BGIOSGA009395

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Revision as of 09:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009395| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009395, complete gene.| tag = OS03G08...")
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Gene Name

BGIOSGA009395

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009395, complete gene.

LocusTag

OS03G0859500

Ensembl Transcript ID

BGIOSGA009395-TA

Ensembl Protein ID

BGIOSGA009395-PA

Length

4589

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40705262..40709850

Sequence Coding Region

40709326..40709850,40708568..40708854,40708124..40708295,40707431..40707544,40707185..40707313
,40706474..40706665,40706312..40706398,40705830..40706102,40705631..40705738
,40705396..40705515,40705262..40705294

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40705262..40709850 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40705262..40709850 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCCGTACCGGTCATCGTCTTCGTCGGCGAGCAGCCCCGCCGCCGCCCTCGCCATGGGCCGCCGCCATTACTACCTGCCCGCCAGGCCCGCGCGACCCATCTCCTTCGAGGACTCCCCCGACTGGGCCGACGACGACGTCGACTCCATCCACCTCGCAACCGCATCGGCGTCGGCGTCCCTTCCCACCACCGCTTACCCCTCTCCGAGTCCGACGCCCTCCTCCTCCTCCGCCGCCTGCAGAGGAGGAGAGCGCAAGGTGGCCGGTGCCACCCTGGTGTGGAAGGAGCTCAGCGTCTCCCTCACTCGCTCACGCTCAGGCTCAGGCTCAGCTGACCGCCGCGTCGTCAAGAGCTCCACCGGCTACGCGCTCCCAGGCACCCTCACCGTCATCATGGGCCCCGCCCGCTCCGGCAAATCCACTCTTCTCCGGGCAATCGCTGGCCGCCTGCGCCCCGCCGAGCGGATGTACGGCCAAGTCTTGCTCAACGCCACCAACACACGCTTGCCTTATGGATCTTATGGTTTTGTTGATCGACACGATGTGCTAATCGACTCTCTCACAGTACGGGAGATGCTATACTACTCCGCGCACTTGCAGCTTCCGGGCCTATTCTCCTCAAAGACCTCCATAGTCGAAGATGCTATCGCAGCCATGTCCTTAGCTGACTATGCTGACAACCTCATTGGTGGCCACTGTTTTATCAACAGCCTCCCAGCTGGAGAACGGAGGCGCCTCAGCATTGCAAGAGAGCTAGTGATGAGACCACACGTTCTGTTTATCGACGAGCCTCTCTATCATCTTGACAGTGTTTCTGCACTTCTACTGATGGTAACATTGAAGAAACTTGCGAGCACAGGATGCACAGTCATCTTCACAATGTATCAGAGCAGTACAGAAGTTTTTGGACTTTTCGATCGAATCTGCTTGCTTTCAAATGGGAATACACTCTTTTTTGGAGAAACATTGTCTTGCCTACAGCACTTCTCAAATGCTGGCTTTCCATGTCCAATCATGCAAAGTCCATCTGATCACTTCTTGCGGGCAATCAATACTGATTTTGACAGAATCATAGCCATGTGCAAAAATTTGCAGGATGATCAAGGGGACTTTTCATCAGTGAGCATGGACACAGCTGTGGCAATCCGTACGCTGGAAGCAACATACAAGTCATCAGCTGACTCTGTTGCTGTTGAATCACTGGTTGCGAAATTGATGGAGAAGGAAGGTCCTCACTTGAAAAGTAAAGGCAGAGCCAGTAATACAACACGAATCGGTGTTCTCACCTGGAGATCATTGGTAATAATGTCAAGAAATCGGAAATATTTCTGGAGCAGATTTGCCTTGTATATGCTTCTTGCCCTCTCAGTCGGCACCATATTTAACAACGCTGGTCATTCATTATCATCTGTAATGGTAAGGGTTTCTGCAATATTTGTGTATGTATCATTTGTCATCCTTCTAAGTGTTTCTGGAGTTCCTGCCCATATTGATGAGATCAAGATATATTCCCATGAGGAAGCGAATCAGCATTCGAGTACAATGGTTTTCCTGCTAGGGCACTTCCTGTCCAGTATTCCGTTTCTATTTCTGGTCACTATTTCGTCATCGCTGGTTTTCTACTTCCTGATAGGACTCAGGAATGAGTTCAACTTGTTTATGTATTTTGTGGTGACCATGTTCATGTGCCTGTTGGCAAATGAGGCACTTATGATGATTGTTGCTTACATCTGGCTCGACACTTACAAGTGCACCTTAACTCTCATTTGCTTATACGTTATCATGATGCTTGTGGGTGGATATTTTCGAATCCGAGGGGGTCTACCGTGCACAGTATGGAAGTACCCATTGTCGTACGTTTCGTTCCATGTGTATGCAGTTGAGGGTTTGCTTGAGAACGAGTATGTGGGCACATCGTTTGCGGTCGGTGCGATAAGGACGATACCAGGTGTCCAAGCAGTTGGGGGCTCATACGACATCTCGTCTTCAGCAAACGCAAAGTGGCTGGTGCTGCTGGAGCTGGACACCGCAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDPYRSSSSSASSPAAALAMGRRHYYLPARPARPISFEDSPDWADDDVDSIHLATASASASLPTTAYPSPSPTPSSSSAACRGGERKVAGATLVWKELSVSLTRSRSGSGSADRRVVKSSTGYALPGTLTVIMGPARSGKSTLLRAIAGRLRPAERMYGQVLLNATNTRLPYGSYGFVDRHDVLIDSLTVREMLYYSAHLQLPGLFSSKTSIVEDAIAAMSLADYADNLIGGHCFINSLPAGERRRLSIARELVMRPHVLFIDEPLYHLDSVSALLLMVTLKKLASTGCTVIFTMYQSSTEVFGLFDRICLLSNGNTLFFGETLSCLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNLQDDQGDFSSVSMDTAVAIRTLEATYKSSADSVAVESLVAKLMEKEGPHLKSKGRASNTTRIGVLTWRSLVIMSRNRKYFWSRFALYMLLALSVGTIFNNAGHSLSSVMVRVSAIFVYVSFVILLSVSGVPAHIDEIKIYSHEEANQHSSTMVFLLGHFLSSIPFLFLVTISSSLVFYFLIGLRNEFNLFMYFVVTMFMCLLANEALMMIVAYIWLDTYKCTLTLICLYVIMMLVGGYFRIRGGLPCTVWKYPLSYVSFHVYAVEGLLENEYVGTSFAVGAIRTIPGVQAVGGSYDISSSANAKWLVLLELDTAK</aaseq>

