BGIOSGA037759

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Revision as of 08:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037759| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037759, complete gene.| tag = OsI_390...")
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Gene Name

BGIOSGA037759

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037759, complete gene.

LocusTag

OsI_39040

Ensembl Transcript ID

BGIOSGA037759-TA

Ensembl Protein ID

BGIOSGA037759-PA

Length

3208

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21206727..21209934

Sequence Coding Region

21206727..21206814,21207325..21207386,21207809..21207921,21208186..21208288,21208673..21208900
,21208981..21209199,21209292..21209552,21209632..21209934

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21206727..21209934 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21206727..21209934 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGGACTTAAGCAAGCTTGACGTGACAAAGCTCCACCCGTTATCGCCTGAAGTTATCTCACGCCAGGCGACGATCAATATAGGTACCATTGGGCATGTGGCCCATGGAAAGTCCACCGTTGTGAAAGCTATATCTGGAGTTCAGACTGTTCGCTTCAAGAATGAGCTGGAGCGTAACATCACTATAAAGCTTGGTTATGCTAATGCGAAAATCTACAAATGTGAAGACGAGAAATGCCCACGACCAATGTGCTACAAGGCTTATGGAAGTGGAAAAGAAGATAGCCCTCACTGTGATGTGCCTGGGTTTGAAAACACTAGGATGAAGCTACTGAGACATGTTTCTTTTGTTGATTGTCCGGGGCATGACATTCTCATGGCTACAATGCTTAATGGAGCTGCTATCATGGATGGAGCATTGCTTTTGATAGCAGCCAATGAAAGCTGCCCACAACCCCAAACATCTGAGCATCTTGCTGCGGTTGAAATCATGCGTCTCCAACATATCATTATTCTTCAGAACAAGATTGATCTTATCCAGGAAAGTGCAGCAATGAATCAACATGAAGCGATCCAGAAATTCATCCAGGGTACCATAGCTGAAGGTGCTCCGGTGGTGCCAATATCTGCTCAGCTTAAGTATAACATTGATGTGATATGTGAATACATTGTGAAGAAAATCCCCATTCCTGAAAGGAACTTCACTTCCCCTCCAAACATGATTGTCATTCGCTCCTTTGATGTCAACAAGCCTGGTTCAGAGGTTGATGAAATTAGGGGTGGTGTAGCTGGTGGCAGCATCCTCAGAGGAGTTTTGAGGGTGAACCAGAACATTGAAGTCCGCCCTGGCATTGTAATGAAGGATGAAAGCGGCAACATCAAATGCACCCCAATCTATTCAAGGATTGTTTCGCTCTATGCTGAGCAGAATGAGCTCCAATTTGCTGTGCCTGGAGGTCTTATTGGTGTGGGAACAACCATGGATCCAACCTTGACACGTGCTGATAGACTGGTTGGTCAGGTTCTAGGTGAAGTTGGATCACTTCCTGATGTCTATGTGGAGCTTGAGATCAACTTCTTCCTTCTTCGGAGGCTGTTGGGTGTGAGGACAAAAGGTACTGAGAAGGCTGGGAAGGTCTCCAAGCTCACCAAGGGTGAAATCCTCATGCTTAACATCGGATCCATGTCGACTGGTGCTCGTGTGGTTGCTGTCAAGAACGATCTTGCCAAACTTCAGCTCACTGCCCCTGTCTGCACAAGCAAAGGTGAGAAGGTTGCCCTTAGCCGTCGTGTTGAGAAGCATTGGCGACTCATCGGATGGGGCCAGATCCAGGCTGGCACGACGCTCGAAGTTCCACCGTGTCCGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKIDLIQESAAMNQHEAIQKFIQGTIAEGAPVVPISAQLKYNIDVICEYIVKKIPIPERNFTSPPNMIVIRSFDVNKPGSEVDEIRGGVAGGSILRGVLRVNQNIEVRPGIVMKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVYVELEINFFLLRRLLGVRTKGTEKAGKVSKLTKGEILMLNIGSMSTGARVVAVKNDLAKLQLTAPVCTSKGEKVALSRRVEKHWRLIGWGQIQAGTTLEVPPCPL</aaseq>

