BGIOSGA009427

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009427| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009427, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009427

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009427, complete gene.

LocusTag

OSJNBA0015N08.15

Ensembl Transcript ID

BGIOSGA009427-TA

Ensembl Protein ID

BGIOSGA009427-PA

Length

3468

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40267732..40271199

Sequence Coding Region

40271197..40271199,40270826..40271023,40269997..40270104,40269803..40269907,40269643..40269699
,40269366..40269562,40268660..40268759,40268452..40268564,40268211..40268364
,40268045..40268122,40267732..40267950

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40267732..40271199 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40267732..40271199 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGTAACAGTACCAACCTCGATGCGGCGATAGAGTCGCTCCTCAACGTGGAGAAGCAGATGAGGCTGGCCGGCGATGTCGCCGGCACGAGGAAGGCCGCCATCGACATCGTCGAGCTCTGCTACAAGGCCGGCGCCTGGAAGACGCTCAACGATCAGATCGTGGTCCTCTCCAAGAGGAGGGGCCAGCTTAAGCAGGCTATCACTGCCATGGTTCAGAAAGCAATGGAGTACATTGACTTAACGCCAGACATGGACACACGTATTGAGCTAATCAAGACGTTGAGCAGTGTATCTGCTGGAAAAATATATGTGGAGATAGAGAGAGCAAGATTGATCAAAAGACTTGCAAAAATCAAAGAGGAGCAGGGACAGATTGATGAGGCTGCTGATTTAATGCAAGAAGTTGCTGTTGAAACATTTGGCTCCATGGCAAAGACAGAAAAGATTGCTTTCATTCTAGAGCAGGTCCGGCTGTGCTTGGATCGTCAAGATTATGTACGCGCACAGATTTTATCCAGGAAAATCAGTCCTAGGGTATTTGATGCAGACCCGTCAAAGGAAAAAAAGAAACCGAAAGAAGGTGATAATATTGTTCAGGAAGCCCCAGCAGAGATACCTTCCCTCCTGGAACTGAAGCGCATCTACTATGAACTGATGATTCGCTATTACTCGCACAACAATGATTACCTGGAAATCTGCCGTTGCTACAAGTCGATTTATGAAATTCCATCAATAAAAGAGGATCCATCAAAGTGGATACCGGTTCTTAGAAAGATCTGTTGGTATTTGGTGTTGGCGCCTCATGATCCGATGCAATCAAGCCTTCTCAATGCCACACTCGAAGACAAAAATCTCTCCGAGATACCAAATTTCCGGTTACTGCTGAAGCAACTTGTAACCATGGAGGTGATTCAGTGGACAAGCTTGTGGGAATTCTTTAAAGATGAATATGCGAATGAGAAGAATTTTCTCGGAGGAGCTTTGGGTGACAAAGCTGCAGAGGATCTGAAATTGAGGATCATTGAACATAATATCTTGGTTGTTTCGAAGTACTATTCAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGTGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGAAGATTGACAGGCCAATGGGTGTTGTATGCTTCCGCACAGCACAAGACAGTAATGGTATACTCAATTCCTGGGCGGCGAACCTCGAGAAACTCCTCGATCTTGTTGAGAAGAGCTGTCACCAAATACACAAGGAGACGATGATCCATAAGGCGGTGTTGAAAGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MEGNSTNLDAAIESLLNVEKQMRLAGDVAGTRKAAIDIVELCYKAGAWKTLNDQIVVLSKRRGQLKQAITAMVQKAMEYIDLTPDMDTRIELIKTLSSVSAGKIYVEIERARLIKRLAKIKEEQGQIDEAADLMQEVAVETFGSMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADPSKEKKKPKEGDNIVQEAPAEIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKSIYEIPSIKEDPSKWIPVLRKICWYLVLAPHDPMQSSLLNATLEDKNLSEIPNFRLLLKQLVTMEVIQWTSLWEFFKDEYANEKNFLGGALGDKAAEDLKLRIIEHNILVVSKYYSRITLKRLADLLCLSLQVAEKHLSDMVNSKSLIAKIDRPMGVVCFRTAQDSNGILNSWAANLEKLLDLVEKSCHQIHKETMIHKAVLKA</aaseq>

