BGIOSGA009391

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Revision as of 09:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009391| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009391, complete gene.| tag = OsI_144...")
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Gene Name

BGIOSGA009391

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009391, complete gene.

LocusTag

OsI_14434

Ensembl Transcript ID

BGIOSGA009391-TA

Ensembl Protein ID

BGIOSGA009391-PA

Length

6624

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40749530..40756153

Sequence Coding Region

40756148..40756153,40755709..40755828,40755130..40755228,40754376..40754582,40753855..40753994
,40753665..40753773,40753523..40753558,40753384..40753440,40753117..40753287
,40752822..40752971,40752090..40752263,40751544..40751648,40751395..40751465
,40751222..40751321,40750762..40750785,40750473..40750529,40750291..40750371
,40750009..40750127,40749530..40749644

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40749530..40756153 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40749530..40756153 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGTCATTGTCGTTGCTACTTAGTGCTCTCAAATTACAAAAGGATGATGAAAGCCATAATAACAACTCAATGTGCATGGAGAGGAAGAGTGGCTAGAAGAGAACTTCGAGAATTGAAAGTGGCTGCAAAGGAAACTGGTGCTCTACAAGCTGCAAAGAGTAAACTAGAGAAGGAAGTTGAGGAGCTCACTTGGCGGCTACAATTGGAGAAACGCATCAGAGCGGATGTAGAAGAAGCCAAGGCACAAGAAAACAAGAAGCTCCAGTTACAATTGCAGGACTTACAAATGCAATTGAATGATACAAAAGAATTATTAAAAAGGGAAAAGGAATCTACTAAGGCGGAAATGGAGAAAACTTTGGTGCCAGAAATTTGTGTTGATACAACTCAAGTCAATGAGCTCACTGCTGAAAATAATAGGCTTAAGGCACTAGTGGTCTCTCTTGAAACAAATATTGAAGAAATGAAACAGAAGTTTGGAGAAACAGATAACGTGAGGGATGAGTGGTGCAAGAAAGCTACAGATGCAGAATCACAAATTAACGAGTTAAAAAGCATGATGCAAAGCCTTCAAGAAAAGCTGAATAGCACAGAAGCAGAAAACCATGTTCTCCGGCAGCAGGCCATGAGAACAAGACCTGATAATATGCCTTTGCTTAACATGCATCGAAAATCTAATCTGGCTAACGGTAGCCTTCCTGGTGATGAACAGACACCTCATGGAACATCAATGGAATATGGAAGGACATCCTATATTGAAAGGCAACAAGAGAGTGTTGAAGCACTGATAAATTGTGTTGTTGAAAATGTTGGATTTAGTGAAGGAAAGCCAGTTGCTGCAGTTACTATATACAAATGTCTTCTTCATTGGAGAACTTTTGAGGCAGAAAAAACAAATGTTTTTGATCGCCTTATTCAGATTTTTGGTTCTGCAATGCAGAAACAAGAAAGCAACGCTGATCTTGCATACTGGCTATCAAATTCATCATCTTTGTTGATAATACTACAAAAGAGTCTCAAACCTGTTGGCTCATCAGTAACAACCCCGCTAAAAAGAACACAGACGCAGACGTCATTTCTTGGTAGAATGGTATTTCGTGCTTCAAACATTACTGTTGACATGGATCTTGTGCGCCAAGTTGAGGCCAAGTATCCTGCATTTCTTTTTAAGCAACAACTTACAGCTTTTGTGGAAGGCTTATATGGAATGATCCGTGATAATGTGAAGAGAGATATATCTTCAGTACTCACACTTATTATTCAGACACCAAGAAGTGCCAAAGCTGGTTTATTAACAGATCAAGGTAACAATTGGCAAGCAATAGTCAATCATTTGAATGACCTCCTGAAAACCTTACAAGAAAATTGTGTCCCATCAATTTTTGCTCGGAAGATATTTACGCAAATATTCTCATTCATCAACGCTCAACTCTTCAATAGCCTTCTTGTACGCCGAGAGTGTTGTTCCTTCAGCAATGGAGAATATGTAAAACAAGGGCTGCAAGAACTGGAAGCATGGTGTACACAAGCCAAGCCAGAGTCGTACCTAACTGAGACACTAACAGTCATCTTCAAAAAGTTCAGGATTTCATACGACGAAATAATCAATGATCTGTGCACGGCACTGAGTGTTCAACAACTTTACAAAATATGCACGCAGTACTGGGATGACAAATATAATACTGAAAGTGTATCGGAAGAGGTCCTAAATGAGATGAAAACATTGATGAATGGAAAGGATGCTTCGGATGGTACCTTGAAATCATTGATGAATGAAAAGGATGCTTCGGATGGTACCTTTTTATTAAATGAGGAGATAAGCATGCCGTTATCATTGGAGGAGATAGGCGATTCAATGGATGCCAAGGAATTTCAGAATGTGGTTCCACCTCAACAACTCCTTGACAACCCCGCGTTCCAATTCTTGAAGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MASHCRCYLVLSNYKRMMKAIITTQCAWRGRVARRELRELKVAAKETGALQAAKSKLEKEVEELTWRLQLEKRIRADVEEAKAQENKKLQLQLQDLQMQLNDTKELLKREKESTKAEMEKTLVPEICVDTTQVNELTAENNRLKALVVSLETNIEEMKQKFGETDNVRDEWCKKATDAESQINELKSMMQSLQEKLNSTEAENHVLRQQAMRTRPDNMPLLNMHRKSNLANGSLPGDEQTPHGTSMEYGRTSYIERQQESVEALINCVVENVGFSEGKPVAAVTIYKCLLHWRTFEAEKTNVFDRLIQIFGSAMQKQESNADLAYWLSNSSSLLIILQKSLKPVGSSVTTPLKRTQTQTSFLGRMVFRASNITVDMDLVRQVEAKYPAFLFKQQLTAFVEGLYGMIRDNVKRDISSVLTLIIQTPRSAKAGLLTDQGNNWQAIVNHLNDLLKTLQENCVPSIFARKIFTQIFSFINAQLFNSLLVRRECCSFSNGEYVKQGLQELEAWCTQAKPESYLTETLTVIFKKFRISYDEIINDLCTALSVQQLYKICTQYWDDKYNTESVSEEVLNEMKTLMNGKDASDGTLKSLMNEKDASDGTFLLNEEISMPLSLEEIGDSMDAKEFQNVVPPQQLLDNPAFQFLKS</aaseq>

