BGIOSGA037780

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Revision as of 08:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037780| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037780, complete gene.| tag = P0702G0...")
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Gene Name

BGIOSGA037780

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037780, complete gene.

LocusTag

P0702G08.10

Ensembl Transcript ID

BGIOSGA037780-TA

Ensembl Protein ID

BGIOSGA037780-PA

Length

5890

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21501042..21506931

Sequence Coding Region

21501042..21501242,21504252..21504560,21504654..21505087,21505647..21506407,21506483..21506931

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21501042..21506931 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21501042..21506931 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGTTGGTCTGCTCGCTGCCCCCCCCCCCCCCCCTAGGTCCTTGCCGACTGCGCCGCCAGGAGCTGCACCGCCCTCGCCGCCCGAACCACGTCCCTGGCGCTGTCTCCCACTCCGCCCTCGACGCCGCCTGGTGCGCCGCCGGAAGATGCGTACAGAGGAGGGTGGAGAGCTCAAGGGTTTTGGCACAGGTGAAACGATGGCTGGAGGCCGCGCCTATTGGGATAAAGCCCTTACAAAGATATTCCTCGACTTATGCATTGCTGAGAAGATAAAGCTCAACTACAACAAGAAGGGTCTTACCAACATAGGTTGGCAGAACTTATATCGCAATTTCAGAGAACAAACAGGCAAGAACTATGATAGCAAACAGCTTCAGAACAAATTTAGCACCTTGAAGAGACAGTACAAGCTATGGATGAGCCTAAAGAATAAGAGTGGAGGTGGGTGGGACAACAGTTCTGGCACCATAAGGTGCGATGATGACTGGTGGGAAGACCGTATCGAGGAGAATAGGGATGCCAGACAGTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTAACTACTCTTTTTGGCTGCATGGACACGGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCGAGAGAACACCCAGCGGTGGAAGCGATGACAACTTTACTCCGATGCCAAACGACAATGTCGGCCGGTCTAGTGAGGGCCGTGTGGCTCAAAGGGCAGGGAAGGAGCAGGTGGTTGATAGCCCACCACCCAAGAAGAATAAGAATATGGAGTACTATGTAGGGCGCATATCAGAGAGTATGCTTGAAAGGAGTAGGAATGAAAGCAGTGTGATCAGGGGAGAGCAAGATGAGATGAAAGAATTGCTGCACCTTGTAGAAGAGGATGGTGTGGCTCAAGGATCCGAGTTGTATTTCATAGCTACTGACCTATTTAGAATGTCTACCTCTGAAACTTCGAGCAGCACAAGCTCCTCGGCTGCACATTTGGATGATGGGTGGTCTACCTGGTGGGACATGGGTGCAGCTGTCGGTGTGCTAGCAGCAGTAGCATCAGCAAGATCAAGTGGTTGCGGAGTGAAAGATGCCACCTTGCCCTTCAAGGAGGTGACGGGTCGTCAATGGGTAGATCTGAATCTTGCTGACAGTAACAAGTGCTACAGAAATTTCCGTCTCCGGCCTACTGCATTCCATTTGTTGCATACAACATTGGTTGCAAAACACGGTCTAAAATCCTCCCGTCATTGTGAGTCGATTGAAGCCTTAGGGATGTTCTTATGGGCTTGTGGCACAAGACAATGTCAAAGACAGATGTCAGATCGATTTGGTCGGTCATTGGACACCGTAAGTAGGAAGTTTGACGAAGTCTTAGATGCCATGTTATCTTTTGCACGGAGGATTATTAGGCCAAGGGACCCAAGCTTTAGATATGTGCATCCTAACCTGCACCAGTTCTCACCATACTTTGATGGGTGTATTGGAGCTATAGATGGAACCTACATTCCAGTCACAGTCCTTGATCCGACTCATGATGATTTCATTAACAGGAAGGGGTTCACCAGCCAAAACGTGTTGGCTATATGCGACATGGGCATGCGGTTTACATTTGTCGCTACGGGTAAGAGGGGGGCTGCGCATGACATGGCTGTTTTCAGGGAGGCAGTGAACACTGCTGACCATTTCCCTCACCCACCCCCAGGCAAGTACTATCTAGTGGATTCTGGTTACCCACTACGCGAGGGTTACATGGCCCCATATCGCAAGACTAGGTACCATTTGAAGCAATTTAATGGCAAAGGTCCTGAAAATCTGTGCGAGATTTTTAACTACCACCATTCTTGTCTACGGAACGTGGTTGAACGCTCATTTGGGGTTTTAAAGAATAAGTGGAAGATTCTAAAGGGGATACCATTGTATCCTATGGAGAAGCAATCAAAGATTATTGTCGCATGCTTCGCGCTGCATAATTTCGCGATGGACAACAACGAACCCGAGATGGACGGAGACAATGTGTTTGGGCAGTACCAGTACCTTCGCACGCCTGGTCAACCAATTGGCCCGTTGCAAGATTGGTTAGCAGCTACTGCCGATGATGATATTGGCACTGTCCGTGATTGGATTGCAGCTGGACTATATGGTTTGGCATGA</cdnaseq>

