BGIOSGA009408

From RiceWiki
Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009408| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009408, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009408

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009408, complete gene.

LocusTag

OSJNBA0059G06.17

Ensembl Transcript ID

BGIOSGA009408-TA

Ensembl Protein ID

BGIOSGA009408-PA

Length

1988

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40611781..40613768

Sequence Coding Region

40613360..40613768,40613173..40613273,40612968..40613024,40612633..40612709,40612396..40612444
,40612195..40612305,40611987..40612084,40611781..40611847

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40611781..40613768 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40611781..40613768 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGAGGCGTGGCTGTCGCCGGCTTCCCGCCTCTTCCACCCTCCCCGCTCCTCCACCGCCGCCTTCTTCTCCGCTTCCGGGCTCCCCCGCCTGCCTCGCCGCTCCTCCTGTGCACTCGCAACCTCCACGCGTGGGCGGCGCCTCCGCCTTGGCGCCACCGATCAGCAGCAGCAGCAAGGCAAACAAGATGGTGATGAGGTTGTGGACAGCAACGTGCTCCAGTACTGCAGCATCGACGGGAAGGGGAAGAAGGCCGAGAAGAGGTCGCTGGGTGAGATGGAGCAGGAGTTCCTTCAGGCTCTTCAGGCCTTCTACTACGACCAGAAGGCCATCATGTCCAACGAGGAGTTCGACAACCTCAAGGAGGAGCTCATGTGGGAAGGCAGCAGCGTTGTCATGCTAAGCCCTGACGAACAACGCCTGCTCGAAGCCTCCATGGCCTATGCTGCCGGCAACCCCATCATGTCTGACGCTGAATTCGACCAACTCAAACTCAGATTGAAGAAAGACGGAAGTGACATTGTCACCGAAGGTCCCAGGTGCAGTCTACGCAGCCGAAAGGTGTACAGTGATTTGACCGTTGACTACCTAAAGATGTTCCTGCTAAATGTTCCAGCAACTACTCTTGCTCTAGGACTGTTCTTCTTCATCGATGAGTTGACTGGCTTTGAGATCAACATATTCCAGCTGCCAGAGCCTTTCGGTTTCATTTTCACATGGTTTGCTGCTTTGCCTCTAATATTGTTCATAGCACAGTCGATAACTAATGCCATAGTGAACGACTTCTTAATCCTCAAGGGGCCATGTCCGAATTGTGGCGCTGAAAACCTTTCCTTCTTCGGGACTATCCTGTCAGTGTCTAGTGGCGGTGAAACAAACAAAGTGAAATGTGCAGATTGTAGCACGGAGATGGTATATGACTCGAAATCTCGGCTCATCACCCTTCCAGAACCATCGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MASEAWLSPASRLFHPPRSSTAAFFSASGLPRLPRRSSCALATSTRGRRLRLGATDQQQQQGKQDGDEVVDSNVLQYCSIDGKGKKAEKRSLGEMEQEFLQALQAFYYDQKAIMSNEEFDNLKEELMWEGSSVVMLSPDEQRLLEASMAYAAGNPIMSDAEFDQLKLRLKKDGSDIVTEGPRCSLRSRKVYSDLTVDYLKMFLLNVPATTLALGLFFFIDELTGFEINIFQLPEPFGFIFTWFAALPLILFIAQSITNAIVNDFLILKGPCPNCGAENLSFFGTILSVSSGGETNKVKCADCSTEMVYDSKSRLITLPEPSQ</aaseq>

