BGIOSGA037811

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Revision as of 08:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037811| Description = BGIOSGA037811| Definition = Oryza sativa Indica Group BGIOSGA037811, complete gene.| tag = | tid = BGIOSGA037811-TA|...")
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Gene Name

BGIOSGA037811

Description

BGIOSGA037811

Definition

Oryza sativa Indica Group BGIOSGA037811, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA037811-TA

Ensembl Protein ID

BGIOSGA037811-PA

Length

3257

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22040109..22043365

Sequence Coding Region

22040109..22040979,22041105..22042432,22043126..22043365

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22040109..22043365 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22040109..22043365 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGAGGCAGCGAGATGCATGGCCAATGTTTGTTCATCATCGTTTTCCTCATCCATTCTGTCCATGTCCTCCCCGGGTGCATAGCTCAGTCTAGTGATGAGCAAACACTGCTTGCATTCAAGGCCGCCATCTCCGGTGACCCAAACGGGGTTCTTGATACATGGGTCACTACCAAGGGAAGCATGAATGCCACAGACAGCATCTGCCGGTGGCGCGGTGTGTCGTGCCGATCCAGGCAGCACCCTGGTCGTGTGACAGCGCTGGAGCTCATGTCATCCAACTTGATGGGTGTGATAAGCCCAAGTCTGTCCAATCTTTCCTTCCTCCACACACTCAACCTCTCTGGCAACCGTCTCACTGGTGGCATCCCGTTGGAGCTTGGCCAGCTACCTCGCATACGGGTCATCAGCCTTGGTGGGAATTCTCTGATCGGTAACATACCTGTGTCTCTCACCAATTGTGCTCGACTCACACATCTCGAGTTACCACGGAATGGATTGCATGGTGAGATTCCAGCGAACTTCAGCAACTGCAGGGAACTCCGGGTGTTCAATATCAGTGCGAACAGCCTGTCTGGTGGCATCCCCGCATCATTCGGGTCACTGTCGAAGCTTGAGTTCTTGGGCCTGCATCGGAGCAACCTCATCGGCGGCATCCCACCATCATTGGGTAACATGTCCTCACTGTTAGCTTTTGATGCCAGTGAGAATTCCAACCTTGGAGGTAGCATACCTGACACTCTGGGTAGACTCACAAAGCTGAACTTTCTGAGGTTAGCTTTTGCTGGTCTTGGAGGGGCAATTCCATTCTCGTTGTATAACATTTCATCCCTTACTGTACTTGACTTGGGAAACAATGATCTGTCTGCTTCAGAGCACGGTCTGCAGGGAATTGTGCCCCCTGACATTGGTAGGCTGAAGGATCTCGATAAGCTGAACCTTCAGTTCAACCAGTTGGAGGACAAGTGGGACAAGGACTGGCCACTGATGGCTGCCTTAGGGAATTGCAGTAGGCTTTTTGCACTGAGCCTCTCAAGCNATAAGTTTGAAGGTGATCTGCCGGCTTCTCTTGTCAACCTCACAATTGGAATAGAGAAAATCTTTATGAATGAAAACAGGATAAGCGGTGCCATTCCCTCGGAGATTGGCAAGTTCAGAAATCTTGATGTTCTTGCTCTTGCTGACAATGCACTGACGGGCACCATACCAGACACAATTGGTGGTCTCAGCAGCATGACCGGGCTAGATGTCTCAGGCAATAACATATCCGGTGAAATCCCGCCAATGCTGGTTGCAAACCTTTCTAAGCTCGCTTTCCTGGACCTATCAGAGAATGACATGGAGGGAAGCATACCTCTGAGCTTTGAGAGAATGAGCAGTATTGCAATCCTGGACTTGTCTTACAATCAGTTCAGTGGCATGTTACCGAAACAAGTTCTGAGCCTCTCGTCTCTAACCTTGTTCCTGAACTTGTCTCACAACACTTTCTCAGGTCCAATTCCTTCAGAAGTTGGCAGATTAAGCAGCCTTGGGGTTCTCGACTTGTCAAACAATAGGCTGTCTGGAGAGATACCACAGGCGCTAGCTGGGTGTCAATCGATGGAGTACTTGTTTCTGCAAGGAAACCAATTTGGTGGCAGAATTCCCCAATCTCTTGTATCTCTGAAAGGGCTTCAACACCTTGACATGTCACAGAATAACTTGTCTGGTCCAATTCCAGATTTCCTTGCAACTTTTCAGTACTTGCGATACTTAAACTTGTCCTACAACCAGCTTGATGGACCGGTGCCAACAACTGGAGTGTTCAATGCTACGAAAGACTTCTTTGTTGGTGGTAACAGAGTTTGTGGTGGTGTTTCAGAGTTGCAGCTACCGAAATGTCCTGATCGCGCTGGTAAGGGCTCACATAGATCAAGAACTGTGCTGATTGTGTCAGTTTCTGTTGGATCTTTCGTGGCTCTAGTCCTCATCGCAGGTGCCCTTTTTGTATGTGTTCTGAAGCCAATGAAACAGGTTATGCAGAGTAATGAGACATCTCCTCGACCATTATTGATGGAGCAACACTGGAAATTATCCTATGCAGAACTACATAGGGCTACTGACGGGTTCTCTGCAGCTAACCTGATTGGTGTTGGAAGCTTTGGCTCAGTGTACAAAGGAGTTGTAGGCTCTGAAGAGGAGGAAGTCGCAATAAAAGGAAGTAGAAGCATCCGCAGCTATGTTGCAACGGCTTATCCTGACAGGGCCATGGAGATTGTTGATCAAGCAATGTTGCAGCTTAAAGAGAAAGATATGTTTGAAAAGAAGACTGAAGGATGTATAATGTCAGTTCTCAGAGTGGCGCTGCAATGTACAGAGGACTCCCCGAGAGCAAGGATGCTCACAGGATATGTCATCAGAGAGCTAATTTCTGTGAGGAATACTTATGAAGGTTAG</cdnaseq>