Protein Sequence

<aaseq>MGVGLLAAPPPPPRSLPTAPPGAAPPSPPEPRPWRCLPLRPRRRLVRRRKMRTEEGGELKGFGTGETMAGGRAYWDKALTKIFLDLCIAEKIKLNYNKKGLTNIGWQNLYRNFREQTGKNYDSKQLQNKFSTLKRQYKLWMSLKNKSGGGWDNSSGTIRCDDDWWEDRIEENRDARQFRGKPLEHEDELTTLFGCMDTEEGTMLCVGGIGERTPSGGSDDNFTPMPNDNVGRSSEGRVAQRAGKEQVVDSPPPKKNKNMEYYVGRISESMLERSRNESSVIRGEQDEMKELLHLVEEDGVAQGSELYFIATDLFRMSTSETSSSTSSSAAHLDDGWSTWWDMGAAVGVLAAVASARSSGCGVKDATLPFKEVTGRQWVDLNLADSNKCYRNFRLRPTAFHLLHTTLVAKHGLKSSRHCESIEALGMFLWACGTRQCQRQMSDRFGRSLDTVSRKFDEVLDAMLSFARRIIRPRDPSFRYVHPNLHQFSPYFDGCIGAIDGTYIPVTVLDPTHDDFINRKGFTSQNVLAICDMGMRFTFVATGKRGAAHDMAVFREAVNTADHFPHPPPGKYYLVDSGYPLREGYMAPYRKTRYHLKQFNGKGPENLCEIFNYHHSCLRNVVERSFGVLKNKWKILKGIPLYPMEKQSKIIVACFALHNFAMDNNEPEMDGDNVFGQYQYLRTPGQPIGPLQDWLAATADDDIGTVRDWIAAGLYGLA</aaseq>

