BGIOSGA037866

From RiceWiki
Revision as of 08:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037866| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037866, complete gene.| tag = OS12G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037866

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037866, complete gene.

LocusTag

OS12G0636100

Ensembl Transcript ID

BGIOSGA037866-TA

Ensembl Protein ID

BGIOSGA037866-PA

Length

4541

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22818195..22822735

Sequence Coding Region

22818195..22818234,22818345..22818416,22818731..22818904,22819014..22819148,22819880..22820019
,22820317..22820406,22820537..22820659,22821063..22821215,22821505..22821621
,22822291..22822461,22822555..22822634,22822711..22822735

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22818195..22822735 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22818195..22822735 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGCCTCAGGCCTTCGAGCTCCTCCTCGGCAGAGATCGAGACGCGTGGCCGCGCGGGGCCGCGTTCCTCGTCGCCGCCCACTACGGGGACGTCCGCGAAATGAAGAGGATTGCAAAGGAGCTGGACGAGGACGGCAAAGGGATCGAGGCGACTGTGGCTAACACAAGCTTCCTCGGCATGAACGCCCTTCACGCACTGGGTTGGCTCGGCAAGGTGCCGGCCTACCGGTATCTGGTAGAGGAGGTCAAAATGGACGTCAACAAGGCCGACACTGCTCAGGGATTCACACCCCTGGAGCATGCCGTCTACCATGGTCGCCTGCCTGCCACCAGATACCTCCTTGATCATGGCGCTGATGTGCATCAAATTCGCTCTACGGGAAATGTCTCTCTTCTTCACTCAGCTGCAGTAAAAGGGTTCTCTGAAGTAGCAAAATTTCTGCTTTCTAGAGGAGTTAATGTTGATGCAGAATCAGAAATGGGGACACCACTGGCTCTTGCTGCTTTCAAAGGATATGATAGTACTGTCAAGGTCCTTTTGGAGCACAATGCTGATCCCAACAAGGTTACAAACAAGGCACTTGGTGCACCTTTAGACTTGGCATTAACCAGCTCTTCTGTGTCCTGTGTGAAGCTGTTGGTTCAGGCTGGAGCTGAAGTGAAAGTTGAGGGGCCAAATAATCATTTGGTAAGAGCTGCTGAGAAAGGCTTAACTGAAGCTATTAAATGCATGTTGGAAGCTGGTGCAAACCCAAATGTTCCTGACAGGCTCGGGAGAATGCCAATAGAGCTGGCTGCTGAGTATGGCACACGGGAAGATGTTGAGATTCTCTTTCCTTTCAGCTCTGCTATTCCAACTGTGGCAAATTGGAGTGTTGATGGAATAATTAATCATGTACAGTCAGAAATCAAGCAACTAGAGATATTATTTACTCAGGACGATAATTTTATCAAAAAGAGAAGGTCTGACATGAAACAACAAGGGGATGCTGCATTTAAGAAGCAGGATTATCTAAATGCATCAGTGTTCTACACTCAGGCACTGAAGGTTGATCCGTTTGATGGCACGTTGTTCTCAAACAGGAGTCTTTGCTGGCTCCGCATGGGTGATGGAGAAAGGGCTTTGGATGATGGCAATGCATGCGAAAAGCTACGGCCAAAGTGGGCAAAGTCCTACTATCGGCAAGGAGCAGCTCTAATGTTTCTGAAGGAGTATGAGAGGGCTCATAGGGCACTTGGTCGAGCTTTAGAGTTGGACCCTGAAAGTGAAGAGATCGAGAATTTGTATTGGGAGTCGATGGAACTGTGCGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MALPQAFELLLGRDRDAWPRGAAFLVAAHYGDVREMKRIAKELDEDGKGIEATVANTSFLGMNALHALGWLGKVPAYRYLVEEVKMDVNKADTAQGFTPLEHAVYHGRLPATRYLLDHGADVHQIRSTGNVSLLHSAAVKGFSEVAKFLLSRGVNVDAESEMGTPLALAAFKGYDSTVKVLLEHNADPNKVTNKALGAPLDLALTSSSVSCVKLLVQAGAEVKVEGPNNHLVRAAEKGLTEAIKCMLEAGANPNVPDRLGRMPIELAAEYGTREDVEILFPFSSAIPTVANWSVDGIINHVQSEIKQLEILFTQDDNFIKKRRSDMKQQGDAAFKKQDYLNASVFYTQALKVDPFDGTLFSNRSLCWLRMGDGERALDDGNACEKLRPKWAKSYYRQGAALMFLKEYERAHRALGRALELDPESEEIENLYWESMELCG</aaseq>

