BGIOSGA037851

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Revision as of 08:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037851| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037851, complete gene.| tag = OsI_392...")
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Gene Name

BGIOSGA037851

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037851, complete gene.

LocusTag

OsI_39228

Ensembl Transcript ID

BGIOSGA037851-TA

Ensembl Protein ID

BGIOSGA037851-PA

Length

3349

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22597246..22600594

Sequence Coding Region

22597246..22597848,22597934..22598083,22598159..22598455,22598540..22598671,22598736..22598855
,22599282..22599545,22599621..22599812,22599891..22600025,22600104..22600228
,22600299..22600377,22600460..22600594

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22597246..22600594 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22597246..22600594 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAATTGTATGTTCCACTCGAAGATTCTGTACTCTAGTGAAACATCTCAGTCAGGATAAGAAAGATGAAATTGAAAGAATTGGATTTGGATCCCTACTATCACTTCCTGATATCACTCTTGAGCGAAAATTGATTGGCCAAATAGCGGACAGATATGACCCAAATATTGAGTCAGTCATCATCCAAGGAACTGCAGTCCCAATAACCCCTTGGGATGTGCAGTGTATAATGGGTTTACGTGCAGACGGGCTGATTATCGAACCAAAGCCGCACATGGATGACGACGACTACAAGTATTACTTCATATACAAGGAAAAACAAGGTATGAATATTTCGCTACATCACTTGGAGGAACAACTAATAAAGGCAAAAAATGCAGATGAACACTTCATTAGAAGATTTGTCCTCTTCACAATTGGGTTCCTTCTATGTCCTACAACAAAAGCATTTGTCAGTTCACATTATCTAGCATTAGTGAAGGACATTGAACAGATTAGACACATCAATTGGGCTAAAGTTACTAGAGATTTTTTAATCAAGTCTCTAAATGCTTTGAAGACTGGACAGAGAAGTCTTGAAGGAAATGTGGCATTGCTTCAGTTTTGGGCATGGGAACATGTACACGTGGAAGATGAGAGTTTCAACCTAAACTACGTTGGCAGGCCACCACCTTTGATGGCCTACTGGAATGAAATCAATGTCAACAGCTGGCTAAAGTTTGACAAAAAGGGTGCCCTAGACATAGGAAAACTGGTGCTGGTCATCGCCGATCCAAGAACTTGTCATGTTACCGAAGATGAAGTACACATATGCGATGATGACAAACAGCAAGAAGTACCCGAAGAGCTAGTACATATAATAGATGATGAAAAACACAAAGATGTAACTGAAGGGCCAGTACAAATAAGTGACGATGAAAAAATGGCAGAAAAAATGGCTGAGCCAGTCAATTCAGAATGTCATAATTACACGCATGATAGCCCACATGGGTTTAGCGACGACCAAGTATATGCACAAACAAGTCCTGAAAGAAGCCAAAAATCCCAGCCTACCAATGTAGATCTCATCATGAATCAACTCCTACTGATACAAAAGAGCTGTCAGTTCCTGGACAACAAAATTTCAACAAAACTGATTTCAATTGAGGGTGTTTGTTTAGAAAACAAAAGGGATATCCAGGAAATGAAGTTAAAGATATGCAAGCCATCAAGGTCCAAAAAAACTGACATAGCTGCTGGACCAAGCAAACACCAATTCAAATCTGAAAATCAACACCGTGCCAATGAGGATGATCTCAAGCTCTCAACAATAGCAGGAAGGGTCATCAAACCAACACACATGTCGCAAACAGATTTTATATACTACAAAAGAAAATTTGCCAATAAAGAACAAAAAACTAAAGATCTAAGCTTGATGGAGCAAGTAACATTAAGATACATCTCCAAGTGTGAGGATGACAAATTACTATCAAGTATTGCGGGAATAAACTTATTTTCGCAATTCCTTAGACCACTTATTCAACCTAAAGATGCACCAGCAAAATCTAAGTGGTTATCAGGCAGTGTTATAGATGCATATGTACAAATCATCATGGACATGCAATCCGAAACGCCAAGGGCGCAAGGTACAGCTTTCCTTGAAACTGATGCACATTGCCAGCAATGGAAGATGAATGGCGAAAATAAAGGTACAACCAGCAAAAGATATCGACAACAAAGAGCAGATTCTGCAATCAAGTATTTTGATCATGAAATGATCTTCCTGCCCCTACATAGGAACTCAGACCACTGGTATGTTGCTGTCATCAATGGTGCAAAGGAAAAAAACAGATACTACTCACTGCGTATGGATAAGAGCAATTATGCAGCGGACAAAGACCTAAAAAATACAATCAAAGGGATTGACAAGTATCTTAACTATACAAACAAAGAAAATGTCAGCACTTCAAAATGGAAGAACAAGAAAATAACATCATGGCCTATTTGCCCAATGCAAGTGCCTCAACAGAAGGACAGCTGGTCGTGTGGCTTGTATACGCTGAGGTGTATGGAGCACTGGAATGGAAAAGATTTAGCCCCTGAATATCATGCAATGAACACAACTACTACTTTCAGAGCTAAGCTGCCATCCATTCTAATCAATTCTTCAATGAATGAGGTCATCGAAGTCCAGGATGAACTCAAACGACTAGAAGCACAGGAAGGACAAGACAACATATCTCAAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MTIVCSTRRFCTLVKHLSQDKKDEIERIGFGSLLSLPDITLERKLIGQIADRYDPNIESVIIQGTAVPITPWDVQCIMGLRADGLIIEPKPHMDDDDYKYYFIYKEKQGMNISLHHLEEQLIKAKNADEHFIRRFVLFTIGFLLCPTTKAFVSSHYLALVKDIEQIRHINWAKVTRDFLIKSLNALKTGQRSLEGNVALLQFWAWEHVHVEDESFNLNYVGRPPPLMAYWNEINVNSWLKFDKKGALDIGKLVLVIADPRTCHVTEDEVHICDDDKQQEVPEELVHIIDDEKHKDVTEGPVQISDDEKMAEKMAEPVNSECHNYTHDSPHGFSDDQVYAQTSPERSQKSQPTNVDLIMNQLLLIQKSCQFLDNKISTKLISIEGVCLENKRDIQEMKLKICKPSRSKKTDIAAGPSKHQFKSENQHRANEDDLKLSTIAGRVIKPTHMSQTDFIYYKRKFANKEQKTKDLSLMEQVTLRYISKCEDDKLLSSIAGINLFSQFLRPLIQPKDAPAKSKWLSGSVIDAYVQIIMDMQSETPRAQGTAFLETDAHCQQWKMNGENKGTTSKRYRQQRADSAIKYFDHEMIFLPLHRNSDHWYVAVINGAKEKNRYYSLRMDKSNYAADKDLKNTIKGIDKYLNYTNKENVSTSKWKNKKITSWPICPMQVPQQKDSWSCGLYTLRCMEHWNGKDLAPEYHAMNTTTTFRAKLPSILINSSMNEVIEVQDELKRLEAQEGQDNISQI</aaseq>