Gene Sequence

<dnaseqindica>1..201#3211..3519#3613..4046#4606..5366#5442..5890#ATGGGTGTTGGTCTGCTCGCTGCCCCCCCCCCCCCCCCTAGGTCCTTGCCGACTGCGCCGCCAGGAGCTGCACCGCCCTCGCCGCCCGAACCACGTCCCTGGCGCTGTCTCCCACTCCGCCCTCGACGCCGCCTGGTGCGCCGCCGGAAGATGCGTACAGAGGAGGGTGGAGAGCTCAAGGGTTTTGGCACAGGTGAAACGGTGAGAAGAGAGGGGAAAAAAAAAACGAGTCGCGCGGTACCTGGGCCGCCCCCATCCGGCCATCTCAAGGGAATATCCTAAGAGCAAATTCAATAGTATAGCCAACTACTATCTCCAATTTATCTAATTTATCTATAGTCAATCTAATAATTCATTCATACAATAATTATATACTACACTATTAATACATGGTCCCACCTGTCATACATACACTGTGTCTTGGAGTCCGTGCTACAGCTGGCTACAAATATGTAGCCCGCTGCCCTTCTCTCTTTTCATTTATCTCCTTAAATATGTTTGCAGCTGGCTTATAGCCTGCTATTGTACCTGCTCTAAGGCTCCATTTGAGTTCCCAACTCCTTCTCGTTTTCCACGCGCACGCTTTTCAAACTGCTAAACGGTGGGTTTTTTTGCAAAAAGTTTCTATACGAAAGTTGCTTAAAAAAATCATATTAATCTATTTTTGAAAAAAAAATAGCTAAAACTTAATTAATCACGCACTAAAACGCTGTTTCGTTTTGTGTGTCGGGGAGTGAGGGTTCCTAACCCTCGCTACCGAACAGAGCCTAAGTGGTAGCCATATCATCCAAACACCTTAAAATTTTGGGCGGCCATATTTAAGGGTGGAAAAGCTAGAGCTTGGGAGCTCAGCTTGGGCTTGGCTAACTAAGCTCGAGCCAAGCCCAAGCCTGAAATGAGCCGAGCCGAGCTGACTCGCGAGCAGTTTGTTTTTGGCTCGTAAACCTAGGCCATCATGTGTGTTTATATCGTTATATAGGAGAGGAGAGAGAAGTGAGGAAAGAGAAACAAACGGGCGCGACAAATGTATCGCCGGGTGCTAACGCTTCTTTCAACGCGGGGGAGCTGTTTAGCGATTAAAAACAATTTTTGTGGGTCCACTGACGTGCCCATCGGATCTTATGTGGTTTTCCTCTTCAGCGCGGCCCATCTAGTTGCATCTTTGTCGCCTCGTCTTCGTCTTCCCCCAACCAAATATCCTCCTAACATTTTATAGACGCCGGCGGTTGTACGTCCCGCTGCCGGGCGCCCGCAGATGGATCTGCAAATTGCGCAGCTGCAAATGAAGTTCGAATTGGCCGAGCGAGACCTGTCGAGTGTCGCGAGCAGGGGGTTCTGCGGAAGCAAAAGCTCAATCACCATCGTTGAGCGCGTGGTGAGCACCGTTCGCTCGCTCTCCTGGTCTAATCACCGACGAGAGCATGCGATATGCTATGCAGCTTTGTTTAATTTGAGTTGTTTTCTTTTAAAAACTAATTTGAGTTTGTCATCGTCTAATCTATTCGACTCTTGTTCTCTTTTTCCCTTTTTCCCTTTTTCTTGTTCTCCTCTGTTGAAATGCCTTCATGGTGATGCGGGTGGCCGACATGCTGGCAATGAGTTGCTAAGGCCCGTGAATGTCGTGACTCGTTAATTTAGCACAGACACGGCCACAGGAATTGACTTCAGCTTGGATCATGTACATTAATATATGTACAGAATTAATTATTGATTAGTGATATATGATCAACACAGGAGCTACTCTATTATATAAGTTGGCTCTAGTAATAGCTGCAAAGATGGATGGAGCCAGCAGCCGACGATACTATTGAACCTGCTCTTAGAGCAAGTATAACAGTGAGCTATAGGGCCTGTTCACTTTGATGCCAAAAAAACCTTAACAAATTTTGGCATTACCAAATTTTAGTATAGTTGCCAAAATTTTGGCAAGATTGCCAAAATTTTGACAGGATTTCTTATATAGTTATCTAAATTTGGTAGCAAACTAAATGTAGCCACTTTTTTGGCAACTTTACCAAAATTTGGTAAGGCTGAAAATGGCATCAAAGTGAACAGACCCATAAGCTTACTATAAGCTTATAAGCTTATGTGGAGGAGAGATGTAGCGAAACATCAAATATGGGCCTGTTCGGCAGCCCGTTTCCGCAGCTGTCTGGGCTGCGCTGCACAGCCCAGCCGTTCGGCTGCAACGATTTGGGCTACGCTGCGCAGCGCAGCCGTTCGGCTGCATCTCTCCTTCTCGTTCCCATCACTTCCCTTGTAGCGACTTCTCTCCCATCGCCTTCTCTCCCGAGTCCCGACCTGAGCGCCTCGATCCCCTCCGCTTTCTCTCCCACCGAGCGAAATCTCTCCCATCGCCACACTCCGTCGAGCACCCCAATCCCCTCCGCCTTCTCTCCCAGCCCGAGTGCCTTGATCCCCTCCGCCTTCTCTCCCGTCCCCTCCCGTCGAGCTGCTCCGCCGTGCCTTCCCAATCTCGCCTGGTGCCACGCCTTCTCATCCTCTTCCCTCCTACGCTCCCACCACCCTCGATCTGATCATTTAAATCCAATAGGATGTGAAGTTCATCCTGATTCGGCTGTGGGGGTTGAGGGGAGGGGAAGCTCGGCAGCCAGCCCCATTAGAGTTTGGGTGTTGAGGGGATAGAGTGCAGCCAAGGGCACACATCCAGTCGGGCAAGACCCACGTCGTGTCGCAGTCGGTGTCTTCTCCCCCAAATCCGTCCTGGTCTGACAGCAAGGAGGTAAGAATCATCTCCTTTTTGTGCTTATTGATCTTGCACTTTTTCTGGGCATTTGTGTAATGGCGCCATTCGCCATCTCAACTCTAGGCAGACGAACCGCCGAGTTGATTATTGGACATTTGTACGACCGCAGCCCGAAGCGCTGGCACGTAACCTCAGACGACATAGCACCACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGAGTTGTACGGAGGTATCCCCAATCTGAACAAACGATCTCGCTCAGCTCGTCGACATCGTCATGGTCTCCACCTAAAGTCGCACGATACAATCTGCGTACAACTCCTGCACGGCAGAACCAACTCAAGGCAAGCATTGCATTCTCATATTAGATATCAGTGTGAAAAATGTTTTTGTATATCTGCACCTTGATGTTAGTACTGTGTTTAAGATCTCAAAAACTCGTAAGTTTGACTACTTGTAATGCAAAATTGCACACAGATGGCTGGAGGCCGCGCCTATTGGGATAAAGCCCTTACAAAGATATTCCTCGACTTATGCATTGCTGAGAAGATAAAGCTCAACTACAACAAGAAGGGTCTTACCAACATAGGTTGGCAGAACTTATATCGCAATTTCAGAGAACAAACAGGCAAGAACTATGATAGCAAACAGCTTCAGAACAAATTTAGCACCTTGAAGAGACAGTACAAGCTATGGATGAGCCTAAAGAATAAGAGTGGAGGTGGGTGGGACAACAGTTCTGGCACCATAAGGTGCGATGATGACTGGTGGGAAGACCGTATCGAGGTAACTACATGTAAAAATTGATTTTACTACTGAACTACTATGAGTTTTGGTTGTTTTCTCGTCACGCTTACATTGTCCATATCTGCATTGTAGGAGAATAGGGATGCCAGACAGTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTAACTACTCTTTTTGGCTGCATGGACACGGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCGAGAGAACACCCAGCGGTGGAAGCGATGACAACTTTACTCCGATGCCAAACGACAATGTCGGCCGGTCTAGTGAGGGCCGTGTGGCTCAAAGGGCAGGGAAGGAGCAGGTGGTTGATAGCCCACCACCCAAGAAGAATAAGAATATGGAGTACTATGTAGGGCGCATATCAGAGAGTATGCTTGAAAGGAGTAGGAATGAAAGCAGTGTGATCAGGGGAGAGCAAGATGAGATGAAAGAATTGCTGCACCTTGTAGAAGAGGATGGTGTGGCTCAAGGATCCGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGACGTGCAGCTTTTAAGTGCATTTACCCCGCAGAGAATCGTAAAGCATGGCTCCGATGGACTTGGGAGAATGCTAGTAAAAAGCGATACTAGTCCATGCTGCCACCGAACTACACTTGTTGTCACATGTAGTGTTTGATTGTAATATACCCATCGCCAAATGACATGGCATTATGTAATCGGTTGTTAGACCTTGGCATGTTCTTATGTTATGCATTAGAACCTTTGCTACTTTTATCATATAAATTTGTATCGGTCAGCTTGTCATGTCATTTGGATCTAGTTGCCTTTTCTTTATTTTTTTAACTTGAAAATTGAGTAACCATGCTGCATCCTCACCTGCTGTACAACTGGAAAAATGCACTACATTGATTTTGTACATGCATACATTTTGTAACTGATATTATCATTCTATAAGTTGTAGGTTTCCCTGAATGAAGAGGTGCTAAAGGATAGGCAAGGAGGTCAATACTAGGTAAAAGAAACTATGATATATGCAAAATCATATATTGTTTGTTGAATTGCTCAAACATAGTACATTCCTTGCAGAATGTCTACCTCTGAAACTTCGAGCAGCACAAGCTCCTCGGCTGCACATTTGGATGATGGGTGGTCTACCTGGTGGGACATGGGTGCAGCTGTCGGTGTGCTAGCAGCAGTAGCATCAGCAAGATCAAGTGGTTGCGGAGTGAAAGATGCCACCTTGCCCTTCAAGGAGGTGACGGGTCGTCAATGGGTAGATCTGAATCTTGCTGACAGTAACAAGTGCTACAGAAATTTCCGTCTCCGGCCTACTGCATTCCATTTGTTGCATACAACATTGGTTGCAAAACACGGTCTAAAATCCTCCCGTCATTGTGAGTCGATTGAAGCCTTAGGGATGTTCTTATGGGCTTGTGGCACAAGACAATGTCAAAGACAGATGTCAGATCGATTTGGTCGGTCATTGGACACCGTAAGTAGGAAGTTTGACGAAGTCTTAGATGCCATGTTATCTTTTGCACGGAGGATTATTAGGCCAAGGGACCCAAGCTTTAGATATGTGCATCCTAACCTGCACCAGTTCTCACCATACTTTGATGGGTGTATTGGAGCTATAGATGGAACCTACATTCCAGTCACAGTCCTTGATCCGACTCATGATGATTTCATTAACAGGAAGGGGTTCACCAGCCAAAACGTGTTGGCTATATGCGACATGGGCATGCGGTTTACATTTGTCGCTACGGGTAAGAGGGGGGCTGCGCATGACATGGCTGTTTTCAGGGAGGCAGTGAACACTGCTGACCATTTCCCTCACCCACCCCCAGGTGAGTACATCCAGTTTAAATTACATTGAAGCTTCCCATTTTAAATTACAAAATATGACTTAGTTCATTTTCTAGGCAAGTACTATCTAGTGGATTCTGGTTACCCACTACGCGAGGGTTACATGGCCCCATATCGCAAGACTAGGTACCATTTGAAGCAATTTAATGGCAAAGGTCCTGAAAATCTGTGCGAGATTTTTAACTACCACCATTCTTGTCTACGGAACGTGGTTGAACGCTCATTTGGGGTTTTAAAGAATAAGTGGAAGATTCTAAAGGGGATACCATTGTATCCTATGGAGAAGCAATCAAAGATTATTGTCGCATGCTTCGCGCTGCATAATTTCGCGATGGACAACAACGAACCCGAGATGGACGGAGACAATGTGTTTGGGCAGTACCAGTACCTTCGCACGCCTGGTCAACCAATTGGCCCGTTGCAAGATTGGTTAGCAGCTACTGCCGATGATGATATTGGCACTGTCCGTGATTGGATTGCAGCTGGACTATATGGTTTGGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037780