BGIOSGA009370

From RiceWiki
Revision as of 09:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009370| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009370, complete gene.| tag = OsI_144...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009370

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009370, complete gene.

LocusTag

OsI_14468

Ensembl Transcript ID

BGIOSGA009370-TA

Ensembl Protein ID

BGIOSGA009370-PA

Length

1929

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:41300903..41302831

Sequence Coding Region

41301872..41302831,41300903..41301481

Genome Context

<gbrowseImage1> name=IndicaChromosome03:41300903..41302831 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:41300903..41302831 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAAATACTTCAATGTCATCGGGGTCTGAAGGTGATCAATGCAACTATGATGACGTGGACTTCAAGCAAATAAGAGTACGAATATTGCGCACAAATGTGGTATTGGTCTTCAGTCTTATTACGGTGGCGATCCTAGTCGGAGCAAGTTCCTTCAGTCGTCGCTACCGGCGTCATGGTTTGATCCGCCTTATTTCTGTTGGAGCCTATACTCTGTTCTTGCCTCTAGTTTCCTATGTTGTCTCCGGTGTCGACAAGGAAAATTGTGCATTGCCGGATGGAATAGATGAATGCACTGATGACAGCTCCAGGTATCTGCTTGTGTGGGCAAGTGTGGTCCAAATCGTCGGAGCCAATTACTGCACTGCAATTGCGGCCGATGATAATGAACGTCAGAACATTGCTCCTATCGTGCAATTGCTTGTTGGTGCAATCTGGACATTGGTCCTCGTAATCAACCATTTCAATGAGTATTCATATGATGCTTCTAGTGTTTATTGGTTTATTTGGGTGCCATGTGCTCTCACTATTGGGAAAGTCTTGGCTAGGTTATATGCGCACGGGATGGCTCGACGATCGTTTGAAATTGGACGCAACCCTCGTCTTGTCGCTGGATACATGAGACAGTTAAATTTGCCGCGAAGAGATGATCATGCAATTCCACTATTAGTTATGGGAGAGGATAAACAAGACGTAGAGGAGGGCCCTCGTGGCTATCGATTTACAAATCACAGTGGAAACAACAGTTTGGTTACCATGGACAGAATTACAAATATGACGCCTGCCAATGAAAATGTTTTGAACTCACAATTCAAAGACGTATGCCTGTCATTCTCATTGTTCAAGCTGCTGCGACAGAGATTCGCTAGGTGCCTAGTTGTTGAGGAAGACTACGGAACTGTTCCAAACTTCACTATTAAATTACGGCATGGTGACCCTCAAGCTCAACCTCAAGGCATTAGGTCTCCTCTCATGCAAAGATTGATTTGCCGCATTCTGCGGTTCAGATGCAAGATGTTAAGCAACAGTTACAAAATGGGGCAAGCCTCCATAATGGACACCAACATGAAGGTTGTCAAAGCTGTTAGGCGTCTACTCCAACTTGCGGATGAAAAAATGAAATATGTGGAGATACAACCAGAGGTGAACACTGCAATCCTCGATAAGTTCAGAGCCAACAACTGGAGACTACCAACAGTCAATGCATCTCTGCAACAGAGCCGAATCGGTAACGATATTTTGTGGGCTTGCAATGGAAAAGGTACATCTGATGTTATTCTTGTATGGCACATTGCAACCTGTATCTTCCAGATCAAGCACCCGTATGAGGGTCCCAATGCCCCCGCTATCACTGCCTCTCAACTGTCACGATACTGTGCCTACTTGCTATCATCAGCTCCCGAACTGCTGCCTGATGACAAGGCATGGTCGAAGAAATTATATAAATCTGTCAAGAAGATCACCGAGCCAATTTTCAGCAAAAGCAATACGAGGCCTGTGCAATATGAGCACATCTTACAAAAGTTGGATGAGATTTAA</cdnaseq>

Protein Sequence

<aaseq>MTNTSMSSGSEGDQCNYDDVDFKQIRVRILRTNVVLVFSLITVAILVGASSFSRRYRRHGLIRLISVGAYTLFLPLVSYVVSGVDKENCALPDGIDECTDDSSRYLLVWASVVQIVGANYCTAIAADDNERQNIAPIVQLLVGAIWTLVLVINHFNEYSYDASSVYWFIWVPCALTIGKVLARLYAHGMARRSFEIGRNPRLVAGYMRQLNLPRRDDHAIPLLVMGEDKQDVEEGPRGYRFTNHSGNNSLVTMDRITNMTPANENVLNSQFKDVCLSFSLFKLLRQRFARCLVVEEDYGTVPNFTIKLRHGDPQAQPQGIRSPLMQRLICRILRFRCKMLSNSYKMGQASIMDTNMKVVKAVRRLLQLADEKMKYVEIQPEVNTAILDKFRANNWRLPTVNASLQQSRIGNDILWACNGKGTSDVILVWHIATCIFQIKHPYEGPNAPAITASQLSRYCAYLLSSAPELLPDDKAWSKKLYKSVKKITEPIFSKSNTRPVQYEHILQKLDEI</aaseq>