Gene Sequence

<dnaseqindica>1..409#496..596#745..801#1060..1136#1325..1373#1464..1574#1685..1782#1922..1988#ATGGCCTCCGAGGCGTGGCTGTCGCCGGCTTCCCGCCTCTTCCACCCTCCCCGCTCCTCCACCGCCGCCTTCTTCTCCGCTTCCGGGCTCCCCCGCCTGCCTCGCCGCTCCTCCTGTGCACTCGCAACCTCCACGCGTGGGCGGCGCCTCCGCCTTGGCGCCACCGATCAGCAGCAGCAGCAAGGCAAACAAGATGGTGATGAGGTTGTGGACAGCAACGTGCTCCAGTACTGCAGCATCGACGGGAAGGGGAAGAAGGCCGAGAAGAGGTCGCTGGGTGAGATGGAGCAGGAGTTCCTTCAGGCTCTTCAGGCCTTCTACTACGACCAGAAGGCCATCATGTCCAACGAGGAGTTCGACAACCTCAAGGAGGAGCTCATGTGGGAAGGCAGCAGCGTTGTCATGCTAAGTAAGTACTACTCCTTCCATCTCTTCTGCGGATACCTATCTGTTAGTATCTTCTTTGCCCACTAATTAACACTAATATCTTTTCAGGCCCTGACGAACAACGCCTGCTCGAAGCCTCCATGGCCTATGCTGCCGGCAACCCCATCATGTCTGACGCTGAATTCGACCAACTCAAACTCAGATTGAAGGTCGCTTAATTCAACTAACTAATTCCTTCCTTCCATGCTACTCTTACTGCTACTGCTACTGTACTCTCACTAAAATATTTACCAGTACTAGCTGCTACGTAGTTTAATTTCTTTTCTGACTGGCTGCTCTTATTATATTATATGCTAGAAAGACGGAAGTGACATTGTCACCGAAGGTCCCAGGTGCAGTCTACGCAGCCGAAAGGTAATAAAAATTACTCCGATCCTCTTATACTGATACAACACTATATTCTAAGCCTGCCTATGGGCTTTCTGGAGCAACAAAATATGGAAACATAATCCTGTACAACAAATTCATGACCAAAACCACCACCATTCATACAACAAACCTGTCAAAACACACATACAACACTCATCTCCATGCATCTTGCTCATTTAAATTTACTGACAAATTAAAAGGGCCTTTTTCTGACTATTTATTTATTTATGCTACCTGGCGCAGGTGTACAGTGATTTGACCGTTGACTACCTAAAGATGTTCCTGCTAAATGTTCCAGCAACTACTCTTGCTCTAGGACTGTGAGTTCTTTTCATCTCACTCTTGCTTCCTTCCAATATACCTAGCTAGTATGAAATAAATATTGGACTGTCAGTATGCCTTTTACTGTCCATTGTCCTGGTGGGATTTGAACTGGTTGCGACGAATTCATCCTTTATCAGACTTTACTTATGTTTGTCACCTCTAATTTCGATTTGCATGCATTTAGGTTCTTCTTCATCGATGAGTTGACTGGCTTTGAGATCAACATATTCCAGGTAAATTCTTTTTCCTTTCTTCCAATTAATTATTCGACTGACTATTTGACATGTTTTTCCCCACTCGGTAATCTTTATGAACAAATGCAGCTGCCAGAGCCTTTCGGTTTCATTTTCACATGGTTTGCTGCTTTGCCTCTAATATTGTTCATAGCACAGTCGATAACTAATGCCATAGTGAACGACTTCTTAATCCTCAAGGTATTATTTTTAGTCTCCTCTCTGCTTGTCTGCTTTTTTGCATTAGACATTAGACATCAAATATGATTATTTGTTCAAGTGAAGTGATGATTATTCTCTGGGCAATCCAGGGGCCATGTCCGAATTGTGGCGCTGAAAACCTTTCCTTCTTCGGGACTATCCTGTCAGTGTCTAGTGGCGGTGAAACAAACAAAGTGAAATGTGCAGAGTATGTATTATATTCTCCTATACTTTTATATGTACATATTCCATCATTGTTGATTGTGTATAATATAGTACTGTTCGAGTTACAAATATAATACTACAATTTGTGTCAATCTGAAAATGTGCAACTCTTTGTTTTGCAGTTGTAGCACGGAGATGGTATATGACTCGAAATCTCGGCTCATCACCCTTCCAGAACCATCGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009408