BGIOSGA009426

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009426| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009426, complete gene.| tag = OS03G08...")
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Gene Name

BGIOSGA009426

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009426, complete gene.

LocusTag

OS03G0851900

Ensembl Transcript ID

BGIOSGA009426-TA

Ensembl Protein ID

BGIOSGA009426-PA

Length

6498

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40299434..40305931

Sequence Coding Region

40305766..40305931,40305353..40305489,40305125..40305258,40304596..40304741,40304347..40304426
,40303805..40304062,40303093..40303203,40302495..40302617,40301672..40301793
,40301531..40301600,40301200..40301292,40300708..40300835,40300438..40300579
,40299434..40299565

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40299434..40305931 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40299434..40305931 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATACCCCGTCTACACCGTGCCATTGCCCGCCGATCACTGCTAACCTCCACCGCCCTCCTCCCCGCCGTCGCCCGCCACCGCGATGCGCCGCTGCCCTCCGCCCCCGGCCTCCCCCGTCTGCTCCACCACGCGCCGGGGGCGTCCGATCAAGCCCGGAAATCAGGTCCTCTTACGCTCTACAGGGATCTGGTGAGCCAAGGGAAACTCCAACATGACATCTACCAGGAAAATGTAGCAACTCAGCTGGACAACTTACTTAGACGACTTGAGCAATACGAGATGGAAATGGAGGATTACCATGCAAGACTCTCTATGTGGGAAAATACCCGGGAGAAACAAAGGCGAAGGCTTCTTGTTCAAGAAGCTGAGGATAAACAGCGTGATGGGGTGTGGATAGATGAGAAAAGGGGGTTTCTTGACAAGTTAGTGTCAAGGAAAAGAAGAGGAAATATAGAACCTGGAGTTGGGAAATGGGTCTCATATTTGAACCGAGAAAAGAAACTGGATACCTTGGTTGGCCAGAAGCCTGTTGCACCCATTGCTCCGAAAGGAATATATCTTTACGGCAATGTTGGAAGTGGAAAGACAATGTTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTATCAAGCACAGGAGGAGATTCCACTTTCACGAGGCTATGCTTGAAATACATGATCATATGCATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGATATCAAGCCTCCCTTTCGATGGGAAAACTAAGGAGTGGCTAATTGGGGAAGAGAAGTACAAACAAAATACACAACAAAAGCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCTGTCACCATTCCAGTAATGTTTGGGAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATATGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MIPRLHRAIARRSLLTSTALLPAVARHRDAPLPSAPGLPRLLHHAPGASDQARKSGPLTLYRDLVSQGKLQHDIYQENVATQLDNLLRRLEQYEMEMEDYHARLSMWENTREKQRRRLLVQEAEDKQRDGVWIDEKRGFLDKLVSRKRRGNIEPGVGKWVSYLNREKKLDTLVGQKPVAPIAPKGIYLYGNVGSGKTMLMDMFYGATEGLIKHRRRFHFHEAMLEIHDHMHDVWKRRDEDKSIESSAFSWISSLPFDGKTKEWLIGEEKYKQNTQQKHILLAVADKFLVDRQANKSGASILCFDEIQTIDVFAVVALSGILSRLLSTGTVLVSTSNKAPEDLNQDGMQREIFLDLLSKLDENCNKILVGTETDYRRLIPTDGLTQIHYFWPLTSDIRSMYEAMWHDITRQTGGNIISVTIPVMFGRYLEIPKSCNGVARFDFEYLCGRPVGAADYIAIARNYHTIFISDIPAMSMKIRDKARRFITLIDELYNHHCRLVCLAASSIDDLFQGTDEGPLFDLESFQFEGEAEGAKLRRDVLAEGNVGAAPSPTGLVAILSGQEEMFAFRRAISRLIEMQTSLYMERVERVHSSLQQQSSVLTKSSTVSQSAPSV</aaseq>

