BGIOSGA037828

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Revision as of 08:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037828| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037828, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA037828

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037828, complete gene.

LocusTag

OS12G0623900

Ensembl Transcript ID

BGIOSGA037828-TA

Ensembl Protein ID

BGIOSGA037828-PA

Length

4086

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22278313..22282398

Sequence Coding Region

22278313..22278662,22278760..22278847,22279545..22279672,22279750..22279941,22280046..22280248
,22280363..22280526,22280664..22280744,22280837..22281003,22281082..22281187
,22281336..22281586,22281677..22281749,22281818..22281946,22282030..22282398

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22278313..22282398 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22278313..22282398 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCTCACATTGTTGGGTACCCCCGCATGGGCCCCAAGAGGGAGCTCAAGTTTGCCCTGGAGTCTTTCTGGGATGGGAAGAGCAGCGCTGAGGATTTGGAGAAGGTTGCGACCGACCTCAGGGCCAGCATCTGGAAGCAAATGGCTGACGCTGGGATCAAGTACATCCCCAGCAACACCTTCTCGTACTATGATCAGGTTCTTGACACGGCTGCCATGCTTGGTGCTGTCCCAGAGCGCTACTCATGGACTGGTGGAGAGATTGGGTTCAGCACCTACTTCTCGATGGCTAGGGGCAATGCCACTGTCCCTGCCATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTTATCGTCCCTGAACTTGGTCCCAACACCAAGTTCTCCTACTCTTCCCACAAGGCTGTGAATGAATACAAGGAGGCTAAGGCGCTCGGCGTTGACACCGTGCCAGTACTTGTTGGACCAGTTTCATACTTGTTGCTCTCCAAACCTGCCAAGGGTGTAGAGAAGTCGTTCGCTCTTCTTTCCCTTCTGAGCAGCATCCTTCCTGTCTACAAGGAGGTTATTGCTGAGTTGAAGGCAGCTGGTGCTACTTGGATTCAGTTTGATGAACCCACACTTGTTCTTGACCTTGACTCTCACCAATTGGCTGCATTCTCTGCTGCATACACAGAACTTGAGTCGGCACTTTCTGGATTGAATGTGCTTATTGAGACATACTTCGCTGACATTCCTGCTGAATCATACAAGACCCTCACATCCCTGAACAGCGTGACTGCTTATGGTTTTGACCTTATCCGTGGAGCCAAGACTCTTGACCTTATCAAGAGTGCTGGTTTCCCCTCTGGAAAGTACCTCTTTGCCGGTGTTGTGGATGGACGCAACATCTGGGCTGATGATCTCGCTGCATCTCTCACTACCCTTGAGTCTCTTGAGGCTATTGTTGGAAAGGACAAGCTTGTGGTCTCGACTTCCTGCTCACTCATGCACACCGCTGTGGATCTTGTAAATGAGACCAAGCTCGATAGCGAGATTAAGTCATGGCTCGCTTTTGCTGCCCAAAAGGTGGTTGAGGTGAATGCCCTTGCTAAGGCATTGGCTGGACAGAAGGATGAGGCTTACTTTGCAGCAAACGCTGCTGCTCAGGCCTCCAGGAGGTCATCACCTCGTGTGACAAACGAGGAAGTCCAAAAGGCTGCTGCTGCTCTGAAGGGGTCTGACCACCGCCGTGCTACCAATGTTAGCGCTAGACTGGACGCACAGCAGAAGAAGCTCAACCTTCCAGTCCTTCCTACAACCACAATTGGTTCATTCCCACAGACTGTGGAGCTCAGGAGAGTCCGCCGTGAGTACAAGGCAAAAAAGATCTCTGAGGAGGAGTACATCAGTGCCATCAAGGAGGAAATCAGCAAGGTTGTTAAGATCCAGGAAGAGCTTGACATCGATGTCCTTGTTCACGGCGAGCCTGAGAGAAACGATATGGTTGAGTACTTCGGTGAGCAGCTTTCTGGTTTTGCATTCACTGCCAACGGATGGGTGCAATCTTATGGATCACGGTGTGTCAAGCCACCAATTATCTATGGTGATGTGAGCCGCCCCAACCCCATGACTGTGTTCTGGTCCAAGTTGGCGCAGAGCATGACCTCTCGCCCCATGAAGGGAATGTTGACTGGTCCCGTCACAATCCTTAACTGGTCTTTTGTCAGGAATGACCAGCCGAGGTTTGAGACATGCTACCAGATTGCTCTTGCCATCAAGAAGGAGGTCGAGGACCTTGAGGCTGGTGGTATTCAGGTCATCCAAATCGATGAGGCTGCTTTGAGAGAAGGTCTGCCACTCCGCAAGGCGGAGCATGCTTTCTACTTGGACTGGGCTGTTCACTCCTTCAGAATCACCAACTGCGGTGTTCAGGACACCACCCAGATCCACACCCACATGTGCTACTCTAACTTCAACGACATCATCCACTCCATCATCAACATGGACGCTGATGTGATCACCATCGAGAACTCCCGGTCCGACGAGAAGCTGCTCTCCGTCTTCCGCGAGGGTGTGAAGTATGGTGCTGGCATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGGATCCCGTCCACAGAGGAGATTGCGGACCGCGTCAACAAGATGCTCGCGGTGCTCGACACTAACATTCTCTGGGTGAACCCTGACTGCGGTCTCAAGACCCGCAAGTACAACGAGGTCAAGCCCGCCCTTACCAACATGGTTTCGGCCGCCAAGCTCATCCGCACCCAGCTCGCCAGCGCGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSNTFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFALLSLLSSILPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLIETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIWADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVVEVNALAKALAGQKDEAYFAANAAAQASRRSSPRVTNEEVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGIQVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKMLAVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK</aaseq>