Gene Sequence

<dnaseqindica>1..960#1351..1929#ATGACAAATACTTCAATGTCATCGGGGTCTGAAGGTGATCAATGCAACTATGATGACGTGGACTTCAAGCAAATAAGAGTACGAATATTGCGCACAAATGTGGTATTGGTCTTCAGTCTTATTACGGTGGCGATCCTAGTCGGAGCAAGTTCCTTCAGTCGTCGCTACCGGCGTCATGGTTTGATCCGCCTTATTTCTGTTGGAGCCTATACTCTGTTCTTGCCTCTAGTTTCCTATGTTGTCTCCGGTGTCGACAAGGAAAATTGTGCATTGCCGGATGGAATAGATGAATGCACTGATGACAGCTCCAGGTATCTGCTTGTGTGGGCAAGTGTGGTCCAAATCGTCGGAGCCAATTACTGCACTGCAATTGCGGCCGATGATAATGAACGTCAGAACATTGCTCCTATCGTGCAATTGCTTGTTGGTGCAATCTGGACATTGGTCCTCGTAATCAACCATTTCAATGAGTATTCATATGATGCTTCTAGTGTTTATTGGTTTATTTGGGTGCCATGTGCTCTCACTATTGGGAAAGTCTTGGCTAGGTTATATGCGCACGGGATGGCTCGACGATCGTTTGAAATTGGACGCAACCCTCGTCTTGTCGCTGGATACATGAGACAGTTAAATTTGCCGCGAAGAGATGATCATGCAATTCCACTATTAGTTATGGGAGAGGATAAACAAGACGTAGAGGAGGGCCCTCGTGGCTATCGATTTACAAATCACAGTGGAAACAACAGTTTGGTTACCATGGACAGAATTACAAATATGACGCCTGCCAATGAAAATGTTTTGAACTCACAATTCAAAGACGTATGCCTGTCATTCTCATTGTTCAAGCTGCTGCGACAGAGATTCGCTAGGTGCCTAGTTGTTGAGGAAGACTACGGAACTGTTCCAAACTTCACTATTAAATTACGGCATGGTGACCCTCAAGCTCAACCTCAAGGCATTGTGAGTATGATTATAGATGAACTATCTTTTGCTTGTGACTTCCATAATGATCCATATCTTCCAATCTCCTATTCAAGTTGGTGGTTACCCATCTTAAACGTGGTATTATCATTGTTCGTTATAACATACTGCTTAGCAGGCGTGATATATCTAGTACAAGATGCAAGCACACCACCATACGATTCGTCTCAGATAACCTGTTCGTTAACATGCGATATAAACGATGAACACCCCAGAAGCTTCGGATATACTTTGGTTCTAGATGTGTTGACATCATTCCTTGCGGTAGTATTGCTGCTTTCTGAGGCATGGGAGATTATTTTCTATTCATGCTCCAATTGGACCAAAGTTAACTTGATTTGCTACTACGTCACGAAAACATCTTGGCAGAGGTCTCCTCTCATGCAAAGATTGATTTGCCGCATTCTGCGGTTCAGATGCAAGATGTTAAGCAACAGTTACAAAATGGGGCAAGCCTCCATAATGGACACCAACATGAAGGTTGTCAAAGCTGTTAGGCGTCTACTCCAACTTGCGGATGAAAAAATGAAATATGTGGAGATACAACCAGAGGTGAACACTGCAATCCTCGATAAGTTCAGAGCCAACAACTGGAGACTACCAACAGTCAATGCATCTCTGCAACAGAGCCGAATCGGTAACGATATTTTGTGGGCTTGCAATGGAAAAGGTACATCTGATGTTATTCTTGTATGGCACATTGCAACCTGTATCTTCCAGATCAAGCACCCGTATGAGGGTCCCAATGCCCCCGCTATCACTGCCTCTCAACTGTCACGATACTGTGCCTACTTGCTATCATCAGCTCCCGAACTGCTGCCTGATGACAAGGCATGGTCGAAGAAATTATATAAATCTGTCAAGAAGATCACCGAGCCAATTTTCAGCAAAAGCAATACGAGGCCTGTGCAATATGAGCACATCTTACAAAAGTTGGATGAGATTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009370