Gene Sequence

<dnaseqindica>1..166#443..579#674..807#1191..1336#1506..1585#1870..2127#2729..2839#3315..3437#4139..4260#4332..4401#4640..4732#5097..5224#5353..5494#6367..6498#ATGATACCCCGTCTACACCGTGCCATTGCCCGCCGATCACTGCTAACCTCCACCGCCCTCCTCCCCGCCGTCGCCCGCCACCGCGATGCGCCGCTGCCCTCCGCCCCCGGCCTCCCCCGTCTGCTCCACCACGCGCCGGGGGCGTCCGATCAAGCCCGGAAATCAGGTAATCGCCCTCCCGCGTGATCCGATCCCCTACCGCTCCGCCTCTTCCTGATCACTCTCACTGGCAAAAGTGCCTGTACAGCCGTAGCATCTTAAGATTTTTTCCTCTTTTTTTTCCCCGTAAGCAAGCTGCCGATCATTTTATCTGATGGATGTAATTCCACATCACGCTACCGTTCGCGATCCATAATTTCGTTTTTTCGTCTGAAATCCAACCGCATATGTGACTTTTCTTCTTAATTTTGGTTTTCTCATACCCTTTGTGTTCTATCTGAAGGTCCTCTTACGCTCTACAGGGATCTGGTGAGCCAAGGGAAACTCCAACATGACATCTACCAGGAAAATGTAGCAACTCAGCTGGACAACTTACTTAGACGACTTGAGCAATACGAGATGGAAATGGAGGATTACCATGTAAGCTGCATGTGCCTTGTGTTCACTACTACTAGTTACTAGTAGTACCTTTTTCACATTTTTTTCAATAATATTATTTCTGCATAAAGTGCAGGCAAGACTCTCTATGTGGGAAAATACCCGGGAGAAACAAAGGCGAAGGCTTCTTGTTCAAGAAGCTGAGGATAAACAGCGTGATGGGGTGTGGATAGATGAGAAAAGGGGGTTTCTTGACAAGTTAGTGTCAAGGTGATATTTTTTCTTCTAACTGAAATCTACCCATTGTTCCCCATGTGGTATTTTCACTAAGTCATTCTTGAAATTAGATGAAGTTCCACTATCCCTTTTATTTATCTATAGACTTCTCTTCTGACTTCTGACTACCAACTCCTTCAATAACAGTAGCACTAAAATGACGATAAACAAGTATCATGTACAATACATGCACTGAACTTCTGACTTCTGACTACCAACTCCTTCAATAACACTAGCACTAAAATGACGATAAAACAAGTATCATGTACAATACATGCACTGAACTTTGCTTGCGAAACCAAGAACAATGTAACTAAACAGATTGTTCAACTTGTTGCATGGCGTTATTTGACTTTTCGTTTGGTGATTAATTCCAGGAAAAGAAGAGGAAATATAGAACCTGGAGTTGGGAAATGGGTCTCATATTTGAACCGAGAAAAGAAACTGGATACCTTGGTTGGCCAGAAGCCTGTTGCACCCATTGCTCCGAAAGGAATATATCTTTACGGCAATGTTGGAAGTGGTAAACTAATCAATAACTTCATTATAATAGTTTTTTGATCCCATCATTCTTCTAATATCCTAACATGGCCTGCATATGAATAACTAATTCTTTCTCCTGGTTCATATTTTTAATCAAACACTCATTATTTATCATTTATCGTGTTAATGTTGTCCTTTTGGCAACATAGGAAAGACAATGTTGATGGACATGTTCTATGGGGCCACAGAAGGTCTTATCAAGCACAGGAGGAGATTCCACTTTCACGAGGTAATTAGTTTAGAACTATGCATGGTAGTGCCTGTTCATTCATTGGAATGAACGCGCAACTATTATATTTGAAGAACAATTGTTAAGAAGAAAAATCTGATCTGTTGTTCATCGAGCAGTGTGCATGTCCAACTGAACTCAAGTTCCTAGCTGCACTTTGTGTGCTAGGTGGCTAGGAATAGCAGAATTCTGTGAACTAACTTGTTGAATGGTTACCAACATATTCAGTTGGTGTTCTGTTGTTTAGCATTTTTCTGAATAGTGTTGAGTTCCTTTTGATGCAGGCTATGCTTGAAATACATGATCATATGCATGATGTATGGAAGAGACGTGATGAGGACAAGTCTATTGAGTCGAGTGCTTTCAGTTGGATATCAAGCCTCCCTTTCGATGGGAAAACTAAGGAGTGGCTAATTGGGGAAGAGAAGTACAAACAAAATACACAACAAAAGCATATCCTTTTAGCTGTCGCTGACAAATTTCTTGTTGATAGACAAGCAAATAAGAGTGGAGCAAGCATTCTATGCTTTGACGAGATACAGGTACATGAACTTTGATATTTTGAATATTCAAGTCATTTTCCTGTATGTTATTATTTCTAAAAACGAGAATTGGCATTCCTGCCACAGATAGGATCTTGTTTACCAGATTACTCCTAGGTTTAGCAATCTGTTGCAATTACATAAAAGGAGTAAAGAATAATCTTGTTGAATATTTCTTGTGAAATCTAATTTTGCTTATCTTGGCTGTCTCTTCACTAAATCTTTTACTTTACATAGTGTATGTTATATAGCACGTGTGCTATATAGCATCTACATAATCACAAGTATATGGAAAAATAATTGATCGAGTGTCAGTTATTGTTAATGGTGGTAAATAAGATTGTCTAGTAAAGCTCAAATTAATTAGTTATTTTTTCTTCTCAGTACTTGATGCTGATGCCTATTAAAAAAAAGTTCAATCTCAGTTCTTTCTGTACTATGAGGTATGCTATGTGCATCTCTTGAGTACCTTTTTGCTACTGCACCTGTATGTATGTAATAGTATTAGCTTGCAAACAAATATTTTATTTCCATTGTTAATGTAATAATTTCTGGTATCCATAGTATTTTTTTAATACACTGGGAAACTTCATCTATGCAGACAATCGATGTATTTGCCGTTGTAGCTCTGTCTGGTATTCTCAGCAGATTGTTAAGCACAGGAACTGTGCTTGTTTCGACCAGTAATAAAGCACCTGAAGATCTGAATCAGGCAAGTCGTTTTTTATGATTTTTTTCTCCTTTTTTATCAAATACTTCATATTTTGGCCCAAAAAAAACTTTAACCTGGGGATGAACTTCAGTAGGTGTTTTCAACTTTACTCCTAGAGATCAGAACAACTTGTCACATATATAAGATGATGGAAAGAGTATCTCAAGTAGCAATCTTGGATTTTTAGAGGAGCTAAACTAGAATTGTCCAACAAAGCCAAGAGGTGCAGACACTAAATAATTCCTGTAATGCATCTTTGTTTCTTCTAGTTAATGATGAATTTAGCAGTTAAATTTCATCAAAGTATCATTCCATGGCTTAAACTACTACTACCTATTTATACGTGGATATCTTCTTGTGATCTAACTGTTTTCAAGGCACAACATTCATCTACTAGAAATTACAAGGTGCTGACTTGAAGTTAAAACAATGGTGTGCTTCCCTTTCACCTTTTGTTTTTCTCTTGGTTTTGTAGGATGGGATGCAGCGGGAAATTTTCCTTGACTTATTGTCTAAGTTGGACGAGAACTGCAACAAAATTCTTGTTGGAACCGAAACAGATTATCGCCGCCTAATTCCAACTGACGGCTTAACTCAGGTTAACCTCTACCTGTTTGTAGCAATAGGAGATTTATGACACTTGTCTGCATAAAATGATACACCTATAGTTTTCATGTGCTAGAGACTAAAATAAGTAGTTTATATGTTATCTTATCACTTCCTTGCACACTTTTTAGATTTTTTAGAAATAATTTTGTGCTGATAAGCTGGGGGTGAGCAGATCACATGATCAGTACCTCAATTTTAGTTTGCAAAATCTTCTAGTTGACTGTTGACATTCTTTTAAGAACTTTTGGTTTGTATTACGGTGGCCATTGGACTTCATCATATTGTAGGACACTAGGACTTCGCTCTCTTGCCATTTAGTGCAATGTCTTTTTCTTTTTTCTTTTTTTTTTTTTGAATCTCAGTGCAATGTATTGGTAAATGGTAAGATAGCACTGCTTTGCTTCAGTAACCTGAGTTTGATAATTCACCAATCATGTATTCATCTCTTGGTGACTATGGCATGAGTTATCATGTATGTTGCAAGCATGGAACTTCAATCTACTTTTGCAAATCTCGTGGTATACCATAAAACTACCTTTTTGTGGGTCCTATAACTAAAACTATCTTGTACTGTAGGACTCCATAAAATGCAATGCAATTGTTAGGTGTATCCTTTTCTATAACTGGATTGTATCTTCACAATAAGTTCATCTTCATGTAACAACTAATGGTTCTCCATCTTATCTACAGATTCACTACTTTTGGCCTCTCACTTCTGACATTCGGAGTATGTATGAGGCTATGTGGCACGATATAACTAGACAAACAGGAGGAAACATTATTTCTGTCACCATTCCAGTAATGTTTGGGAGGTGCGCACATAGCATAAAGCATCTCTATACTGTTGAAAATGAACTGAATTTAACATTGATATTATGAATAGGTATCTTGAGATTCCTAAAAGTTGCAATGGAGTGGCAAGGTTTGACTTCGAGTATCTGTGTGGCCGCCCAGTAATATCTTGTCTTCTTAATTTACATTTATTTAGTATGCAAGTAGATGAGGGGAACTAATTGGTTCATGATCAGGCACTTGTGGCTTGACAAAAAAATGTTTAGTATCCATCCTTTAAACCGTCTAAACTTGGAACTGAATTCTATTGTTATATACAGGAGTATTTGTTATTTTGAGCTGGGATCATGTGATATATTGCAGCTCATTATATAATCCACTGTTTATTTTAATTATCAGGTTGGAGCTGCAGACTATATAGCAATAGCCAGGAACTACCATACAATTTTCATATCGGATATTCCAGCTATGAGTATGAAGATTCGTGACAAAGTATTTCTTCTTCTATCTCCTTTTCTGATTCTTTTAGTTTGCTAAAATCTACTTAATTGTGCTTCCGGAGTGTGAATACTGAATTGAATATAAAACATTGGAAGATGGAAGAGATCTTATAATTCAAAAGTGTCAACACATGAAAACTGAGAGGAAATAATTCATCAAGACAAGAGAAATGGAAACTATCTTAGTATATCTCATGGTTTCAAGCTCCATTTTTTTTTATTTTCTAGAATCATTTGGATTCGTGTGGTGTCTGTACTATTTAAACATGGTGATGACATTGAGAAGTTAACAATTATACCAGATGCTTGTGTTTTCTGTGTTTATTTTGATGCTGAATGAACTTGGTCTCATTCAGGCAAGAAGATTTATCACCCTTATTGATGAGCTCTACAATCATCACTGCCGTCTTGTATGTCTAGCTGCCTCATCCATTGATGATCTTTTTCAAGGAACTGATGAAGGACCTCTTTTTGACTTGGAGAGGTAATATTTGCATTTATACTTTGTTGTACATGGTGCTTCCAGCTGTCTGCAATATTTCGCATTACAGAAGTTTTTAATTTGCAACATAATTCAGAGTGATTTTTGACATGGGAGGTCATGTTATGCAGTTTTCAGTTCGAAGGTGAAGCTGAAGGGGCAAAGCTTAGGAGGGATGTTTTAGCAGAAGGTAATGTTGGTGCAGCGCCTTCTCCTACAGGCCTAGTGGCAATTTTGTCTGGCCAAGAAGAGATGTTTGCATTCCGTAGGGCGGTAAGTAAATAGCATTTTTACTTTCTGATTGTAGCTATTTGCTTGAGTTCAAACGCACTAGTGAAGTATCATTAGCACTGGGGAGTTGAATTTCGTTCAGAACTTACCTTATTATCCAGTTTACTGAATATAAGCTCACAGTAACTCCTTCTTACAGTAACTCCTTAGAAGGTACACTCGTTAAGCAATATCTGCATTCTAAATGCATGAAAATAACACATGCTCCCTCCGTTTCAGGTTATAAGATGTTTTGACTTTTGTTAAAGTCAAACTGCTTCAAGTTTGACTAAGTTTATAGACAAATATAGTAATATTTACATTACCAAATTAGTTTTATTAAATTAATAATTAAATATATATTTATAATAAATTTATCTTGGGTCGAAAATATTACTATTTTTTTTCTATAAACTTGGTCAAACTTGAAGCAGTTTGACTTTGACCAAAATCAAAACATCTTATAATCTGAAATGGAGGGAGTATAAGGGCCTGTTTACTTTGATGCCATTTTTAACCATAAATTTTTTTTGGTAAAGTTGCCAAAAAAATATCAACGTTTAGTTTGTTGCTAAATTTGGCAAATTATAAGAAATCCTGCCAAAATTTTGATAATATTATCATCTTGCTAAAATTTTGACATTGCTAAAATTTGGTAAGGTTTATTTTGGCTACAATCTGAACAAACCCTAAGATATGAGCACTGTCCATGAGTCATGACTTTGTCTGGACCTATATTTCTTTCCAAAATTTCTGGACATGTTTGTATTCAATTTCTAACCCGTGTTTTCATGTCGGCAGTACACCATGTTTGAGTTAGATACTGTCATCATTCTTCTTTGAATTAATAACTGCAATGTTCATCTGTTTCACAGATATCCCGTCTCATAGAAATGCAGACCTCACTGTATATGGAGCGCGTCGAGCGTGTGCACTCATCCCTCCAACAGCAGAGTTCGGTTCTTACAAAGAGCAGCACTGTTTCGCAGTCTGCTCCGTCCGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009426