BGIOSGA009418

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009418| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009418, complete gene.| tag = OsI_143...")
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Gene Name

BGIOSGA009418

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009418, complete gene.

LocusTag

OsI_14373

Ensembl Transcript ID

BGIOSGA009418-TA

Ensembl Protein ID

BGIOSGA009418-PA

Length

4035

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40375612..40379646

Sequence Coding Region

40379182..40379646,40376728..40376783,40376437..40376629,40375612..40375968

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40375612..40379646 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40375612..40379646 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAACGAGCGCCGCCTCCTCGCCCGCGCCACCGCCGCCACCGACGAGGCCGCCTCCCTCCGCGCGCGCCTCGCCGAGGCCGAGGCCGACGCCGCCGCGCTGCGCGCCCGCGTCGACCGCCTCGAGCGCGAGGCCGCCGAGCGCGACGATCTCATCAACGCGCTCCTCGCGGCCACGCGCGCCGCCGATGCCGACCTACGCGCCACCGACGACGACCCGGAGCCGCGGGACGCGGAGCAGCACCACCACCACCAGCCGGCGGCTGCGGCGTTGGATTTGGATCCGGCCGAACCGCGCGGCGCTGACGCCGACGCGGAAGCCCTGGCTGCAGCCGCGGCTCTCTACGCTCAGCAGCGCCAGCAGCAGGAGGGTTTCGGCAGCGACGACTTCTACACGGCGGCGGCGGCGGCGGCGGCCTCGGGAATGCAGCAACCATGGATGGAGCGATCAAAAGGGTGGCAGGACCTGAAGTATGAAACGGCTGAGCCGATGTATAACACAAAACATGCTGTACCACGGAGAGAATCACCTTGGAAGGTGGATGTGGAATCGTCAGGAGTTCCTGCAAAGCTTCAACTGCTTGAGCAGGAATTAATTAACCTGGAAAAGATTGGAAATGGAGACTTATCCAAGATACCATTGGTGATGAGAAAGCAAGTGAAAAGATACCAAACTCTTGCTGGGAAGATTGATGATCTTTGCAAAAGAATGCAAACAAGTGACCCCTGTGATTCAACACTGAGCTCAGAGTTTAGAACACAGAGGCAAACAGAATACTTGCTGGAAGCATTCCACCTTCAGCACCGAGCAACTGAAACTAGGCAGAAGCTCAGTGCACTGCAAGCAGAGACTGCAAAAGGAAGTTTTGGTGATGAACTGACAGCAGAAGCCAAAATGAGCACAAGAAGAGCACTGAGTTCAATTCGGAACAACTTCAAGGAAATTCAGCGTAGCCTAGAGATTTGGTTGGCAAGAATTCTGGGAGACCTTGAGGGCATGTTAGCAAGGGACGGGGCATCACGCATAAGGGAGTACTTTTTGTCTCCCTACACATCAGCTGTTCGATGA</cdnaseq>

Protein Sequence

<aaseq>MDNERRLLARATAATDEAASLRARLAEAEADAAALRARVDRLEREAAERDDLINALLAATRAADADLRATDDDPEPRDAEQHHHHQPAAAALDLDPAEPRGADADAEALAAAAALYAQQRQQQEGFGSDDFYTAAAAAAASGMQQPWMERSKGWQDLKYETAEPMYNTKHAVPRRESPWKVDVESSGVPAKLQLLEQELINLEKIGNGDLSKIPLVMRKQVKRYQTLAGKIDDLCKRMQTSDPCDSTLSSEFRTQRQTEYLLEAFHLQHRATETRQKLSALQAETAKGSFGDELTAEAKMSTRRALSSIRNNFKEIQRSLEIWLARILGDLEGMLARDGASRIREYFLSPYTSAVR</aaseq>