Gene Sequence

<dnaseqindica>1..40#151..222#537..710#820..954#1686..1825#2123..2212#2343..2465#2869..3021#3311..3427#4097..4267#4361..4440#4517..4541#ATGGCGCTGCCTCAGGCCTTCGAGCTCCTCCTCGGCAGAGGTGATCCATCCATCCATTCCCTCATCCTCCCTCCCTAAACCCTAGCGATCGATCGTTTGTTTCAGTTTGTTCTTAATAATCTCATCTTTTCCATTGCTCCATCCGTGCAGATCGAGACGCGTGGCCGCGCGGGGCCGCGTTCCTCGTCGCCGCCCACTACGGGGACGTCCGCGAAATGAAGAGTAAGCCACATCCAAGAACCCATTTTCTTTCCCCCCTTTGGGTTCTGCTTCTGCATCGCATTTGGTACGAATTTCTTGCTGAACATGGCTGCGGGGTTTTCATGTGTGGGTGCTTGCGCTGGATTCTTCTGGTATGATGTTGATCTGTTTGTGCCACGGATTCTTGGGGGGTGGGTGTGGGGGGGGTGCTCTTCTCTAATTTTGGACTAAAATCTGGGTACAAAACCACCCAAAGATTGCAACTTCGTGTATATACAGCTCGAAAGTTTCGTTATGTTCCTAAAATGTCTCCCTTTTCTTCTTGGTTTGTGAAGGGATTGCAAAGGAGCTGGACGAGGACGGCAAAGGGATCGAGGCGACTGTGGCTAACACAAGCTTCCTCGGCATGAACGCCCTTCACGCACTGGGTTGGCTCGGCAAGGTGCCGGCCTACCGGTATCTGGTAGAGGAGGTCAAAATGGACGTCAACAAGGCCGACACTGCTCAGGGTAATAATCTACTCCAGTTCGCTTGCATCTTGAAAACATGTTCTTGGATATGCTTTGCTTGGCTCGACGATTTGTTCTTCCATCTTCAACTGTGTGTGCTTGTTGTTAGGATTCACACCCCTGGAGCATGCCGTCTACCATGGTCGCCTGCCTGCCACCAGATACCTCCTTGATCATGGCGCTGATGTGCATCAAATTCGCTCTACGGGAAATGTCTCTCTTCTTCACTCAGCTGCAGTAAAAGGTATCAACATAGCTTGGCCTCTGATATGCCCTTAGGATTATCCTTTTCCTGTCTTAGTTAGTTGTCTGCCAGCCCATCCTGCTAGAACATCCATGTTTTCACTGTAAGAAACTCTGCCATTCCCTTGATTTATTCTTTTGCGATGGATCCAATTTGTAGTATTGAACATTAAGCCGGAGATCCTTATGTTGAAATCAGGGAGAACTGTAAATAATAATAGAAAAATGTTTTAGTCTGATAGCTATTCAAGCCTAATTGGGAATACTAATATTGCGATTAGCTTGTGATCGCTAGATGCAAATGTTTACTGGTGCTTTTATTTTCTTTTGTAACCATAAATTGCACAAGGATGGTCTACTCTGATGTGCTTCTATCAATGTCATGTAGTCTTTTGAAAATTTTAAGATGCTTTCCAGGTTAAATAAAATCCTCTGGCCTAAGTTTCATAAAATTTCCTGTGTCATTAAATTGCTATAAGTTTTTGGAAGCAATTGTATTTACACTATCACTTGTGGGATCATCTTTTGCATGTGTTTTTTCACGCATTGCTTCACTATAGCCATTAAAATTAGTTTGCCCCCAAATGATCCTTTGCTTAGTATGATAACCACTGGTGTTTCATTATGCCAATTGGAAAATTGCTGTTTATATTTAGATGCTGAAGCTTGATTCCTCTATAACAGTTTGCCCATATATTTTTATGACCTTTGGTTTTCCACCTATTTATTCAGGGTTCTCTGAAGTAGCAAAATTTCTGCTTTCTAGAGGAGTTAATGTTGATGCAGAATCAGAAATGGGGACACCACTGGCTCTTGCTGCTTTCAAAGGATATGATAGTACTGTCAAGGTCCTTTTGGAGCACAATGCTGATGTACGATTGCTTTCATTTCTCTGTTGGCTTTCAGCATGAATCTGTTCTCCTTTGCCCCTAAGCCGTGGCCTTCGTTATTTTCTTCCCACTTGTACACAGCATCTCACAGTTAATGTGTGAGCTAACCCAGGCGTGGGAGAAGGGGCCCACACAACAGAAACTCTGATAAAGCAATAGGACAAGCATATAAAATACACTTTACAAAATAAGCTTCAGCACATTTTTTCCTTCAGAATTCTTCTTTCTTTTGGACTGTCATTACTTTGCATGACAATTGATATTCTTTGTTTTTTCCAGCCCAACAAGGTTACAAACAAGGCACTTGGTGCACCTTTAGACTTGGCATTAACCAGCTCTTCTGTGTCCTGTGTGAAGCTGTTGGTTCAGGTATAGCTCTCCCTGCTTTATATGGCCGTAGGTTTCTCTAAAGTGGTGGGTGTAGTTTACCTCTGTATAAAAGCATCAATTATAAGGAGAAACCATATGTTTGTTTATGCTGTAAACTTGAATTTAATAGGCTGGAGCTGAAGTGAAAGTTGAGGGGCCAAATAATCATTTGGTAAGAGCTGCTGAGAAAGGCTTAACTGAAGCTATTAAATGCATGTTGGAAGCTGGTGCAAACCCAAATGTTCCTGACAGGGTAAGCCTTCTCCTTTGTCACACCGGTGATATCTGCTTCAGTAGTAAACGGTTTGATACTAATTTATGAACAAATGCCACAGTATGTTCATGCATAAGTTTTTTACTGTTTCCTTTTTATTTCCTTTTGCCATGTCTTTATTAATTTGGTTAGGTATGCCTAGATATCTGTCTCATACTAGCACCACCTTGGTCTGTTCTAAAGGAAATGGATTAATAAGTTTGCTGTTTACATGATTGTCTAGGAGAGGTACCATTTCATTAAAATGGAACTAGGCTACTCTTTCATTAATCTATATTATCACTATGAAGAGCATATATCCTGAACATCAAGAAGAGCTTTTTGCTACTTGTTTTATTTCAAATTTTCAATATTTCTATTTCATTCTTCATTTGTTGGACAGCTCGGGAGAATGCCAATAGAGCTGGCTGCTGAGTATGGCACACGGGAAGATGTTGAGATTCTCTTTCCTTTCAGCTCTGCTATTCCAACTGTGGCAAATTGGAGTGTTGATGGAATAATTAATCATGTACAGTCAGAAATCAAGCAACTAGAGGTATGTACCAATTTTCTTGTGCATCTTGCAACAATCCTGGTCTTCTGTGCAATGTCGGCAGCCACTCAGTGTAAACCAATATGTTTTATGGATTAACACTATTACTTTAAAAGCAAGATTCCTGAAGCATTGCACATTTCTCTGTGGAACTTGCAAGTGAGTACCAGGAATCTGAAACAATGCATTGATTGGATCTGTTTTTTTAGCCCTTTCACTTCACCTTAACTTCTTGTTGTAATATGTTTCTTCACTGCTAGCATCAGATCTTTGAATATATGTCTAATTTTAGATATTATTTACTCAGGACGATAATTTTATCAAAAAGAGAAGGTCTGACATGAAACAACAAGGGGATGCTGCATTTAAGAAGCAGGATTATCTAAATGCATCAGTGTTCTACACTCAGGTACATTCTTCGGAACCATTCCCATGGTACATCATTGGACCATATTCCTCATTGTATATGCCGTTACTTGTGTATCTTCATCTGGCGGACACAATATGTTATTGCTACTGTGTTTCTGACTCCAGAAGACACAGGGAAAAAAAACTCTATTGGAAGATTCTTTTATGATATTTGGGATTTAACTGAAGATTGGAGGTGTTTACACTACACAATAAGAAACTAGTATTGAATTAAAACCCACCTATCGATTTGCCCAAACAGGCCTTACATGGTTCACCTTGTTTCTTTTTCTCCATGAAGTTGATCTTGTTGTTCATTTACTTTTCCAGTGCACAAAATTTGGTTGGTTATCTCATTATACTATCACACATCTCCTTGCATATTAGAGCATAAGCTGAATAGTGTGGACTGGAAACTTTTGTAGCCTGAAGCTAGCAGTAGCAGCACCCACCACCACCACCACACACACGCATGCTCTACACACAAAGCAGTCCACTGATATCTGTCTTCCATTAATCCCTTTAGTTTAATTGGGAGGAGTTGGTGGGAATTGCCCTTTTACCGAGAACTTCAATTTTACCTGGTTAGGGTGTTGGTCCAAGTCGATCAGTGCTGAGAACTGGTATAGCAATAACAGCAATAAATCTGGCACTGTTTGGTTCTTTGCAGGCACTGAAGGTTGATCCGTTTGATGGCACGTTGTTCTCAAACAGGAGTCTTTGCTGGCTCCGCATGGGTGATGGAGAAAGGGCTTTGGATGATGGCAATGCATGCGAAAAGCTACGGCCAAAGTGGGCAAAGTCCTACTATCGGCAAGGAGCAGCTCTAATGTTTCTGAAGGTGAACTAGACAAGATATGCGTTTTGACAATTCACTTGTTCCTTGTATATCTTCTACTCCTGTTTGATTTGGCTTTGCACTTGTGTTTCTTAGGAGTATGAGAGGGCTCATAGGGCACTTGGTCGAGCTTTAGAGTTGGACCCTGAAAGTGAAGAGATCGAGAATTTGTATTGGTAAGATATCTTTTTCTATCAACAAAATCTGGCTGTTGTTTTGTTCCATGTTGTAATTGGTTGCTGATCCTTACAGGGAGTCGATGGAACTGTGCGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037866