Protein Sequence

<aaseq>MGRGSEMHGQCLFIIVFLIHSVHVLPGCIAQSSDEQTLLAFKAAISGDPNGVLDTWVTTKGSMNATDSICRWRGVSCRSRQHPGRVTALELMSSNLMGVISPSLSNLSFLHTLNLSGNRLTGGIPLELGQLPRIRVISLGGNSLIGNIPVSLTNCARLTHLELPRNGLHGEIPANFSNCRELRVFNISANSLSGGIPASFGSLSKLEFLGLHRSNLIGGIPPSLGNMSSLLAFDASENSNLGGSIPDTLGRLTKLNFLRLAFAGLGGAIPFSLYNISSLTVLDLGNNDLSASEHGLQGIVPPDIGRLKDLDKLNLQFNQLEDKWDKDWPLMAALGNCSRLFALSLSSXKFEGDLPASLVNLTIGIEKIFMNENRISGAIPSEIGKFRNLDVLALADNALTGTIPDTIGGLSSMTGLDVSGNNISGEIPPMLVANLSKLAFLDLSENDMEGSIPLSFERMSSIAILDLSYNQFSGMLPKQVLSLSSLTLFLNLSHNTFSGPIPSEVGRLSSLGVLDLSNNRLSGEIPQALAGCQSMEYLFLQGNQFGGRIPQSLVSLKGLQHLDMSQNNLSGPIPDFLATFQYLRYLNLSYNQLDGPVPTTGVFNATKDFFVGGNRVCGGVSELQLPKCPDRAGKGSHRSRTVLIVSVSVGSFVALVLIAGALFVCVLKPMKQVMQSNETSPRPLLMEQHWKLSYAELHRATDGFSAANLIGVGSFGSVYKGVVGSEEEEVAIKGSRSIRSYVATAYPDRAMEIVDQAMLQLKEKDMFEKKTEGCIMSVLRVALQCTEDSPRARMLTGYVIRELISVRNTYEG</aaseq>