Gene Sequence

<dnaseqindica>1..465#2864..2919#3018..3210#3679..4035#ATGGACAACGAGCGCCGCCTCCTCGCCCGCGCCACCGCCGCCACCGACGAGGCCGCCTCCCTCCGCGCGCGCCTCGCCGAGGCCGAGGCCGACGCCGCCGCGCTGCGCGCCCGCGTCGACCGCCTCGAGCGCGAGGCCGCCGAGCGCGACGATCTCATCAACGCGCTCCTCGCGGCCACGCGCGCCGCCGATGCCGACCTACGCGCCACCGACGACGACCCGGAGCCGCGGGACGCGGAGCAGCACCACCACCACCAGCCGGCGGCTGCGGCGTTGGATTTGGATCCGGCCGAACCGCGCGGCGCTGACGCCGACGCGGAAGCCCTGGCTGCAGCCGCGGCTCTCTACGCTCAGCAGCGCCAGCAGCAGGAGGGTTTCGGCAGCGACGACTTCTACACGGCGGCGGCGGCGGCGGCGGCCTCGGGAATGCAGCAACCATGGATGGAGCGATCAAAAGGGTGGCAGGTGAGACGACAAAAAGCTGGAATCCATCCCCTTTCTCTCCCATTGACCCCTTCCTTGTTTCTTCTCTTCTCTACTAACACGTTGCCTTCCCTTACTACTACTCCTACACTACCACTTACTTCCAATGATCTTACTCCATCGAGCACTTATATTCTACTATCTTCCCAGGAAGTAGTAAATCTATTGGTGGATTGCTTAATGCTTATCCTTTTAATGGCTGCTACTGCTAATGGATGATTAGCTAGGGCGCATACTACATTTGGGAAATTTTAATGTTACTGTTAGACTTAAAATTTTTGTATGACTTAAAATTTTCACGGCACAAGTTTTTGGTGTGTCTGTTTTTGCCAGAAAACAGATAACAGTGCCTATCAAATTGATTGCAAGAAAAGTTCGCATTCAACTGCATACTTAATCACACATAACTTTGTACTTGTCTCAGAAATGTCCAAACCGCCTCGATTTACTACATTTTCTTGTTCCCCTTGTCCAAACCGCCTCTGTTAGTTTGGGTTTAGTAGCAGTAGGCTTATGCCCTTTATCCATTATCTGTGAACTGTAATAAACAATCAAATTTTGATGTAGTTAATGCTAAGTCTTAGGTGTAACATCCTGTAATTGCTCTCCGTGCACGATTTCCCAGTTGTGATAGTGATACCACCATGAACCTTCATACACCATGTCATATTGCAGAACATAGAACAGACAAACGACCACTTTGATAGCTTTCTGCATCCACTGGAATCCTGATACAAAACCTGTGGGGTAAACCATGCAAGAAAGCTACCTGTACCGTATCTGGCTCATTTGGAACCTGTGATGCGATCACAGGATTCCTGTTGTTGCTCATGCTAACAGTGCCATAGAAGACTAGTACTGCACTGCACCGAAATAATCAGATAGCCTTAAGTTACTCTGTAAAAAACCATCATCATTTTATTATTCTAAACATCTCGCCTTGTTATAATGTCATGTAGTCTCGTAGCCCTGATGGATTGTGCTTATTTTTCATGATGCATCATTTGATATTTATTATAGAGCACACATTTTTCTCGAACTCACAGGAGAGATGCACATAATTATACTATGAAGATTTTATAGATCACACTTGATAATCAGCAAAGCTTTTGTGCTTTATAACTGAACAAATATGTACCTCTCGTTAGCATAATTGAGTGGGTCACATAAATCCATCTCACACTAGTAAAACTAATCCCTAACCTAACATACCGCACATGCCCACTCAGTTTCTTTTGTTCATATTCGTTACCACATTGAGTACACATTTTTCTTTTTTGATTCATATGATTGCAAGCTGTATTTTCTCTCCTTTCTTTGATTTTCTGTCTTCAGATCTGTGTTGCAGGATAATCAAAGTTAAAGATGATAGTTTATTGTTAACCTTTATGGCCTGAAAAAGCACAAGAATTTAAAGAAAAAAAATCAAGTTTTGCATTAAGTAGGAATCAGTTTGAAGGTTAGGAAGGTTGATTTCATGGGTTCTATATGTACTTCATTCTGTGTATTCTAAAATGGAAACAGTTTTAATTAAACCATTAGAAACTGTTCGGTTTCAACTAACACCATTGTTTAGTTGCTCTTTTCTAAAATGTATAAATAGCAAATTCTTGGAAGGGTAGGGCCCTGTTGGGAGCATCGCTTATTACTTACAGTGAAGGGAAGCTTAGCTGGGTGGGTTAGTGGAAGCTACAGCCTTGTTCATTAGCCCATGGCCATATGCTCATCTTCTAGTGAGTAGCAATATAGGATTGATATGTGGGAGTCCATAATAGGTGATGTTGGTGCTGATTACTGCTCCTGGGTGTCTGGTTACTGGCATCTGGCAGCATTGTTATACGCAGTAATTTAAGATCTATTAGGGTTGCTGGAGCCTGCACGTCCAACAAGACTGCTGCATACAAACACTCAGACATGACGCTCATATGTTAATTGTAATGATACTATGAAGTGCAGTTTTCATGCCTTGGTCGACTTGAAACAGCTGTCTTTTTGGCTCAGTACAGTGATACTTAAAAGACACATTTTGATTTAAGCAAGAATCTATGCTTTTGTTATTGGCACTTAAGCGACCACTAATTTGCATATATGTATTTTTTTTCTAGATACACAGTGTTACATAAATTGAAATGTTGTAATGGTGTTGCCACTTAATGCAATGATTGATTTGCATTAATATATATTTTTTTCAATACCAGTGGTACGTAAATGGTATATATAATCTTATTATCATTGTTCTACGTAATTATGTTCATGTTATATATGGACACAAATCCTAGGTATCAATGTTTGATTGTTGGTGTCAGTCTGAGCATTGTTAGACTAGTACCCTTTTTAAATTTTTATGTTTGTGGTTCAATTTTTAATGTTCATCTTGTAGGACCTGAAGTATGAAACGGCTGAGCCGATGTATAACACAAAACATGCTGTACCACGGTAGGTTGGCACTTTTCAATTGAAGCACATGGTTTCCTGAACTTGCAAATGAATAAACGCTAGTTAATGTTTACTCTCTAAACATCTTCCATTAACAGGAGAGAATCACCTTGGAAGGTGGATGTGGAATCGTCAGGAGTTCCTGCAAAGCTTCAACTGCTTGAGCAGGAATTAATTAACCTGGAAAAGATTGGAAATGGAGACTTATCCAAGATACCATTGGTGATGAGAAAGCAAGTGAAAAGATACCAAACTCTTGCTGGGAAGATTGATGATCTTTGCAAAAGAATGGTAAGCATCATCTTTTGATACTGTATCTAGTCTTTTACTTGGATTTGCTGATACTACTGCATAACTTATTCGTAGTGTATAACTGAAGATGTGATGAATACATTAATGTAGCATATGGCTGTTATGCTAATAAATACATGCTTGGGAAGATCTGGGAATTTGGGTGTTCTAAAGATAGCGGTGACTTCTGTCTGTTAAACTAGTCATTCTCGGTTAATTGTAGGGAGGAATTAGGAGCAGGGTTTCCTATGTTGGTTAAAATTGTGCTTCACTCAATGACATTATGCTGGCTCACTTAGGTGATTCATAAATTCTGAAAACGAATGTACACTACTTCACTCACTATGCCGATATATTGTTTCCTGTTATGCATGATATCTTTTTTACTGGTCCTGTCCTTATCTGTATTAGACAGCTGCAGCAGGAGTGGGAAACTACTAACTTCTATTTATTTGGAATTTTGCTCAGCAAACAAGTGACCCCTGTGATTCAACACTGAGCTCAGAGTTTAGAACACAGAGGCAAACAGAATACTTGCTGGAAGCATTCCACCTTCAGCACCGAGCAACTGAAACTAGGCAGAAGCTCAGTGCACTGCAAGCAGAGACTGCAAAAGGAAGTTTTGGTGATGAACTGACAGCAGAAGCCAAAATGAGCACAAGAAGAGCACTGAGTTCAATTCGGAACAACTTCAAGGAAATTCAGCGTAGCCTAGAGATTTGGTTGGCAAGAATTCTGGGAGACCTTGAGGGCATGTTAGCAAGGGACGGGGCATCACGCATAAGGGAGTACTTTTTGTCTCCCTACACATCAGCTGTTCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009418