Gene Sequence

<dnaseqindica>1..603#689..838#914..1210#1295..1426#1491..1610#2037..2300#2376..2567#2646..2780#2859..2983#3054..3132#3215..3349#ATGACAATTGTATGTTCCACTCGAAGATTCTGTACTCTAGTGAAACATCTCAGTCAGGATAAGAAAGATGAAATTGAAAGAATTGGATTTGGATCCCTACTATCACTTCCTGATATCACTCTTGAGCGAAAATTGATTGGCCAAATAGCGGACAGATATGACCCAAATATTGAGTCAGTCATCATCCAAGGAACTGCAGTCCCAATAACCCCTTGGGATGTGCAGTGTATAATGGGTTTACGTGCAGACGGGCTGATTATCGAACCAAAGCCGCACATGGATGACGACGACTACAAGTATTACTTCATATACAAGGAAAAACAAGGTATGAATATTTCGCTACATCACTTGGAGGAACAACTAATAAAGGCAAAAAATGCAGATGAACACTTCATTAGAAGATTTGTCCTCTTCACAATTGGGTTCCTTCTATGTCCTACAACAAAAGCATTTGTCAGTTCACATTATCTAGCATTAGTGAAGGACATTGAACAGATTAGACACATCAATTGGGCTAAAGTTACTAGAGATTTTTTAATCAAGTCTCTAAATGCTTTGAAGACTGGACAGAGAAGTCTTGAAGGAAATGTGGCATTGCTTCAGGTATGTTACGAATTAATTTTGGTCTCAATAATATATGCAATAATTTTGGTCTCAATAACATATGCAATACTATAATGTCATGCAGTTTTGGGCATGGGAACATGTACACGTGGAAGATGAGAGTTTCAACCTAAACTACGTTGGCAGGCCACCACCTTTGATGGCCTACTGGAATGAAATCAATGTCAACAGCTGGCTAAAGTTTGACAAAAAGGGTGCCCTAGACATAGGAAAAGTAAGTGCCAAAACCTCTAAGCTACAATATAGTTTATTCACAGTTAATACATAAGTCTTGTTGCTCAACAAACAGCTGGTGCTGGTCATCGCCGATCCAAGAACTTGTCATGTTACCGAAGATGAAGTACACATATGCGATGATGACAAACAGCAAGAAGTACCCGAAGAGCTAGTACATATAATAGATGATGAAAAACACAAAGATGTAACTGAAGGGCCAGTACAAATAAGTGACGATGAAAAAATGGCAGAAAAAATGGCTGAGCCAGTCAATTCAGAATGTCATAATTACACGCATGATAGCCCACATGGGTTTAGCGACGACCAAGTATATGCACAAACAAGTCCTGAAAGAAGCCAAAAATCCCAGGTTAAATTTGTTGCCAACACAGTTAAATAACTGTTATGAGTTACTATCCACGATGGACATATAACGTTTTAAATTCTTTTGCAGCCTACCAATGTAGATCTCATCATGAATCAACTCCTACTGATACAAAAGAGCTGTCAGTTCCTGGACAACAAAATTTCAACAAAACTGATTTCAATTGAGGGTGTTTGTTTAGAAAACAAAAGGGATATCCAGGTATAACTTATTTTATCTACGATAAATTATTCTTACAACTAATGCAAACTTTTTCCATTGGCAGGAAATGAAGTTAAAGATATGCAAGCCATCAAGGTCCAAAAAAACTGACATAGCTGCTGGACCAAGCAAACACCAATTCAAATCTGAAAATCAACACCGTGCCAATGAGGATGATCTCAAGGTTACACTCCAAACTCCTATTCAATTCTGAATATCAACTATATATAGGCCTAAAAACCATCGGGTGTACATACTACAGCAAAAATTTCAGGAAAAAGACTTTCCAAGTGAAATGACATTGCATATTCCCCAACCTGTTTTGAGCGACCACAAGAAAACTGAAGATAATCTCCCTCAACAGGCAATATTTTATTCATCATTTCCACTACCTTTTGGTGTACATATTATTTTCAATGAAATAACTTTACATTTCTACCAGTAAACAACAAATGCCGATGAAATCCATGCCATAGGAACAGCTAACTTGCCATACGTTATCCAAAGTGACGATGAAAGCGTGGTTGAACCAAAACAGGTAACTATCTATTCAAATTTGATAAAAAAATATAATCTGAACTTCGTACAAACAATATAATTATCCTTGCAGCTCTCAACAATAGCAGGAAGGGTCATCAAACCAACACACATGTCGCAAACAGATTTTATATACTACAAAAGAAAATTTGCCAATAAAGAACAAAAAACTAAAGATCTAAGCTTGATGGAGCAAGTAACATTAAGATACATCTCCAAGTGTGAGGATGACAAATTACTATCAAGTATTGCGGGAATAAACTTATTTTCGCAATTCCTTAGACCACTTATTCAACCTAAAGATGCACCAGCAAAATCTAAGTGGTTATCAGGCAGTGTAAGCATTTTATACGTACTAATCCCTTACAACTCAACTTTCACAATATTTACATTGATGATTTGTATTGAACAGGTTATAGATGCATATGTACAAATCATCATGGACATGCAATCCGAAACGCCAAGGGCGCAAGGTACAGCTTTCCTTGAAACTGATGCACATTGCCAGCAATGGAAGATGAATGGCGAAAATAAAGGTACAACCAGCAAAAGATATCGACAACAAAGAGCAGATTCTGCAATCAAGTATTTTGATCATGAAATGGTAACTTAAAAATATCCCACATTACTAATCTTATGTCCATTCAACATATAAATGGCTTCCATACAATTTTTCTTGCAGATCTTCCTGCCCCTACATAGGAACTCAGACCACTGGTATGTTGCTGTCATCAATGGTGCAAAGGAAAAAAACAGATACTACTCACTGCGTATGGATAAGAGCAATTATGCAGCGGACAAAGACCTAAAAAATACAGTATGCTATACAGCAATGTCAAACATTGAACTTCAGTGCTACAAACATATGCACTTACTATACTATACTTGTGTGTAGATCAAAGGGATTGACAAGTATCTTAACTATACAAACAAAGAAAATGTCAGCACTTCAAAATGGAAGAACAAGAAAATAACATCATGGCCTATTTGCCCAATGCAAGTGCCTCAACAGAAGGACAGGTAACATGTCATCCTAATGTTTCATTTCTGCTTCATGAATAAAAGTCTCAAATTGTGAGTTAAATCACAGCTGGTCGTGTGGCTTGTATACGCTGAGGTGTATGGAGCACTGGAATGGAAAAGATTTAGCCCCTGAATATCATGCAATGGTATGTTACCTCTAAACTAGTGAACTTAGATTTACATGACAGAAAAATAGAATGGCCCTTCTAATACTATGTTCCTTTTCAGAACACAACTACTACTTTCAGAGCTAAGCTGCCATCCATTCTAATCAATTCTTCAATGAATGAGGTCATCGAAGTCCAGGATGAACTCAAACGACTAGAAGCACAGGAAGGACAAGACAACATATCTCAAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037851

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