Gene Sequence

<dnaseqindica>1..871#997..2324#3018..3257#ATGGGGAGAGGCAGCGAGATGCATGGCCAATGTTTGTTCATCATCGTTTTCCTCATCCATTCTGTCCATGTCCTCCCCGGGTGCATAGCTCAGTCTAGTGATGAGCAAACACTGCTTGCATTCAAGGCCGCCATCTCCGGTGACCCAAACGGGGTTCTTGATACATGGGTCACTACCAAGGGAAGCATGAATGCCACAGACAGCATCTGCCGGTGGCGCGGTGTGTCGTGCCGATCCAGGCAGCACCCTGGTCGTGTGACAGCGCTGGAGCTCATGTCATCCAACTTGATGGGTGTGATAAGCCCAAGTCTGTCCAATCTTTCCTTCCTCCACACACTCAACCTCTCTGGCAACCGTCTCACTGGTGGCATCCCGTTGGAGCTTGGCCAGCTACCTCGCATACGGGTCATCAGCCTTGGTGGGAATTCTCTGATCGGTAACATACCTGTGTCTCTCACCAATTGTGCTCGACTCACACATCTCGAGTTACCACGGAATGGATTGCATGGTGAGATTCCAGCGAACTTCAGCAACTGCAGGGAACTCCGGGTGTTCAATATCAGTGCGAACAGCCTGTCTGGTGGCATCCCCGCATCATTCGGGTCACTGTCGAAGCTTGAGTTCTTGGGCCTGCATCGGAGCAACCTCATCGGCGGCATCCCACCATCATTGGGTAACATGTCCTCACTGTTAGCTTTTGATGCCAGTGAGAATTCCAACCTTGGAGGTAGCATACCTGACACTCTGGGTAGACTCACAAAGCTGAACTTTCTGAGGTTAGCTTTTGCTGGTCTTGGAGGGGCAATTCCATTCTCGTTGTATAACATTTCATCCCTTACTGTACTTGACTTGGGAAACAATGATCTGTCTGGTATGCTGCCGCCTGACTTCGGCATCACCCTCCCGAGAATCCAGTTTCTTAATCTGTACAACTGTCGGCTCCAAGGAAGCATCCCACCATCGATAGGAAATGCGACGAAACTCCGTCGGATCCAGCTTCAGAGCACGGTCTGCAGGGAATTGTGCCCCCTGACATTGGTAGGCTGAAGGATCTCGATAAGCTGAACCTTCAGTTCAACCAGTTGGAGGACAAGTGGGACAAGGACTGGCCACTGATGGCTGCCTTAGGGAATTGCAGTAGGCTTTTTGCACTGAGCCTCTCAAGCNATAAGTTTGAAGGTGATCTGCCGGCTTCTCTTGTCAACCTCACAATTGGAATAGAGAAAATCTTTATGAATGAAAACAGGATAAGCGGTGCCATTCCCTCGGAGATTGGCAAGTTCAGAAATCTTGATGTTCTTGCTCTTGCTGACAATGCACTGACGGGCACCATACCAGACACAATTGGTGGTCTCAGCAGCATGACCGGGCTAGATGTCTCAGGCAATAACATATCCGGTGAAATCCCGCCAATGCTGGTTGCAAACCTTTCTAAGCTCGCTTTCCTGGACCTATCAGAGAATGACATGGAGGGAAGCATACCTCTGAGCTTTGAGAGAATGAGCAGTATTGCAATCCTGGACTTGTCTTACAATCAGTTCAGTGGCATGTTACCGAAACAAGTTCTGAGCCTCTCGTCTCTAACCTTGTTCCTGAACTTGTCTCACAACACTTTCTCAGGTCCAATTCCTTCAGAAGTTGGCAGATTAAGCAGCCTTGGGGTTCTCGACTTGTCAAACAATAGGCTGTCTGGAGAGATACCACAGGCGCTAGCTGGGTGTCAATCGATGGAGTACTTGTTTCTGCAAGGAAACCAATTTGGTGGCAGAATTCCCCAATCTCTTGTATCTCTGAAAGGGCTTCAACACCTTGACATGTCACAGAATAACTTGTCTGGTCCAATTCCAGATTTCCTTGCAACTTTTCAGTACTTGCGATACTTAAACTTGTCCTACAACCAGCTTGATGGACCGGTGCCAACAACTGGAGTGTTCAATGCTACGAAAGACTTCTTTGTTGGTGGTAACAGAGTTTGTGGTGGTGTTTCAGAGTTGCAGCTACCGAAATGTCCTGATCGCGCTGGTAAGGGCTCACATAGATCAAGAACTGTGCTGATTGTGTCAGTTTCTGTTGGATCTTTCGTGGCTCTAGTCCTCATCGCAGGTGCCCTTTTTGTATGTGTTCTGAAGCCAATGAAACAGGTTATGCAGAGTAATGAGACATCTCCTCGACCATTATTGATGGAGCAACACTGGAAATTATCCTATGCAGAACTACATAGGGCTACTGACGGGTTCTCTGCAGCTAACCTGATTGGTGTTGGAAGCTTTGGCTCAGTGTACAAAGGAGTTGTAGGCTCTGAAGAGGAGGAAGTCGCAATAAAAGTCCTGAATCTTCTGCAGCATGGAGCCGAGCGGAGTTTCTTGGCTGAGTGTGAGGCGCTAAGAAGTGTTCGGCATCGCAATCTTGTAAAGATCATCACAGCCTGTTCGACCGTGGATCACTATGGTAATGATTTCAAAGCTTTGGTGTATGAGTTCATGCCTAACAGGGACCTGGACAAATGGCTCCATCCGACCATTGATGATGATGATGAGAGTTTCTCACGGGTGTTAACCATGTCTGAAAGACTGAGGATTGCGCTGGATGTTGCTGAAGCTCTCGATTACCTGCACCGCCATGGCCAAGTGCCCATTGTTCACTGTGATCTGAAGCCAAGCAATGTCCTTCTTGACAATGACATGGTCGCCCATGTAGGGGACTTTGGGCTGTCACGGTTTGTGCTGGGAACAAACAACAATTCCATACAGTATTCTAGTATTTCAGCTGGGATCAAAGGCACTGTCGGATATATTCCTCCAGGTAATTAGGACTCTGAATTCTAAATACTACCACATCTACATGACAAACGTTTCATGAAATACCTGAATAATAACGCATTGACGATTTTATTTCTGTTAATGTTTTCAGAATATGGAATGGGTGGTGAAATTTCAGTGGAGGGGGATGTCTACAGTTACGGAATCCTGCTGCTTGAGATGTTCACTGCAAAGAGGCCAACAGATGATTTGTTTCAGGGAAGTAGAAGCATCCGCAGCTATGTTGCAACGGCTTATCCTGACAGGGCCATGGAGATTGTTGATCAAGCAATGTTGCAGCTTAAAGAGAAAGATATGTTTGAAAAGAAGACTGAAGGATGTATAATGTCAGTTCTCAGAGTGGCGCTGCAATGTACAGAGGACTCCCCGAGAGCAAGGATGCTCACAGGATATGTCATCAGAGAGCTAATTTCTGTGAGGAATACTTATGAAGGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037811