Gene Sequence

<dnaseqindica>1..350#448..535#1233..1360#1438..1629#1734..1936#2051..2214#2352..2432#2525..2691#2770..2875#3024..3274#3365..3437#3506..3634#3718..4086#ATGGCGTCTCACATTGTTGGGTACCCCCGCATGGGCCCCAAGAGGGAGCTCAAGTTTGCCCTGGAGTCTTTCTGGGATGGGAAGAGCAGCGCTGAGGATTTGGAGAAGGTTGCGACCGACCTCAGGGCCAGCATCTGGAAGCAAATGGCTGACGCTGGGATCAAGTACATCCCCAGCAACACCTTCTCGTACTATGATCAGGTTCTTGACACGGCTGCCATGCTTGGTGCTGTCCCAGAGCGCTACTCATGGACTGGTGGAGAGATTGGGTTCAGCACCTACTTCTCGATGGCTAGGGGCAATGCCACTGTCCCTGCCATGGAGATGACCAAGTGGTTTGACACCAACTAGTAAGTCCTTTGCTTCCATTTAAGCTGTCTGACAGTAACATTTTATTTAGATTTCACATTCAACATTTTGCTAACTGCTGCTGTTGTGCCTTTACAGCCACTTTATCGTCCCTGAACTTGGTCCCAACACCAAGTTCTCCTACTCTTCCCACAAGGCTGTGAATGAATACAAGGAGGCTAAGGCGGTAAGATACTAGGATTACATCTTACGTCTCTGTCTGGTTCATGATTGTTTTCTCTGCCTGACTACATAGGCGTTGCTAACACATTCTTATTGTCATTAATGTCTTAGTTCGTAAAGTTACTTATTAGTTTAGCGTGTTGCTTTCTGCTATTATAGTGCATTTGCTTAATAATTTTGTCCTAGAAAAGAAATTCTGATGTACATTAAATGGCATGCTTACCATGATTTTTTTTGAAGATTGTCACTCCTTCAGATTGATGGCCTGTAAATCACATGCCCTCCAAGTGACAGTTTGTTTAAGTTCAGTGTTAATACTCGTGTCCAAGCAAATTTTTGGCCCCTTGTTTAGTATTTTGAAACTAGCAATTTCAGATTTGCAAAGACTAAAATTCACTTTACATTTATGAAATAATGTTTTTTTAGCACTATATGTTGTTTCCATCTTTCTCAAAAGATGTCCATGTTGTTTGTGGCGAAATTGTCTGATTTTACCTATGCTTAATTGGTGAGTTTACCTGAAACATGCTTTGGTTGAATTTACTATCTTGTTCCAGTTTGTGAATAGTAACATTTCTATTTTTAAGCATCAAATTCTGAATTAAGTAGTATTCCTTCTGGATTGAAAATCATAGTGTTTTCTTAAAAATTAAGATGTAATCTGGTCGTTTGTATGTCTCATGTAATTGTTCTTCATGCAGCTCGGCGTTGACACCGTGCCAGTACTTGTTGGACCAGTTTCATACTTGTTGCTCTCCAAACCTGCCAAGGGTGTAGAGAAGTCGTTCGCTCTTCTTTCCCTTCTGAGCAGCATCCTTCCTGTCTACAAGTAAGTGTACAAACAAGTCTATAACTGCTGCTAGCGCTAAATCTTCAGTTCATAATTTGATGCATGATGATTTGTAGGGAGGTTATTGCTGAGTTGAAGGCAGCTGGTGCTACTTGGATTCAGTTTGATGAACCCACACTTGTTCTTGACCTTGACTCTCACCAATTGGCTGCATTCTCTGCTGCATACACAGAACTTGAGTCGGCACTTTCTGGATTGAATGTGCTTATTGAGACATACTTCGCTGACATTCCTGCTGAATCATACAAGTATGTTTATTTCCTGTACTATCGTATCATTACCAAACCCGCCTTTCCTTTAGCATGCTTTTTCTTTTTAGTGGCAGAACACTGATACTGCCTTTTCACTGCAGGACCCTCACATCCCTGAACAGCGTGACTGCTTATGGTTTTGACCTTATCCGTGGAGCCAAGACTCTTGACCTTATCAAGAGTGCTGGTTTCCCCTCTGGAAAGTACCTCTTTGCCGGTGTTGTGGATGGACGCAACATCTGGGCTGATGATCTCGCTGCATCTCTCACTACCCTTGAGTCTCTTGAGGCTATTGTTGGAAAGGGTAAGCAATTAAGCATGAAGTTATTATATCTGTTATATTTTAATAGGTACAATTTGCTGTATCCAATAATATCCTCAATTTCTGCACATCCAACAATACCTTTCATTTCTGCAGACAAGCTTGTGGTCTCGACTTCCTGCTCACTCATGCACACCGCTGTGGATCTTGTAAATGAGACCAAGCTCGATAGCGAGATTAAGTCATGGCTCGCTTTTGCTGCCCAAAAGGTGGTTGAGGTGAATGCCCTTGCTAAGGCATTGGCTGGACAGAAGGATGAGGTATGGTACTCTCTTTCACCCTTTATTTATTCTCTCACCTCTTAGTAAGAGATCAGGCTTAGTTCTCAATATTATTCGGAGAAACTTCTGCTGCTGCTCAGGCTTACTTTTGTACATTTGTAAACAATATTGTACAGGCTTACTTTGCAGCAAACGCTGCTGCTCAGGCCTCCAGGAGGTCATCACCTCGTGTGACAAACGAGGAAGTCCAAAAGGCTGTAAGTACCTTGCGTTTTTGGCCAGCATTTGCTGATTTCATATCAACATAACTTCACATGTTTTTCTTAAACACATGATATTGTTTGTGAAGGCTGCTGCTCTGAAGGGGTCTGACCACCGCCGTGCTACCAATGTTAGCGCTAGACTGGACGCACAGCAGAAGAAGCTCAACCTTCCAGTCCTTCCTACAACCACAATTGGTTCATTCCCACAGACTGTGGAGCTCAGGAGAGTCCGCCGTGAGTACAAGGCAAAAAAGTGAGTAACAGTCCACATCAACGCTTCACTTGTTTCCCTTCTTTCGTCTATATTACTCATAGCAAAATACTGCTACAGGATCTCTGAGGAGGAGTACATCAGTGCCATCAAGGAGGAAATCAGCAAGGTTGTTAAGATCCAGGAAGAGCTTGACATCGATGTCCTTGTTCACGGCGAGCCTGAGGTCAGTATCCTTGTGTACTGTTTGTGTTTTCTAGACTTTGCACCTGGCTGTTTGAGAAAACAAAATAAATATATTTATTGAAGCATTAACAAAGTTTGGTTTGTTCTGCATTGAAGTAAGCTAATTGGCATGTATTTTATACTTTCAGAGAAACGATATGGTTGAGTACTTCGGTGAGCAGCTTTCTGGTTTTGCATTCACTGCCAACGGATGGGTGCAATCTTATGGATCACGGTGTGTCAAGCCACCAATTATCTATGGTGATGTGAGCCGCCCCAACCCCATGACTGTGTTCTGGTCCAAGTTGGCGCAGAGCATGACCTCTCGCCCCATGAAGGGAATGTTGACTGGTCCCGTCACAATCCTTAACTGGTCTTTTGTCAGGAATGACCAGCCGAGGTCAGTGCCTGTTGTTGATAATGTAATCTAATTTGTTCTGGTTGTGAATGAGCATTCTTTTCTGAGTCTGACATTCATACGCTGGCTCAGGTTTGAGACATGCTACCAGATTGCTCTTGCCATCAAGAAGGAGGTCGAGGACCTTGAGGCTGGTGGTATTCAGGTTGGTCCTGTTCTATAATTTGGTTCTCAAGAGAATCTTGCTTACGTTTTTTTAATGGTCCTTTGCAGGTCATCCAAATCGATGAGGCTGCTTTGAGAGAAGGTCTGCCACTCCGCAAGGCGGAGCATGCTTTCTACTTGGACTGGGCTGTTCACTCCTTCAGAATCACCAACTGCGGTGTTCAGGACACCACCCAGGTAATTTGCCTTGATTACACTGTCGCTGGAGCCTCGCATTGTCATCGCCTATCTTCTGGAGCTAAGAAATTTCTCTTTGACAGATCCACACCCACATGTGCTACTCTAACTTCAACGACATCATCCACTCCATCATCAACATGGACGCTGATGTGATCACCATCGAGAACTCCCGGTCCGACGAGAAGCTGCTCTCCGTCTTCCGCGAGGGTGTGAAGTATGGTGCTGGCATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGGATCCCGTCCACAGAGGAGATTGCGGACCGCGTCAACAAGATGCTCGCGGTGCTCGACACTAACATTCTCTGGGTGAACCCTGACTGCGGTCTCAAGACCCGCAAGTACAACGAGGTCAAGCCCGCCCTTACCAACATGGTTTCGGCCGCCAAGCTCATCCGCACCCAGCTCGCCAGCGCGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037828