Gene Sequence

<dnaseqindica>1..6#326..445#926..1024#1572..1778#2160..2299#2381..2489#2596..2631#2714..2770#2867..3037#3183..3332#3891..4064#4506..4610#4689..4759#4833..4932#5369..5392#5625..5681#5783..5863#6027..6145#6510..6624#ATGGCGGTATGAAATTATGCGTAGAGAGACAGCTTCATTGAAAATTCAGACATGCTACCGTAAACACTGTGCAAGGAAAACATATAAAGAGATTTGTTCCGCGTCAACTACTATCCAATCTGGTTTACGTGGTATGGCTGCTAGACACAAACTCCATTTCTATCGGCAAACAAAAGCTGCAGTTATTATTCAGGTATTTACAAGGTTTTACTTTAGTCAGCTATCGTGATTATTTTTTCTCATTTTAAGGTTTTAATTTTAACTCCATAAAATTAGATAATTATGAGTCAATAAATTACTCATTTAATGATGTCATCCCTTGCAGAGTCATTGTCGTTGCTACTTAGTGCTCTCAAATTACAAAAGGATGATGAAAGCCATAATAACAACTCAATGTGCATGGAGAGGAAGAGTGGCTAGAAGAGAACTTCGAGAATTGAAAGTGGTAAGAGCAATTACTTTCTCCATTCTCCCTTTCCCCTAGGCATCAGGCTACAACATTAGAAACTTTTGTTTTGCAAACTCCAGTGTAGCTTGTCATCAATCTTTCTATTTTTTTTTCATTATATAGTTCTTGTTGTTTTATTTCTTCTTAATATTAAATCTTCTCTATTTTTTTATTCAGTGCATGTCTTAGTGTTAATGTGGTAAGCGCACTACGAGATACTACTGGAATAAAAGAAGTATGCTAGTTATATGTAGAAAGGAACTTAACAGTACCGGCAATGCTGCTACAAACTCATTATGTAACCTAGTTTGCATCTTTCATAGTTTCTATCAATATTTTTGCACAAGCACTCTTTTTCTGCCTTCCTAGAATTGAACGAAGAGTAATGCAATTTGACTCCTTTTATGCCTTCCTAGTCTAAAAATCAATATCCAATTTGATTTTTGGTGTGACTTGCCACTTTTGCATTGCTTTCAGGCTGCAAAGGAAACTGGTGCTCTACAAGCTGCAAAGAGTAAACTAGAGAAGGAAGTTGAGGAGCTCACTTGGCGGCTACAATTGGAGAAACGCATCAGAGTAAACTAGTGCACTAAACACATGCACTCTTTTCCATTAAGTTATCTTTATTTATAGTGCAAATGCATATAGAAGTGACATGATATTTCCTATCTTTTACTACAAGCAAAGTTATCCATCAATAAAGAATTATCATTTAAATGGTGTGATATCTCTAAGGCACGCTTTGACCTAACTTTACATACCAACAAATACGTTATGTCTATTTGCAGTATGCCTCTATTATTATATGTGCTACATATAATATTGATTACACTTGTCCATTTATAGTAAGTTGTCTCCAGTGAAAAAAAAAGATGGTATTTACTTTAATTACGAAAAGAGCATAGTCCCATTGTTGTTTGAACTAACCAACGTCAAACAAATAAAAATGGATGGAGACACAAGAAGTGGAAAGATAGTTTGGCAGCAAGAAGAATACTGATAGTTTGGCAGCAAGAAGAATACTAATGCTAGTATGATAGCAAAGTATCAGGCATTGCATAACACCACAAAATGAAATTTCGATGATTATGTAATTCCTATGCTTTTTTATTCATATTTGCAGGCGGATGTAGAAGAAGCCAAGGCACAAGAAAACAAGAAGCTCCAGTTACAATTGCAGGACTTACAAATGCAATTGAATGATACAAAAGAATTATTAAAAAGGGAAAAGGAATCTACTAAGGCGGAAATGGAGAAAACTTTGGTGCCAGAAATTTGTGTTGATACAACTCAAGTCAATGAGCTCACTGCTGAAAATAATAGGCTTAAGGTACTATAAATACGAACAAATAAAGTGGTGAAAAATTAATGAAAATCACCATGGACAATTACCATTTGCACATCCTTTTGTTTTATCTATGCAACTCATAGTTATAATGATATCTTCTAGACTTTTTTAATGATCCACGAATAATACAATGACCACAAATAAAATTAGTATTTCTTAGATTGTCTCCCATTCACGAGAGTAATATAATAATGTGTAATGCGAATATATTGTGTGAAACTAATCTAGTAACTTCAATATTCATTGTAACATAATTGTTATTTTAGCAAGATTAAGCTAACGTTGTTTGCTACATGACAATCCCTATACTATGCCTAACATGAATATCTCCAATGGAATTACAACATGGCACTCTTAATACAGGCACTAGTGGTCTCTCTTGAAACAAATATTGAAGAAATGAAACAGAAGTTTGGAGAAACAGATAACGTGAGGGATGAGTGGTGCAAGAAAGCTACAGATGCAGAATCACAAATTAACGAGTTAAAAAGCATGATGCAAAGGTTCTTATTTCACGTTGATAGAACTTATATCCGTCATTAACCTCTCTGACGTTACATGATTATATTGATGGTTCTATGCAGCCTTCAAGAAAAGCTGAATAGCACAGAAGCAGAAAACCATGTTCTCCGGCAGCAGGCCATGAGAACAAGACCTGATAATATGCCTTTGCTTAACATGCATCGAAAATCTGTAATCCCCCTGACCTACACCCCTTCTTCCTCTAAATGTTTCATTTTAGTAGTGAAATGTGCTTGTCATGTTCACATTCTTATGGTTCTGAGCATTTGTACTGCAGAATCTGGCTAACGGTAGCCTTCCTGGTGATGAACAGGTATGGAACATTATTCTTATTTTGGGAATTAGTAACTCGGATTTACTTTTCATGTTTGAAACTAGTGGACTCATCTCTCCAGACACCTCATGGAACATCAATGGAATATGGAAGGACATCCTATATTGAAAGGCAACAAGTATGTACATGTGACTATTATTCAATGTTTAAAAGCATCTAGTATAATCACAAGATAATAAAATACCTTATGACTAGTTCTACCTTTTCCTTACAGGAGAGTGTTGAAGCACTGATAAATTGTGTTGTTGAAAATGTTGGATTTAGTGAAGGAAAGCCAGTTGCTGCAGTTACTATATACAAATGTCTTCTTCATTGGAGAACTTTTGAGGCAGAAAAAACAAATGTTTTTGATCGCCTTATTCAGATTTTTGGTTCTGCAATGCAGGTATTTCTAAGCTCTTGCTAGGGCTCCAAGCCTTATTCTTTGTGTTCTTATTTTACCATTTATTTTGTTACCTTAAGCCAAGTTACCTTTTCATGTTTGTTCATTGCACTCAATTTCTATTGTCTTCATACCACGTGTATTACAGAAACAAGAAAGCAACGCTGATCTTGCATACTGGCTATCAAATTCATCATCTTTGTTGATAATACTACAAAAGAGTCTCAAACCTGTTGGCTCATCAGTAACAACCCCGCTAAAAAGAACACAGACGCAGACGTCATTTCTTGGTAGAATGGTATGTCGTATTATGTTATTTGATGATTTATTTAGAACTTTAGATGATTAAATTATCTTTTTTCCCTTGGCACGCAAGTGATTTGACATTTGTTCATGAATCTTGTGGCACTTCCTTGATTCTATGATTGCCACATAAATGATCATTAGATTTTGCCCCAACTAACCACTATGGTCTCTGTCCAAGTTTCACATTAACTCCAAGTTGCATCTTTGACATTGATTTCAAACAAAAGGGTATACCTATATAAGATAATTAAACAATCATGACGACACATATCTACTCATAATCTTTGTATGATAAAGTTAGGTATTTAAAAACATAAAAAATGGTCAGATAAAAAACTCTGGCCACATGCTTCCTTTGATAACAATTGTTTATGATTCAGAAATAGGGTTGAATTTCAGCAGAACTAATATGATACAAGATTGTTTTTTAACTGTATGTCAACTAATATCTGCTCAAGTTAGTTTCAAAAGATTTAATAAGGGTTGTAGGATGGGGTATTTGGAAGTTATCTTGACTCTTTTATTCCCAATGGTTTTATATGATCCTCAGGTATTTCGTGCTTCAAACATTACTGTTGACATGGATCTTGTGCGCCAAGTTGAGGCCAAGTATCCTGCATTTCTTTTTAAGCAACAACTTACAGCTTTTGTGGAAGGCTTATATGGAATGATCCGTGATAATGTGAAGAGAGATATATCTTCAGTACTCACACTTATTATTCAGGTTACCCCATCTATCACGAGTCATCCGCAGGTTAAAAATTATTTCGTATTTTAAACATTTTTTGTGGTACCATTATGGGTCTGAGAATAAGTATACTTCTTTGGAATCTTGATGTGCAAGCTAGCATTGCAAGTTGAGAACTAGAGTACTAAGATGATTTTAGGTCGATCAAATTTGTCTTGTTCCCCTTAGTTAGTAGAACGCTTGAACCCTTTGCACGCAAAGTTTGAAGAAAATTATAATGTCGTTATATGATGTGCACTATTGTGCACTTGTGCTTTGAGTTTTTCTTGGTTATTGATTAGGTTGTCATATAGATTTTGAAGCTTCATGATAGTTGTATACCCTTTTTCTCGACGAGTGTTAATTATATATCTAAACTTAATGTCAAGCAGTTATTTATGTTCCTAGTCTAATGTCGATTCTTGTATGATATTGAAGACACCAAGAAGTGCCAAAGCTGGTTTATTAACAGATCAAGGTAACAATTGGCAAGCAATAGTCAATCATTTGAATGACCTCCTGAAAACCTTACAAGAAAATTGTGTAAGTGTTAATGTGCATATCGGAATTGCATTTGGTTACGTTGTATGTTGATTTTTGATCACTGTGCTGAAATTTCAGGTCCCATCAATTTTTGCTCGGAAGATATTTACGCAAATATTCTCATTCATCAACGCTCAACTCTTCAATAGGTGATTTACTGCTGTCTGGATTTTTAATTCCCTTTTCCAAATGTTTTCTCATTTTCCTGGCACTATGTTCTAGCCTTCTTGTACGCCGAGAGTGTTGTTCCTTCAGCAATGGAGAATATGTAAAACAAGGGCTGCAAGAACTGGAAGCATGGTGTACACAAGCCAAGCCAGAGGTAAGCAAAAACATGTTATTTTGCTAGTATTCTTTTTCAAGATACACACTTTGTGGTATGACATTCTTCTCATGTACTTTGTTTAAATGCCATCAACTATATAATTCATACATGAAAGAATTGTGCATGTATTGTTTGACATATTGTATTAGGGGTGATCATAATTACCAAACATCGAACCTAATTGATCTGAACCAATACCGAACTTAACTGAAAACCAAGCAAAAAAAAAACAATGAAATAATTCGGTTTTTTTTCTAAAATTTGGTTTTCGAATTACATCATCACCAGTTCACTAATGTCTTGTATGACCTTTACATTTTATCTATTTAAGAAAGCATCATATGGATTCAACACTATCTGTTAGTATAAAAATTATTCCATATTACAATCATATTGTGTTGTTAGTATCTTTTCAGTTTTTTTCCTTGTGCAGTCGTACCTAACTGAGACACTAACAGTATGCAGGATCTGCGTGGGATGAACTTAAGCATATAAGCCAGGCTGTTGGTTTCTTGGTATGTAACTCCAAACTTTAAACATGTGGGGCGTTATTAATTACTATTATATATGTGAAAAAAATAAAACTGATGTAATGTATGGCTGATTTTGAATGATGTACACATGATCTTTCATAGACAAAACTACCTTCTTACATGGGGTTTCTTGTTGTATTTTGTGGTGCGCTATAGGTCATCTTCAAAAAGTTCAGGATTTCATACGACGAAATAATCAATGATCTGTGCACGGTAAGACCGCCCCTCCCTCCAAACTCTCACATGAAAAAAAGAAAAGAAAGGGGAAGTAGGTGAAGATGAAATTAAACCCATTGGCATTATTATATATGCAGGCACTGAGTGTTCAACAACTTTACAAAATATGCACGCAGTACTGGGATGACAAATATAATACTGAAAGTGTATCGGAAGAGGTGAGCAGTAGATGCAACTAATTAATATAATGCATGCCGGTTGAGTACTTGAGTTACCCTTTGCAAAACGATTCAAGATGAAGGAATAAGACGTGCATGAAGGTAGTCGTTGGTGTATTGAAAATATTTTGACGAGCATCGATGCTTGGTTGATTGTACATAGGTCCTAAATGAGATGAAAACATTGATGAATGGAAAGGATGCTTCGGATGGTACCTTGAAATCATTGATGAATGAAAAGGATGCTTCGGATGGTACCTTTTTATTAAATGAGGAGATAAGGTACGTACTCAAATATAACATATAGCTAGAGTTTTACTAGTACTACCTTCGTTTTCTAATACAGGATGTCATTAACTTTTTTTAAAACGTTTGATTATTTGTCTTATTCAATTTTTTTTTGCAAATATAAGAAAATTTAAGTCATGGTTAAAGAACATTTGACAATAAATCAAGTCACAATAAAATAAATGAAAATTACATGTTTTTTTTCAATAAGACAGAATAGCCAAACATATATTTAAAAACTCAACAGATATATTAAATAACGGAGGGAGTTCTATTTTGTTGTGTTTTGTCCGTGCTGAAAATGAAAAGTGGATCGAAGGAGGTTGAATTAATTAGTTTGGAGATTATTAACATGCAGCATGCCGTTATCATTGGAGGAGATAGGCGATTCAATGGATGCCAAGGAATTTCAGAATGTGGTTCCACCTCAACAACTCCTTGACAACCCCGCGTTCCAATTCTTGAAGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009391