTCCTTTAATTTTGTCATGCAACATTTTGCTCGTATGGACTGATAATGACATAATTTTGTTGGCAGATGATAAGAAACTTTCTATGTGGTACGCCCATCCACCTTTCAGGATGCATCATTTTGCCAAGCGTCTAATGGAATTTGAGTTGGATAGAGAACTTGGTGGATCAAGTGATGATCTTCTTAAACTGTCGGTAACATATAGATCTGACGGAACCTACGGAACCTACTTCGTTGAGGTGATCTCACACATCCCATATTAGCAGTTCCGATGAATATCCTTGGTTGGCATTGAACAATACACTATTGACTATCCTTGACCAGTTCATGAAGTCCTATTAATGGTGTTTGGACTTGTGACCAGACTGAAGATGGTTCTTCTCCTGGATTGGATGTCAAAGTAGATAGCAGAGGTGACCATGATTTCCGGGTTGATGTTGGTGGGCTGCAAACAGACGTAACTCTAGCATTTTATTCAAAGGTAAATTTGATACTTCACTATGGTGGTAGTGAGCATATTCATCAGTTACTTCTGACTGTAATACCCTCCTTAAATTTCTTTCCTCTGCTTCTTTCAGGACAATTGCAACCATATACACATCTGGCATGGGAAGCATCATCATCATTACAGGCAGACGTTGAGAGCTGAGCAGTCACCTGATGACAGTTCTCAACCTAGCGCTTCCTCTGAGGCGAGGTCACATCCAAAGGGGAGTGTTTTGGCACCAATGGCTGGTCTGGTTGTAAAGGTTTTGCTTAAAGACGGGGCACGGGTGGAGGAAGGTCAGCCTGTCATGGTTATGGAAGCAATGAAGATGGAGGTCTGAATGAATGAACTTGCTGGTGGCACTGGTAATTCATAAAAAAATTGAGAAAACTGTTAAAACTCACTATATTTTTCTCCTCTTTTCTCAGCATGTTGTGAAGGCGCCTTGTGCCGGATATGTGGAAGGGCTGAAGGCTACTGCCGGACAACAAGTTTTTGACTCTAGTGTCCTTTTCACCGTGAAGGTACGTCACAATTATTGATCATATCGTGGAATTTTTCAGTTTGCTCACCTTTGTTACAAGGAGGTATATGCTCAGTGCAAGTTTCACCATCATTAATCTTTTCCCAGCAGAAAACATTCTTGTTGAAAGATTTCCGAACACATTAGAAGATGATATGTTTATGGTTGCTTTTACGCCATTACTCGTCTGAACTCGAAAAAATTTCCCTTTTGCAGGAGAACAAGCCAAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037751