BGIOSGA037757

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Revision as of 08:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037757| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037757, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA037757

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037757, complete gene.

LocusTag

OS12G0606900

Ensembl Transcript ID

BGIOSGA037757-TA

Ensembl Protein ID

BGIOSGA037757-PA

Length

5490

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21190680..21196169

Sequence Coding Region

21190680..21191009,21191173..21191218,21191609..21191697,21191858..21192060,21192853..21192895
,21193361..21193437,21193519..21193548,21193635..21193730,21194056..21194158
,21194526..21194608,21194771..21194893,21195032..21195143,21195358..21195465
,21195573..21196169

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21190680..21196169 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21190680..21196169 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGATCGAGATCGACTGGGAGGAGGTGATGCCGACCACCACCACCGCCTCCTCCTCCCACGGCGACGATGTCGAGGTCCGCTTCGTCTCGACCTCCACGCGGTCGTCGGTGGCGCAGCGGCTGCGGCCGCGGGGGGCGAGGACGGAGGAGGAGGCGGAGATCGTGAGGATGAGGGACGACGAGCTGCGGAGGGAGATGGCGTTCGCGGGCCGCCTCCGGCCCCGGTTCGAGGGGATCCTCTGCGACGGCGGGGAGGGGAACCGCCGCCGCCGCGCGCTGCTCGAGGCCGAGGCGCGCCGCCGGGGGATCGGCCCTGCCGCCGCGAAGGATGGAGATGACCGTCACTCTACCTCACGCGATGTATTCAGTTTCGATATTGAAGATCAGCTTGGGGAAGATGCATCTCGCAGGTTCTGTGGTAAACCATGGCCCGTTTCTTCTACAAAGGAGAACTATGGTCAGCTAGGTATTGAAACACGGAGAAGTTCAAGGCAAATTGAACAGCGGAAACCCATTTCAGTGGATAAGATGTACTCGAGCAAACCATGTTCTTCAACTTTATCTGGGCACAAACTGAGAGTTCATGCCATTGATCCTGATGAGAAAGCTGATGATGAAAAATCTGAACCAAGTACAAGATACTCTTTCAGAAATTATATTAAGAAGAGGAAGGAAAAACATCAGTCGTGTCTCTCTGATTTTCAAAAGGTTCAAGACGTAGTTCTCTTGGATGATGAAGATGTTCAGCCTGAGGGTCAAGTAGACTGTAGGATGCATGACAGAAGGAACGAGACCATGATTTACTACCCATCAAGAGATGATCCAGAAGCTGTAGAGCTTAGCAGCTCAGATATTAAATGTCTTGATCCTGGGGTATATTTATCATCACCAGTGATAAACTTCTACATTCAGTACATGAAGAGGACCAAACTGCATGATGATGATTGCAGAGAAAAATTCTACATATTTAACACATATTTCTATAGCAAGCTTGAAGAGGCTTTATTGGGGAAGGGTGAGTTTCTGAAATTGAGAAGATGGTGGAAAGGTGTCAATATATATCACACATCATACATCATCTTGCCAATCCATGGAACGGCACACTGGAGCTTGATTATCATCTGCTTTCCTTCCAAAGAAAGTAATTCAGGGCCGATCATACTTCATCTGGACTCCCTTGAGCTGCATTCGAGTGCTAAGATTTTTGACACCGTTAGGAGATACCTTGAAGCAGAATGGTGCCATTTACGGAAGAATCCCCCTCCCGATATTTCAATTTCAGAGACAATATGGGATGATCTTCCAAGCAATATACAGAAAGAAAAAGTTCAGGTTCCACAGCAGAAGAATGAGTATGACTGTGGTATCTTCATGCTTTATTATATTGAACGGTTTATAAGGCTAGCACCAGAAAGATTCACTCGAGATAATCTTAGCATGTTTAGTCGTAGTTGGTTCCAGCCTGAAGATGCTTCTGATCTAAGACAGAGAATACGAGAACTGCTGTTGGAAGAATTTGAAAGTGCCAGGCTGGATGAAGCTTTGTCGGAGGCTGACACATCTGACCGATCCGATAATGAAGAAGATGCCACAAAGAGCGCAGAATCAGAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCTGGCAATGGTAGTTCAGAAATGATCGTAGAGGGTGGAGACACTGGCATAAGTAATGAAGACATCAAGGGGGTCGCGGCATCAAAAGAAGCAAGCTCTAGCATCTGCAGAAGCGCTGACAATCTCGCGGGCTGTGTTCTTTTGGAAGAAGCTACATTGTCGGATAGCGTGATGAAGGATGAAGAAGACACTACAAAAGCAGATCCTGTTAGCTCACAAGATGAACAAGAAGTTGCAGTTTTATCCCCTGGTGCATGGAAAAACAGTGAAGAGAACACACATAAACAGCCACAGCCAGATATATGTTGCGACAGCTCCGACAGTGAGATGGACGATGTGAAGATCATTGAAGATCCATATCAAAGAACTAACAAGCAAAATTGTCGCATCTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MPIEIDWEEVMPTTTTASSSHGDDVEVRFVSTSTRSSVAQRLRPRGARTEEEAEIVRMRDDELRREMAFAGRLRPRFEGILCDGGEGNRRRRALLEAEARRRGIGPAAAKDGDDRHSTSRDVFSFDIEDQLGEDASRRFCGKPWPVSSTKENYGQLGIETRRSSRQIEQRKPISVDKMYSSKPCSSTLSGHKLRVHAIDPDEKADDEKSEPSTRYSFRNYIKKRKEKHQSCLSDFQKVQDVVLLDDEDVQPEGQVDCRMHDRRNETMIYYPSRDDPEAVELSSSDIKCLDPGVYLSSPVINFYIQYMKRTKLHDDDCREKFYIFNTYFYSKLEEALLGKGEFLKLRRWWKGVNIYHTSYIILPIHGTAHWSLIIICFPSKESNSGPIILHLDSLELHSSAKIFDTVRRYLEAEWCHLRKNPPPDISISETIWDDLPSNIQKEKVQVPQQKNEYDCGIFMLYYIERFIRLAPERFTRDNLSMFSRSWFQPEDASDLRQRIRELLLEEFESARLDEALSEADTSDRSDNEEDATKSAESEQAAAAAAAAAPGNGSSEMIVEGGDTGISNEDIKGVAASKEASSSICRSADNLAGCVLLEEATLSDSVMKDEEDTTKADPVSSQDEQEVAVLSPGAWKNSEENTHKQPQPDICCDSSDSEMDDVKIIEDPYQRTNKQNCRIF</aaseq>

