BGIOSGA037816

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Revision as of 08:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037816, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA037816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037816, complete gene.

LocusTag

OS12G0621000

Ensembl Transcript ID

BGIOSGA037816-TA

Ensembl Protein ID

BGIOSGA037816-PA

Length

6212

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22084199..22090410

Sequence Coding Region

22084199..22084305,22084410..22084655,22085758..22085893,22086014..22086073,22086161..22086253
,22086938..22087180,22087345..22087485,22087829..22087999,22088477..22088734
,22088823..22088968,22089058..22089615,22089783..22090056,22090237..22090410

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22084199..22090410 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22084199..22090410 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCGCGACCCCCGATGACGACCCACCGGCGGCGGCGAGCGAAGCCCCGTCGACCTCCTCCGCGGCGGCGGATGAGGACGACCGCGTCTTCCTCGTCCTCCACAGGTGGTGGAGGGAGGCGCAGGAAGGGGGAGGGATCGAGGCGGCCGGGGTGCCGTACGCCGCGGCGCCGTCGGGCCCGACCTCCTACGGCATCGGCATGAAGGTGCTCAGCATGTTCATCTCCGACCAGGCCTTCACCCTCCGCCGCGCCGACGACCTCCTCCAGCCCGACGCCTCCGCCTCCAACGCGGCCTCCTCCAGGACCTACGCCCTCGTCGCCGCCGACCTCTTCTCCAAGGCGCGCGCCTGGCATATTGATTCTGGCAAGAATGCGGGAAAAAAATCATTGTCTATCGAAGAAGGATCTGTAAACATTTACCCTATAATGCTCAGAGTTTCAGTCACGCGAGATACAAATGCACTAACCGTGAAGATCAGCAAAAAGGATAATTCTGCTGAGAACTTTAAACGGGCAAACAAGATTTTGACTGCAGACTCTGAGCCGGTTCATATATGGGATTTCTCTGGACGAACAACTTTTATATTGATGAACGAATGGAATCGAATGCCCCAAGACACTCGGTCTTCTGATCAGGAGATGCCTCTAGAAATACACTTCTATGATCTGTCAGAACCTACGGCAAATGGTACCAATGGGAAAAAAGATGAGTTAGCATTAACAATGAGTCGTTCAATGAGCAACGGCAGCATCATGGGCATGGATCTGGATTCAAGTGGAAGCTCTAAGCAAGTTGGCACTGGTTTAATAGGACTAGACAATCTTGGAAACACATGTTTCATGAACAGTGCAGTGCAGTGCTTAGCTCATACATCCAAGCTGGGTGAGCTTGCGTATTCATTTGGGGATTTGTTGAGGAAGCTATGGGCTCTGGACAGGACCCCTGTTGCGCCTCGCCAATTTAAAGGAAAGCTTGCGCGCTTTGCCCCCCAGTTCAGTGGCTTTAATCAACATGATTCCCAGGAGCTTCTGGCTTTCTTGTTGGATGGACTCCATGAGGACTTGAATCGAGTGAAATGTAAACCATATTCTGAAGCAAAGGATTCAGATGGCCGTCCAGATGAAGAGGTCGCAGATGAGTACTGGGGAAACCATATAGCCCGGAATGATTCTATCATAGTTGATATCTGCCAGGGTCAATACAAGTCGACGTTAGTTTGCCCTGATTGCAGGAAAGTATCTGTAACATTTGACCCATTCATGTACCTGTCTTTGCCCCTGCCTTCAACAACTATGAGAACAATGACTATAACAGTCTTCAATACCGATGGGACTACTGGGCCATCTCCGTATACTGTGAGTGTACCGAAATCTGGAGATACAAAGACTCTTATCGATGCATTAAGCATTGCTTGTTCCTTGAAAGGCGACGAGCGCCTTTTGGTTGCTGAGGTCTACAATAGTGCACTTATCCGGTACTTGGAGGAACCCTCTGAAGTCATCTCCTTGATCAGAGATGGAGATCGCTTGGTTGCATATAAACTTCCAAAAGACAGTGAAGATGCTCCAATAGTGGTGTTCAGAAACCAACGGATGGAGTCCACCCTCACTAGTTTTGGCAGAAAATCCTGGAAGTCTTTTGGTACACCCCTTGTGTCAAGTCTTCCTGACACAATCAATGGGAGTACGATCTTTGAGCTTTACCAAAAGGTTATGACTCCATTCCGAGTACCAAAAGATGATAGTTCAGATGCTGACCACATAATTGGCAAAAGCAGTCCTGTGGAGGAAACCACGGACGTTGATATGAACTCTGATGCAACAGAGTCAACCAGCATAAAAAATAACGATTGTGACGATGAAACAATGACTGAAGATGGAATGCAATTTTACTTTATCAATGAGAGGTTTCCAGACCAACGCATGAAGATAGAAATGGACCAACCTATTAGACTTACTGCTTCACAGAAGCGACTGCATGTGGTTGTGTGTTGGCAGGACAATGGACTAGAGCAATACAATTTTAGTTCTTTAGATAATCTTCCAGAGATCTACAAGGCTGTCCTATTCTCAAGGAGACCACAGGAGACATGTTCTCTATATGCATGCCTTGAAGCTTTTATAAAGGAGGAACCGTTAGGCCCAGAAGACATGTGGTATTGCCCAGGCTGTAAAGAGCATCGCCAAGCTAGTAAGAAGTTAGACCTTTGGAGGCTACCGGAAATCCTTATAATACACCTGAAAAGATTTTCATACAGTCGATATACCAAAAACAAGCTAGAGACATGTGTGGACTTCCCGGTTCATGATCTTGACCTTTCAAAGTATATCGGTAGCAGGGGGCAACAGATTTCCAACCACTATCGACTGTATGCTATTAGTAATCACTATGGAAGCATGGGAGGTGGTCACTATACTGCATATGTTTATCATGAAGGTAAGAAAGGGTGGTATGACTTTGATGACCGTCATGTGGGTCCTATAAGCGAGGAGAGTATAAAGACATCGGCAGCTTATGTTCTTTTTTATAGGCGGATACAGGGGGATGATAATAGGTTAGATGATACAGAAACAGGAATAGATTCTTCTGATTGTACAACATGA</cdnaseq>