Gene Sequence

<dnaseqindica>1..525#997..1283#1556..1727#2307..2420#2538..2666#3186..3377#3453..3539#3749..4021#4113..4220#4336..4455#4557..4589#ATGGACCCGTACCGGTCATCGTCTTCGTCGGCGAGCAGCCCCGCCGCCGCCCTCGCCATGGGCCGCCGCCATTACTACCTGCCCGCCAGGCCCGCGCGACCCATCTCCTTCGAGGACTCCCCCGACTGGGCCGACGACGACGTCGACTCCATCCACCTCGCAACCGCATCGGCGTCGGCGTCCCTTCCCACCACCGCTTACCCCTCTCCGAGTCCGACGCCCTCCTCCTCCTCCGCCGCCTGCAGAGGAGGAGAGCGCAAGGTGGCCGGTGCCACCCTGGTGTGGAAGGAGCTCAGCGTCTCCCTCACTCGCTCACGCTCAGGCTCAGGCTCAGCTGACCGCCGCGTCGTCAAGAGCTCCACCGGCTACGCGCTCCCAGGCACCCTCACCGTCATCATGGGCCCCGCCCGCTCCGGCAAATCCACTCTTCTCCGGGCAATCGCTGGCCGCCTGCGCCCCGCCGAGCGGATGTACGGCCAAGTCTTGCTCAACGCCACCAACACACGCTTGCCTTATGGATCTTATGTATGTTATATATGCGCCCCCTTCTTTATGCTATTTCAATTCCATCCATATATCTTTGCTTCATATTTAATTTCTTCCTTGTTTTTTACTAAGCCTTGTTTAGTTGGAGAAAATTGTTGTCACATCGGATATACGGACACACATTTGAAGTATTAAATATAGTCTAATTACAAAACAAATTACAGATTCCGCCAGGAAACTACGAGACGAATTTATTAAGTCTAATTAATCCATCATTAACAAATGTTTACTGCAGCATCACATTGTCAAATCATGGCACAATTAGGCTTAAAATATTCGTCTCGCGATTTACACGCAATCTGTGTAATTGTTTTTTTACCTACATTTAATACTTCATACATGTGTTAAACATTCGATGCGACAGTGTGAAAATTTTTGTTTTGCGAACTAAACAGGGCCTAAATTAAATTAATTACATGGCTTTTTATGCCTTCTGTTGGAGACTTGCAGGGTTTTGTTGATCGACACGATGTGCTAATCGACTCTCTCACAGTACGGGAGATGCTATACTACTCCGCGCACTTGCAGCTTCCGGGCCTATTCTCCTCAAAGACCTCCATAGTCGAAGATGCTATCGCAGCCATGTCCTTAGCTGACTATGCTGACAACCTCATTGGTGGCCACTGTTTTATCAACAGCCTCCCAGCTGGAGAACGGAGGCGCCTCAGCATTGCAAGAGAGCTAGTGATGAGACCACACGTTCTGTTTATCGACGAGCCTCTCTATCATCTTGACAGGTTTGTTTCATTGCCATTCCATAGGGATCAAAGTAACTATTGCTGCTTTCTCTCCTCTCATATCTTTGTATATCACAATCCCAGGAAAAAATTTGCCAGCTTCAACTATTTCTGTATGCATGAGAATGTTTGACTTTCACATGCACGCTAATATGACAATCAGTACAATCCTATTTGATAGATTAGTAGATCCAGCAGTCATATGTGGATGCTGTCTTTGCATATGTACAGAGTTAAAAAGCGCAACCCTGTTCTTTTTTCTTTTGCTGCAGTGTTTCTGCACTTCTACTGATGGTAACATTGAAGAAACTTGCGAGCACAGGATGCACAGTCATCTTCACAATGTATCAGAGCAGTACAGAAGTTTTTGGACTTTTCGATCGAATCTGCTTGCTTTCAAATGGGAATACACTCTTTTTTGGAGAAACATTGTCTTGCCTACAGGTATCTTTTTGTACATTTTACATGCATTCCCATTTTAGCACTTGGTTGGAATTACAATATTCTGTTGGGAGTGTTCTCAGTATGGCTGTCACCTTGATGTAATTCAGTAATTGTCTCGTATCAATAGAAGCTTCCTTTTATCTAAGAAAGGTATTGTTTGGATTAGAACTATTGAGTTCTGTAGTTTGGATATGTCGGTCATGAAAGTTGCTCTAAAATTACATGGCTAGTTTTTGTAGAGGAATTTACAGGACTAATTAGTTCAGTACTTGAGCATGATTGTGTTTACTGGAGGACACTAAATCAGAAACCCATGCCAGGCTCCAAGTAACATTGGTAGTAAGTAATCAAAGAGTCCTGTGCAAAATAAACTGTACTAGTTAGTAACAAGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTTTCCTTAATACAATGATGCGCTGCTTGTGTATTCCCAAATTTTTTTTTTCCTGATTTGTTTGTCGTACTCTCATCCGATGCCTTGTGCACAATTCTTGTTTTGCCTTTTCCTGTTGCAGCACTTCTCAAATGCTGGCTTTCCATGTCCAATCATGCAAAGTCCATCTGATCACTTCTTGCGGGCAATCAATACTGATTTTGACAGAATCATAGCCATGTGCAAAAATTTGCAGGTATCTAATAGACCCATCTTGACATGAGATTTCATTTTTATTTCCGACCCGTTACTCAAGTCAATGCAGAAATATTCTTTTGTAGTAAGAGATAAAAACCTTTGTAGTTACTAACAGGATGATCAAGGGGACTTTTCATCAGTGAGCATGGACACAGCTGTGGCAATCCGTACGCTGGAAGCAACATACAAGTCATCAGCTGACTCTGTTGCTGTTGAATCACTGGTTGCGAAATTGATGGAGAAGGTACCTGTTGCTAACACACTAGAAAAGGAAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATGGAGAAATATCATTATGCATCCAACACATTATGCGCATTAATATATATATTTATATATTGATGCATTGAAGTCGCCTTCTTCCATATACTCTAATTAAGTAATTGTTTGGCCAGTTGGCACAGCCACAAAGATTGTTGCACATCTTTCTGGATGTTGTTATAATGGTTTACAACCTGATGCTCCTGTTCCCTTTGGAGAATTTTGGTTGTGCTCCAGCCTCCAATCAAGACACAGCTAGCAACAGGGAATACGGCAACCTGGTTGTCCTGGTGTAATCTAAACCACACTAATTATGGGGGCCTTAAAATCCAGTACAATATAGTTTAGGATAGTTAGTACTACTACCCAGTATTGCAGTGCACATATAATTGATGTTGTGTGGTTTTACATTAATCCGTCCCCTTCTTTTTTCTTACATGATGTGCTGCAGGAAGGTCCTCACTTGAAAAGTAAAGGCAGAGCCAGTAATACAACACGAATCGGTGTTCTCACCTGGAGATCATTGGTAATAATGTCAAGAAATCGGAAATATTTCTGGAGCAGATTTGCCTTGTATATGCTTCTTGCCCTCTCAGTCGGCACCATATTTAACAACGCTGGTCATTCATTATCATCTGTAATGGTTAGTACCATTACTCTGTTGCGTTTGAATCTATTAAATGTATGATATGATGATAAGACTACGTTGTTTCAACAGGTAAGGGTTTCTGCAATATTTGTGTATGTATCATTTGTCATCCTTCTAAGTGTTTCTGGAGTTCCTGCCCATATTGATGAGATCAAGGTGAAAGTTTTGGTCTTTACCACTTCATTCTTATTTGTGTTCTTTATTGTTAACAGAGTAATTCTTTTTTTTTTTAATACTGAGACATAGTCCTACTGTTACTTATGATATATAGTACACAACTACACATTAACAAAAGAAAAGGTACTAGGTTTGTCCAGGCACTACAATCTATTATATCGCAAATTGTTTTCATCCTATATATGCAGATATATTCCCATGAGGAAGCGAATCAGCATTCGAGTACAATGGTTTTCCTGCTAGGGCACTTCCTGTCCAGTATTCCGTTTCTATTTCTGGTCACTATTTCGTCATCGCTGGTTTTCTACTTCCTGATAGGACTCAGGAATGAGTTCAACTTGTTTATGTATTTTGTGGTGACCATGTTCATGTGCCTGTTGGCAAATGAGGCACTTATGATGATTGTTGCTTACATCTGGCTCGACACTTACAAGTGCACCTTAACTCTCATTTGCTTATACGTAAGCCTACCTTTTGCTCGTCATTTTAAGAAGAAATAGTATGTGTCAGTTGGATCAATGTTGAATAACAATACTTGTGCCATTGATTCAGGTTATCATGATGCTTGTGGGTGGATATTTTCGAATCCGAGGGGGTCTACCGTGCACAGTATGGAAGTACCCATTGTCGTACGTTTCGTTCCATGTGTATGCAGTTGAGGTAATAAGTGGGGAAATTTCTTTCTTTGTACTAGTAATAAGTATAATGGATGATTGGGGTTGGGAAACATATAGGGAGAGCGAGTGATAATAACAATAGTGGTGCGTGGGTGCAGGGTTTGCTTGAGAACGAGTATGTGGGCACATCGTTTGCGGTCGGTGCGATAAGGACGATACCAGGTGTCCAAGCAGTTGGGGGCTCATACGACATCTCGTCTTCAGCAAACGCAAAGTGGGTAAATCTGCTGGTTTTGTTTGTGACGGCAGTTGGATACCGTGTTGTTCTCTACGTGTTGCTTCGTCTGAATGTAAGGAAACACATGAGGTTGCTTGGCAGCTGGTGCTGCTGGAGCTGGACACCGCAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009395