Gene Sequence

<dnaseqindica>1..330#494..539#930..1018#1179..1381#2174..2216#2682..2758#2840..2869#2956..3051#3377..3479#3847..3929#4092..4214#4353..4464#4679..4786#4894..5490#ATGCCGATCGAGATCGACTGGGAGGAGGTGATGCCGACCACCACCACCGCCTCCTCCTCCCACGGCGACGATGTCGAGGTCCGCTTCGTCTCGACCTCCACGCGGTCGTCGGTGGCGCAGCGGCTGCGGCCGCGGGGGGCGAGGACGGAGGAGGAGGCGGAGATCGTGAGGATGAGGGACGACGAGCTGCGGAGGGAGATGGCGTTCGCGGGCCGCCTCCGGCCCCGGTTCGAGGGGATCCTCTGCGACGGCGGGGAGGGGAACCGCCGCCGCCGCGCGCTGCTCGAGGCCGAGGCGCGCCGCCGGGGGATCGGCCCTGCCGCCGCGAAGGTATTCTGCTCGTGTGTGATCGGATTGGACTGGGTTGTAGCTGCAGCTTCGTTCCCCCATGAGATTGGAGTGTTTGATCATCCATTTGTGGAGCAATTAGTGTGCATTTCTGGCTTATGTTTGTTGGTTAGTCCACTAACCAGTGTCCTTATTATTATTTCAGGATGGAGATGACCGTCACTCTACCTCACGCGATGTATTCAGTTTCGGTATGATCTTCGCATTCAGTGTCGGTGCTGTTTTTTCTAGGCTTATACCACAACGCCAACAGAATGATTAGGAGTTTTTTTTTTTGTTCATCTGCTGTATTAGTGAATTCCTGTGGAAAACACATTCGGTTAGTCTGACGAGTAGGGGGGTGGGGTGGGGGAGCCTTTACTATTAAACTATATACATTGTCAAGGAATATAGATTATAGTATTTGGGAAAACTTATCACCATATGGTAAAAGATACCTTGGTTGGCTTTTTAGGGATAATAGACATGGCAATGGGAGATCATTTGCTGTTGCCTTTTTATATTCTGTTTCATCAAGACAAAAGGTACATCCTGATGATCTACCATTGACACAATATTTATATGCCTCGGTGTGTTTGCAGATATTGAAGATCAGCTTGGGGAAGATGCATCTCGCAGGTTCTGTGGTAAACCATGGCCCGTTTCTTCTACAAAGGAGAACTATGGTCAGGTATACAGTAATGTGATGACGTCATTTGGCTTTCTTCTTTCTCTTTTTTTCTTCTTTTTTTTGGGGGGTGTGGGGGGGGGGGGTGCGTGCGCGGGTAGGTGAGGGGTTTCTTTTGATATTCCATAGTAACCAGGATGAGATATGTTTTCTTTCAATGCAGCTAGGTATTGAAACACGGAGAAGTTCAAGGCAAATTGAACAGCGGAAACCCATTTCAGTGGATAAGATGTACTCGAGCAAACCATGTTCTTCAACTTTATCTGGGCACAAACTGAGAGTTCATGCCATTGATCCTGATGAGAAAGCTGATGATGAAAAATCTGAACCAAGTACAAGATACTCTTTCAGAAATTATATTAAGAAGTATGTATCAATAACTGTTAAGCTGTTTAGAACGCTTGTTCTATGTATTCCTTGTTCAACCTGAGCTGTTACTGAATTTCAATAATTTTGCCTTAACATTATGTGTAAGTAACTAACTTTTTTAAGCATGCTTGATGTTCCATGATGACACCGTGCTATTATTAGAGAAATTCCTAGTTACTTCTGTAGTTCTGTTGAATCGCAGATATATAAGTGATGTTTACTACTGCATCTTTTTTTGAAATTCCTATTAGTAAGGAAATATTTTTGTAACATTGTGAATTTTCTATGATGGGTTCATTCTGTTCTGTAGTATTGCAATACTTGTTATTGTTCATGAAATTTCGAAGATAGAGATATCAAGAACCTTTAATCCTTCCAACGAGAAATGTAACGAAACCTTTGTATCTTTGATTGATCTAGAGTTCATACATGCACAGTTATGTGTCCAGCAAGGTCATGCTTCTGGAGCACTCTCATTATTAACAATTCCATCTCTTATGCTTCTTTAGTCCAGTATAGGCGTATTTTACTTTTTTGGTCTTACATTATGGGTAGGAGTATTTTTGGAATCACTACTCACTACTTTGTTACTCTGATTCGGGCATCGCTTAATGGAAACATACCATTGAGTCGATAGGTAGGAATCTAATTTCTGGTGGGACTCTAGTGTGAGAAGTATCACCTAGTACCTCACATCTCTTTTCATGTATCAGTTTGATGCATTGATATGTTAATTGTGTATTATTTTGTTCAATCAACGAAAAATTCCTCTTCAATTCTTCTTTGCAGGAGGAAGGAAAAACATCAGTCGTGTCTCTCTGATTTTCAAAAGGTGGGTACGCTGATAAGTGATAAAGCATCTATCCCAAGATGAACCTATTCTTTTCTGTAGTATCTTCTTCCATACAAACTATCATATTTCCCTACTGATCTATTGAATGCTCAAAGCACTGTCTATTTCATTTTGGATCAATAGCTAAAAGTGAGAATTAAACAAGCTGCATGTATATGCATTTCTTTTCCATGCTGTACATAACTGAGGATATTATGTTTGCCAGACTTCACGAACTCTATGATGACTGAGTGGGTGGTGATGTCTTTGGTTTGTTGTTGCGATATGCTTTCATTTAATAGTTTGCCCATTCCAGTAAATTCTTTGCTTAGAAATTTGGCCATCATACATTGTATGAGTGAAAATCATTATATTCCCTCAGTATTATTATGTATGGCACATTAGTGGTGATCCTAATACCACATGCAAGTTTCACTATTCAAATTAAAATGTTTGACCTATCAGGTTCAAGACGTAGTTCTCTTGGATGATGAAGATGTTCAGCCTGAGGGTCAAGTAGACTGTAGGATGCATGACAGAAGGTAAGCTTCTCGAGAAAATTGTGTTGTTGTGTACTTCAAGCCACAATATTGATTTATGTAACATAACAAATGTGTTTTCAGGAACGAGACCATGATTTACTACCCATCAAGGTGAACATTTTCCATTCTTTCTGAAAGTTTTGATTTCATGGAAGTGTTTTTTTTCCTTATGTTGTTAATGTTATTTATATGAACAGAGATGATCCAGAAGCTGTAGAGCTTAGCAGCTCAGATATTAAATGTCTTGATCCTGGGGTATATTTATCATCACCAGTGATAAACTTCTACATTCAGTAAGAATGCACCTTGTTATCTTTTAAGTTTGAGCTTTTAACCATTCTAATATCTAAAATATTCTTTGGAGACTACTTGAGTGTAATCTTTTTCTTCCTTTAAAAAGAAATAATTGGTGCAGGATTTGTTTTGATGCTAGTTTTTCTGCCATTTGACATTTAAATATATAAAACAAAGTCAAGATATTTAAAATGATATGCATTCCTGATCAATCTAGTTGCACAAAAAATATGAATACCTCATAAAGTTAGGACTCCTGAATTTGGATTATATCTCATTTTATAAATATTGTTAGTTTACTCTTTCTACATAATGTTATGGCAGGTACATGAAGAGGACCAAACTGCATGATGATGATTGCAGAGAAAAATTCTACATATTTAACACATATTTCTATAGCAAGCTTGAAGAGGCTTTATTGGGGAAGGTACTATTGTGTGCAATGAACACTATGTTTTCTGCCGACTGTGTTTCTTTTCTTGACGCAAAAAGAGAAGGTTAACTCTATTGTCGTGGTTGCCATGAGTGTGGAGTACAAACCTTAATCACTCTCTCCATAAAAAGCAGTATGAAGAATACCACTTCTGTTTTGTAGTAGTGCTAACATTGCTAGTACCCTGATTCTATTGCTGTTTGTTGATCTCTTCTGTTATATCTGCTGTTATATACCTTTTATGATGCTTTATCTCATTTTGCTTCTCAGTGTTGTATTATCTTCACATGATAATGTTGGACTGAAATATTGTATATAGCTCATCTCACATAGAGACGTTTTAATTGGTTGCTTGTTCTAGGGTGAGTTTCTGAAATTGAGAAGATGGTGGAAAGGTGTCAATATATATCACACATCATACATCATCTTGCCAATCCATGGAACGTAAGTTGCTATTCATACGGATAATAATTCAAACATTTTCTTGAAATATTCACACCAACATTGTATGTTACTGCTAGTGTGCCTTTAATGCCATACCTTGTGTAATTGTTTACAGTAGGTTTCAATTTATGATGAGTTTGCCTATCTGCATTCCTAAATCAGGGCACACTGGAGCTTGATTATCATCTGCTTTCCTTCCAAAGAAAGTAATTCAGGGCCGATCATACTTCATCTGGACTCCCTTGAGCTGCATTCGAGTGCTAAGATTTTTGACACCGTTAGGAGGTGAGTGGCTGATCTCCTATTCATAATTGATCATGTTAAAAGTTGTTTTCTGCCACTATTTTGTGGATAACTTAACCTTATACTGAGTTCTAGCGCAAGTGACCTCTTTTCTGATGTTGGCAACTATACATGTTATAGATACCTTGAAGCAGAATGGTGCCATTTACGGAAGAATCCCCCTCCCGATATTTCAATTTCAGAGACAATATGGGATGATCTTCCAAGCAATATACAGAAAGAAAAAGTTCAGGTAAACCTTTGTTAGACATGTGATGTACATATCAATAGTATTAATCAATTAACATTCTATTAGAAGGTTATGGTACAATTTTGTTGTGCTTGTTTGACTGCATGCATATTGAATATTTGTGTTGAATAATTGTTCAGATTACAGTAATGCTGCAATAAACACTTAGATGTTTTTGCGCTTAATTCAATTTGTACACAATTTTCACACCTGCCAGGTTCCACAGCAGAAGAATGAGTATGACTGTGGTATCTTCATGCTTTATTATATTGAACGGTTTATAAGGCTAGCACCAGAAAGATTCACTCGAGATAATCTTAGCATGGTTAGTGGCCCTGTCATTTTTCTGTACTTGTTTCTTGTAGAACTTCATCTGTTTAGATCTCAGTGTGTTTTCGAAATTTTAACACTGCGGTTGTAATTGTTATACAGTTTAGTCGTAGTTGGTTCCAGCCTGAAGATGCTTCTGATCTAAGACAGAGAATACGAGAACTGCTGTTGGAAGAATTTGAAAGTGCCAGGCTGGATGAAGCTTTGTCGGAGGCTGACACATCTGACCGATCCGATAATGAAGAAGATGCCACAAAGAGCGCAGAATCAGAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCTGGCAATGGTAGTTCAGAAATGATCGTAGAGGGTGGAGACACTGGCATAAGTAATGAAGACATCAAGGGGGTCGCGGCATCAAAAGAAGCAAGCTCTAGCATCTGCAGAAGCGCTGACAATCTCGCGGGCTGTGTTCTTTTGGAAGAAGCTACATTGTCGGATAGCGTGATGAAGGATGAAGAAGACACTACAAAAGCAGATCCTGTTAGCTCACAAGATGAACAAGAAGTTGCAGTTTTATCCCCTGGTGCATGGAAAAACAGTGAAGAGAACACACATAAACAGCCACAGCCAGATATATGTTGCGACAGCTCCGACAGTGAGATGGACGATGTGAAGATCATTGAAGATCCATATCAAAGAACTAACAAGCAAAATTGTCGCATCTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037757