Protein Sequence

<aaseq>MPATPDDDPPAAASEAPSTSSAAADEDDRVFLVLHRWWREAQEGGGIEAAGVPYAAAPSGPTSYGIGMKVLSMFISDQAFTLRRADDLLQPDASASNAASSRTYALVAADLFSKARAWHIDSGKNAGKKSLSIEEGSVNIYPIMLRVSVTRDTNALTVKISKKDNSAENFKRANKILTADSEPVHIWDFSGRTTFILMNEWNRMPQDTRSSDQEMPLEIHFYDLSEPTANGTNGKKDELALTMSRSMSNGSIMGMDLDSSGSSKQVGTGLIGLDNLGNTCFMNSAVQCLAHTSKLGELAYSFGDLLRKLWALDRTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDSIIVDICQGQYKSTLVCPDCRKVSVTFDPFMYLSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALSIACSLKGDERLLVAEVYNSALIRYLEEPSEVISLIRDGDRLVAYKLPKDSEDAPIVVFRNQRMESTLTSFGRKSWKSFGTPLVSSLPDTINGSTIFELYQKVMTPFRVPKDDSSDADHIIGKSSPVEETTDVDMNSDATESTSIKNNDCDDETMTEDGMQFYFINERFPDQRMKIEMDQPIRLTASQKRLHVVVCWQDNGLEQYNFSSLDNLPEIYKAVLFSRRPQETCSLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSAAYVLFYRRIQGDDNRLDDTETGIDSSDCTT</aaseq>