Gene Sequence

<dnaseqindica>1..88#599..660#1083..1195#1460..1562#1947..2174#2255..2473#2566..2826#2906..3208#ATGGAGCAGGACTTAAGCAAGCTTGACGTGACAAAGCTCCACCCGTTATCGCCTGAAGTTATCTCACGCCAGGCGACGATCAATATAGGTATTGATGCAATCCTTTTAGCGATGTTTTACTGTTCTACGAGTATTGCATAGCTTGTCACTGCAGTTTTTTTTCTGTGTTTCCTGTCTACAAAGTGAATATCATAGTTCTGTAAGATGTTTAGGTTTCCTTCATTAGCATTTAGCTGTGTTATAGTTTGCTCCTTTAGATGCTGGAAACTTGGGAACTATTTCCTTTCTAGGGATGTGCCTGTTTATGACCACTATAATAATACTGAAGTCTGAAGTCTCTCACTTAAGACATGGGTACACTGTTGCTGTTTGTACTTGTTGACTAGTTTGTTATGATTCATTTTTGTCCAGATATTGTGCATGGCAGGAAGTACTCTGTTTTTTTAATTTTTTTTATGACTATGCAATTTATATCTAATGGAGATGCATGTCTCTGGTTTTGTGTTGACTAGGGACATTGCAATGTTATGTTATTTGTCTTCTGATTTTGTGAGCCTCCTGCATGGGCATGATATTCTTTGTTGTTTTGTAACATCAGGTACCATTGGGCATGTGGCCCATGGAAAGTCCACCGTTGTGAAAGCTATATCTGGAGTTCAGGTATAATTCATATATTTCATTATTGCACTTCTTTCCAAGTGATGAATCTAGACTCTGTGTATACCTGAGAATTATATCTCACGTTTATCAGTAACTTTTCCTTATCTTTCTGCCACTTGATTCTTGATGTGCACTATTCTACATTCTTGAGTAAATTACAGTGAACTTTAAAATGTGTGCTGAAAATCACTATAGAGTTTAGATTTCAGAAGAGTTGTATCTGGGAATTCATATAATATAATAGCGCGTAGAAGGATATGTGTTGGCACTCCTTATAAAGGCGGTACAGTTGTAGTTCAAGCTAGACTGGATTTAAATGATGGTTGTTGAACTGCTCAATCGTTTTTAGTATGTATGTACTTCATATGCAATCTGTTTATTTGTTTTATATAGTTCTGATTTCTTCCTTGTGATTTGTACAGACTGTTCGCTTCAAGAATGAGCTGGAGCGTAACATCACTATAAAGCTTGGTTATGCTAATGCGAAAATCTACAAATGTGAAGACGAGAAATGCCCACGACCAATGTGCTACAAGTATGCAATAAACCACTAAATGGCATGATTTGTTCTATGCAATGAACTTCCATTTGTATTACCATGTTAAAAACACTTATCTATATAAAATTAGTTTTCCAGTTAATATCTGGTAGAAGTTATGATTAAAATCTCATGATTGATTCTCCAGAAAAGTAACTTATAATTATCTGCCATTCACCTACTTAGGACTGCTGCTTTGATGTCAAGCTAATGCATGTGAGCTCTGCACTATATGTTGACTTTTTTTCCTGTTATATAAAGGGCTTATGGAAGTGGAAAAGAAGATAGCCCTCACTGTGATGTGCCTGGGTTTGAAAACACTAGGATGAAGCTACTGAGACATGTTTCTTTTGTTGATTGTCCGGTATGATATAAACCTCTTACCCTTTGTTGCATATATGAATGTTCTTTTTCTCAAGACATTTCTCTGAGCATTTATTGTCTTCCTGAATGTTTCATGATATTACTTTATGTGGCTTTTCACTAGCCTGTATATTTGTTTTAAAACATTTTGTTCCGTCAATTATGATCATGGGGTTTCACTTGCATTGGTTTTTATATGCAAATATTTTTTCCACTAGAAGGCACATGGCCATACAGGAGTGAAGGATGTAGATAAGAAGTATAAACTGATGTCATCTCAAATATTTTTATGGGTCACTGCATATTGTTTTTTATTTTTTGATCTCTCGAAGTCAATAATGAGAAAATATTACATATGTAATACATACCTATTTCTTCTTAACAGGGGCATGACATTCTCATGGCTACAATGCTTAATGGAGCTGCTATCATGGATGGAGCATTGCTTTTGATAGCAGCCAATGAAAGCTGCCCACAACCCCAAACATCTGAGCATCTTGCTGCGGTTGAAATCATGCGTCTCCAACATATCATTATTCTTCAGAACAAGATTGATCTTATCCAGGAAAGTGCAGCAATGAATCAACATGAAGCGATCCAGAAATTCATCCAGGTTGCTACTGTCCATTATTATCTTGTAGATGGGTACATCTGTCTGTCTATTTGTTTATGGGTTATTTTATTTCTCTATAGGGTACCATAGCTGAAGGTGCTCCGGTGGTGCCAATATCTGCTCAGCTTAAGTATAACATTGATGTGATATGTGAATACATTGTGAAGAAAATCCCCATTCCTGAAAGGAACTTCACTTCCCCTCCAAACATGATTGTCATTCGCTCCTTTGATGTCAACAAGCCTGGTTCAGAGGTTGATGAAATTAGGGGTGGTGTAGCTGGTGGCAGCATCCTCAGAGTATGTATTCCCTCGTGTGTCATGTAATTAGATTTTTTATCACTACTTTTGGGTTATTAGGTATGACTTAAATTGTGATGCTTCTTTTATAGGGAGTTTTGAGGGTGAACCAGAACATTGAAGTCCGCCCTGGCATTGTAATGAAGGATGAAAGCGGCAACATCAAATGCACCCCAATCTATTCAAGGATTGTTTCGCTCTATGCTGAGCAGAATGAGCTCCAATTTGCTGTGCCTGGAGGTCTTATTGGTGTGGGAACAACCATGGATCCAACCTTGACACGTGCTGATAGACTGGTTGGTCAGGTTCTAGGTGAAGTTGGATCACTTCCTGATGTCTATGTGGAGCTTGAGGTTTGTCAACTCTTCGTTGCATCAAGATTTAGTGAGAATAAAACATTCATTGCTTAAATCTGGACTTTCATGCATGCAGATCAACTTCTTCCTTCTTCGGAGGCTGTTGGGTGTGAGGACAAAAGGTACTGAGAAGGCTGGGAAGGTCTCCAAGCTCACCAAGGGTGAAATCCTCATGCTTAACATCGGATCCATGTCGACTGGTGCTCGTGTGGTTGCTGTCAAGAACGATCTTGCCAAACTTCAGCTCACTGCCCCTGTCTGCACAAGCAAAGGTGAGAAGGTTGCCCTTAGCCGTCGTGTTGAGAAGCATTGGCGACTCATCGGATGGGGCCAGATCCAGGCTGGCACGACGCTCGAAGTTCCACCGTGTCCGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037759