Gene Sequence

<dnaseqindica>1..107#212..457#1560..1695#1816..1875#1963..2055#2740..2982#3147..3287#3631..3801#4279..4536#4625..4770#4860..5417#5585..5858#6039..6212#ATGCCCGCGACCCCCGATGACGACCCACCGGCGGCGGCGAGCGAAGCCCCGTCGACCTCCTCCGCGGCGGCGGATGAGGACGACCGCGTCTTCCTCGTCCTCCACAGGTACGAACGAACCCTAGGGCTAGCCCTAACCCCCACCACCCCCCGTAGCTTGGATCGGATCGGGTGGGTGGCTGACCTGACCTTGGTGATGGGGGCGAATGCAGGTGGTGGAGGGAGGCGCAGGAAGGGGGAGGGATCGAGGCGGCCGGGGTGCCGTACGCCGCGGCGCCGTCGGGCCCGACCTCCTACGGCATCGGCATGAAGGTGCTCAGCATGTTCATCTCCGACCAGGCCTTCACCCTCCGCCGCGCCGACGACCTCCTCCAGCCCGACGCCTCCGCCTCCAACGCGGCCTCCTCCAGGACCTACGCCCTCGTCGCCGCCGACCTCTTCTCCAAGGCGCGCGCCTGGTGAGAAGACAAACACACGCTCGCTCTCCTTTCACCTCCACTCGCGATGATGATAGATGGGTTTCCTATGTTTTTTTTTACAACTTCTCCATAGGTTTGATCCGATTATCCTATCGCGCCACATTGAGAACCAGTCGCGAGCAATGCATAGTGTGTTAAAATCCATGGTTGATGATTACTGAAGGAGTAGGGTAGCGGCTACGTTGTACTGTTGATCGCCTCATGTGGTATTGTGAATATATGCAAATCGTAGCTACACTTGCTTCTGAAATCGACTCACATGGTGCTGGTTTCCTTGCTGGAGCTTTGGACAGGGGTTCTCCCTTGTGTTACATGTTTCTGTAAGAGGAAAAACAGCTGCAAAGAACTAGATATATTAGATCGCTCATGGCTGGTATTGTCATGACATATTCCACGTCCAGTTGTTTATCCTCGTGTTGATGTCTAGGGTTTATTACTATGGCACGACGTGGAGGTGGTTTCTAGTGGCGCGCCAACCATTATGATCTATAATTTGTAATTAATATATGAGGCATCCCCATTAACTTCCATGATAACAAGTTGTTGCATTTGTGCAAGCCTTATTTTAATACATTCCCGTGAAGAGATTCACAATTAATCCTATGAATCAACATTCCCTAGTTCTCTGACATCAACTTTGCATCGAGGCATTGAAGCGGATAATTACATCTTCTATCTAGGATACTACTAGTAGCGGCATTGCTGAGTCTACGCTATTTAGTTTAATTTATCCATTCTATTAGAACTTAGATTTTCCATGCTGGCGACTTTCAGTGAAGGTTCACAATTAGGCTGTTGCATTGGAGCCTTCAACTGATTGATGGATCATAGCAAGAAATAATGCACTTCTTTGGAAATGTTTCGAGTCTGAACCATGTAAAAGTCTCTTCTTCTGAATATAAGGGATTAAACTATAAGCCTTAATATGTCAACAGAATGCTGCATTTATGAGTTAGGGCTGGCAGCTATCTAAAATATGCACAGCTGCCAGGTACTATTACACTTCCTTTTGTTGCTTGCTTGCTCTGATGACTTTACTTTTTCAAAGCCTAATTGATTTCTTGATTCTTTTTTCATGTAGGCATATTGATTCTGGCAAGAATGCGGGAAAAAAATCATTGTCTATCGAAGAAGGATCTGTAAACATTTACCCTATAATGCTCAGAGTTTCAGTCACGCGAGATACAAATGCACTAACCGTGAAGATCAGCAAAAAGGTCTAGTTATTTTCCATTTTATTCATCTATTAATCACAGATTTTGTGTTCTGAAGGATGAAGTTTTGGTTTAGTAATCTATCCCTAGAAAAAACTTTTCACTTTGTTCTAAACATTTCAGGATAATTCTGCTGAGAACTTTAAACGGGCAAACAAGATTTTGACTGCAGACTCTGAGCCGGTATTTTTTTTTTCTGATGATTTGTTTTTCAATAAGTAGGATGAATGCTCAAATTATTTTACTTTAACATGTCCATATTGTCTTTAGGTTCATATATGGGATTTCTCTGGACGAACAACTTTTATATTGATGAACGAATGGAATCGAATGCCCCAAGACACTCGGTCTTCTGATCAGGAGGTCAATCTTATTACTACTACCTTGTCATATTCTAAAATTAATTATTTAATTGTATGCAACTTCAGAACATTCTCCCTGCTTACTGTTGCCTGGATGTTTACTACTACTTAAGTTATATTTCAATATGAACTTAGTCAACCCCTTTCCACTCCCACCAATTTTCTCCAAATGCAGTCTATTTGCAATTTGATTTGCTGAAACTTGAGGGAATAGCTAGCAGGCTATCCACATGTCATAGCCAGGATCAACCACTGTATATATGCAGGCATCTAAATCATATATATATATATATATATATATATTTCCGCATGTCATAGCCAGGACCAACCACTGTATATGCAGGCACCAAATAAGTATTTCCGCATGTCACTAAAACGTGTGGGACCGGTCTCACTCAAAACATGCAAAATGAACTTTCGGATGAGGATTGAACTTTGGCCCATCACTATATCGTTATATGCGGTAACAATAGTTACTCTTCCAATACACGTGTGCTGCTAGTTAATCCAGACTGACCAGGCATGATTAAGTTCAGATAAAAACCTGACATTTCTGAACTTATGGTATCTGCTAGGTTTTGTCCACAGTTTCGTCTTTCATTGTCACTAGCTACTACCTCCCATATAATGTTCTTCGTAGCATGTTTTTTTTTTCTTATCCTTAATTCTTCTTTTACATGTTCAGATGCCTCTAGAAATACACTTCTATGATCTGTCAGAACCTACGGCAAATGGTACCAATGGGAAAAAAGATGAGTTAGCATTAACAATGAGTCGTTCAATGAGCAACGGCAGCATCATGGGCATGGATCTGGATTCAAGTGGAAGCTCTAAGCAAGTTGGCACTGGTTTAATAGGACTAGACAATCTTGGAAACACATGTTTCATGAACAGTGCAGTGCAGTGCTTAGCTCATACATCCAAGCTGGTTGACTACTTCCTTGGAGACTTCTATAAAGAAATAAACCATAATAACCCACTGGGGTTGAAGGCATGTTGAAATTCCTTTCCACATAGACATACTTCATGTATTATGCGAATTTATTATTTTGCTTCTTGAACTCATTAGAACAATGTGTTAATGTTAAATAGGGTGAGCTTGCGTATTCATTTGGGGATTTGTTGAGGAAGCTATGGGCTCTGGACAGGACCCCTGTTGCGCCTCGCCAATTTAAAGGAAAGCTTGCGCGCTTTGCCCCCCAGTTCAGTGGCTTTAATCAACATGATTCCCAGGTTAGTTAATTTTATTTTTGAGAATACACAGTTTTTCGTCACTTCCAAACACACACCCTGAATTATATCTTATGGTGGACCCTATTCTATGATTTGCAATTTGTTTGCCACTTAATCCTAGTTCCTACCTATACCAGCTTCTGAATCAAATACCCTAAATTTCTTAAGTTCTGGTGCTACTCTGCCAATTTGATTGATAAGTGCTCCAAACCTACGATTTTTAGGGTCTATTCTATTTCTTAAAAATATATTACTCCTATATTTCTATTTGGTATTTTTGTGATAAACTTACATAATAGACACCTAATACCTAAATGATTTTGTCTACCGATGGTGCTTGTAGGAGCTTCTGGCTTTCTTGTTGGATGGACTCCATGAGGACTTGAATCGAGTGAAATGTAAACCATATTCTGAAGCAAAGGATTCAGATGGCCGTCCAGATGAAGAGGTCGCAGATGAGTACTGGGGAAACCATATAGCCCGGAATGATTCTATCATAGTTGATATCTGCCAGGTTAGTTGCATATGATTGCAACGTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTCTCTGTGTTGATAATACTTGTCCTTTTGGATAAAGGACACGATCTCCAAAAATAAATATATGATTTTATTGAAGTGCTACCTCCGTTTTTTGAACTTTTTCCAAGTCAAACTTCTTTATGGTTTGGCCAAGTTTATAGAAAAATATAGTAATATTTTCAATGCGAAACAAAGGAACTATCAAAATATGTTCAATGTTAGATTTAATGAAACTAATTTGGTCGATAGAGAAAAGGTAGCGTAGGGCAAATAAAATTCCCTTCTCTAGCTGGGGTGGTTGTTGCATTATTGTTTCTTCTGCCAAAATGGACACATGTAAGTCACATGGTTTTATCTCCTGTTGATCATCTTTTGGTGCTCCATTGACAGGGTCAATACAAGTCGACGTTAGTTTGCCCTGATTGCAGGAAAGTATCTGTAACATTTGACCCATTCATGTACCTGTCTTTGCCCCTGCCTTCAACAACTATGAGAACAATGACTATAACAGTCTTCAATACCGATGGGACTACTGGGCCATCTCCGTATACTGTGAGTGTACCGAAATCTGGAGATACAAAGACTCTTATCGATGCATTAAGCATTGCTTGTTCCTTGAAAGGCGACGAGCGCCTTTTGGTTGCTGAGGTATTTTCCTTTTCCCTACATTATCATTATAATCCCGAGTGCTACTGAATATGCCTTGCATACTTATTATTTGATGATCTCTACATAGGTCTACAATAGTGCACTTATCCGGTACTTGGAGGAACCCTCTGAAGTCATCTCCTTGATCAGAGATGGAGATCGCTTGGTTGCATATAAACTTCCAAAAGACAGTGAAGATGCTCCAATAGTGGTGTTCAGAAACCAACGGATGGAGTAAGTACAATCTCATTTTTTACGTTGTGTTGATCTAACTGTCTAAGTTGGGTATTAAATATATGAATGTTGCTGTTTTTTATAAGCAGGTCCACCCTCACTAGTTTTGGCAGAAAATCCTGGAAGTCTTTTGGTACACCCCTTGTGTCAAGTCTTCCTGACACAATCAATGGGAGTACGATCTTTGAGCTTTACCAAAAGGTTATGACTCCATTCCGAGTACCAAAAGATGATAGTTCAGATGCTGACCACATAATTGGCAAAAGCAGTCCTGTGGAGGAAACCACGGACGTTGATATGAACTCTGATGCAACAGAGTCAACCAGCATAAAAAATAACGATTGTGACGATGAAACAATGACTGAAGATGGAATGCAATTTTACTTTATCAATGAGAGGTTTCCAGACCAACGCATGAAGATAGAAATGGACCAACCTATTAGACTTACTGCTTCACAGAAGCGACTGCATGTGGTTGTGTGTTGGCAGGACAATGGACTAGAGCAATACAATTTTAGTTCTTTAGATAATCTTCCAGAGATCTACAAGGCTGTCCTATTCTCAAGGAGACCACAGGAGACATGTTCTCTATATGCATGCCTTGAAGCTTTTATAAAGGAGGAACCGTTAGGCCCAGAAGACATGTGGTATAATTTTTTTATTTTTTATTTTACATTTTTCAGTGTTATATTTTGTAGTGGTTATACTTTTCCTTTCTTTATAAGATTAGAGATGATTCTTTACCCAAGTAAAGATGTTCTTCTTTCCTTTTGAAGTCTTTCGACGGATATAAATTTCCAATTTCTTTGTACAGGTATTGCCCAGGCTGTAAAGAGCATCGCCAAGCTAGTAAGAAGTTAGACCTTTGGAGGCTACCGGAAATCCTTATAATACACCTGAAAAGATTTTCATACAGTCGATATACCAAAAACAAGCTAGAGACATGTGTGGACTTCCCGGTTCATGATCTTGACCTTTCAAAGTATATCGGTAGCAGGGGGCAACAGATTTCCAACCACTATCGACTGTATGCTATTAGTAATCACTATGGAAGCATGGGAGGTGGTCACTATACTGCATATGTTTATGTAAGTGTTCTTTCCCCCACCGTTCATTTTCTGTTACTATTAATGCACGCTTGCTTGTGTGACTTGCATACATCGGTTTGTATGATTGAGGGACTGGTATACTCTTTATTTTGACTATATTTTGCATTTGAGGTTTGAGCCAGAGCCTCTTATGATTAATTACTCATATTTTTGGTGCAGCATGAAGGTAAGAAAGGGTGGTATGACTTTGATGACCGTCATGTGGGTCCTATAAGCGAGGAGAGTATAAAGACATCGGCAGCTTATGTTCTTTTTTATAGGCGGATACAGGGGGATGATAATAGGTTAGATGATACAGAAACAGGAATAGATTCTTCTGATTGTACAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037816

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