Gene Sequence

<dnaseqindica>1..3#177..374#1096..1203#1293..1397#1501..1557#1638..1834#2441..2540#2636..2748#2836..2989#3078..3155#3250..3468#ATGGTGAGCTCACCTCCCTCCTCCCCTCCCCCACCCCGACCCTCCGCCCGCCTCTCCGGGGTTTTGGCCTTCCCGCCCGCCCCGCCGCGGCCCGCACTTCTCATCTAGGGTTTCGATCTCTTGCGGGTTGATCTGATGCCTTGCAATCTGACCCTGTTTCTTGTGGACCGATGCAGGAGGGTAACAGTACCAACCTCGATGCGGCGATAGAGTCGCTCCTCAACGTGGAGAAGCAGATGAGGCTGGCCGGCGATGTCGCCGGCACGAGGAAGGCCGCCATCGACATCGTCGAGCTCTGCTACAAGGCCGGCGCCTGGAAGACGCTCAACGATCAGATCGTGGTCCTCTCCAAGAGGAGGGGCCAGCTTAAGCAGGTCAAGCTCTCGTCCTCTCCTATCTTTGGACTTCGTTTAGTAGTTCTAGTTGAATTACTAGCTGTATGTAGCTATCTAACTGATATCTTCAAAGTTATACTCTACTGACTAGAGGCGCATGCAAACCCCAAAGTTTCCGAGGAGCACATGTAATTGAGGCTAACATAGCATACCCACCTGCTATTATGTTGTCACTCTGAATCACCAGCCATTGATTTTATTTTTGTAATCTTGGTATGAACTTAGAGTTATTCTAAGTTCTAGTGATCTTAAATAGATTACACACAATTCAAATTATCAACGCTCACTGAAAGACAATAGTCATATTTTGCTCGATGTAATTGGATATATGCCCTTATTTCTAAGGGATACTGGTGGTAGGGAAGGCATGCCATAGTGTTGTGTAAGATTACTCTTTTCTTTGCAAAGCATTATGTGTTTAGGTTGAGTTTCAACTAATGTTTTGTTGAGTGCTAATCGAGTGCATTGTATATTTCACTTCGAAACAATATTTGCATGCATTTTTCTCCCCCCAAAATTTCAGCATTGTCTCTCCATATCCCATACTTAGGTCTTCCTGAAATATCCAGTTATTATTTACAAGTTGAACAATATTTCATAAATCATGCCTGTTTATGTATGCAATACTATTGCTGCTGCATTATAACTTGGTTATGCACATGTGGCATGTCTCAACTCTTCTAATTCTTTATTTTTACAGGCTATCACTGCCATGGTTCAGAAAGCAATGGAGTACATTGACTTAACGCCAGACATGGACACACGTATTGAGCTAATCAAGACGTTGAGCAGTGTATCTGCTGGAAAAGTGAGAATCATGGCTACTCAAATATTGCTTACCTATAAGATTTAATGCCCTTTCATGTGTGTAATCTCACTGATATGCATCAACTGTAGATATATGTGGAGATAGAGAGAGCAAGATTGATCAAAAGACTTGCAAAAATCAAAGAGGAGCAGGGACAGATTGATGAGGCTGCTGATTTAATGCAAGAAGTTGCTGTAAGTTCAAGCTGCACTATAATCATGGCACACAGTTACATCTACTATAACCACCATAGTGTTGTCTTCGCATCTACATAATGTCTAACAAGTTCATCCTCAGGTTGAAACATTTGGCTCCATGGCAAAGACAGAAAAGATTGCTTTCATTCTAGAGCAGGTATGAAGAAATACAGTAATAAAGCTTGAAATTGTTACAAAAGCCTGGGTTCTGGAATCTTACTGTAATCATGATCACAGGTCCGGCTGTGCTTGGATCGTCAAGATTATGTACGCGCACAGATTTTATCCAGGAAAATCAGTCCTAGGGTATTTGATGCAGACCCGTCAAAGGAAAAAAAGAAACCGAAAGAAGGTGATAATATTGTTCAGGAAGCCCCAGCAGAGATACCTTCCCTCCTGGAACTGAAGCGCATCTACTATGAACTGATGATTCGGTATGTCTTCCTGCTCAGTGAGACTAATTCATCATGAGTTCATGTCGCTTCTAGTAATGTTGGTTGAAGTTAATGCTACCCCCTCAGGTCGCAAAATATAGCTACCTTTAGCTATGAATATGGACAAGTTCAGATTCACAGATAAAGGTAGCTATATTTTGGGATGGAGGGAGTTCTATTTTGTTCAGCAAAGAATTGCTTTCGACTGTTTGATTCATGATCTAATACATAGTGATAGTTAACTATTTAGAGTTATCTGCTAAGTCAATCTAATGCTTGGTTGATTAAACAAAAGAACTAATGTGGTGTCATATCCCTTACTGCTATTAGACAATTGTTTATGTAGCTTGTATTTTATTTACTCAGGAAATATCAATTCCTCTTCTGCGGTTACCTGTCAAATATGTTTGCGATTGTTTACCATCATCATGTTATGGTTACTGCTTGAATGCCTTATTTGTATCCATCAACCTTTTTTTATGCTACAATTATGAATACTGTATTTGTGCTGTTTGAATTCTCGCTAACTGATTTTATAACCTGCTAAGAGTATATATTTTTTTCTATATATGTGGTGAAACATGATTTCTGTTTGTCTCTATTCAGCTATTACTCGCACAACAATGATTACCTGGAAATCTGCCGTTGCTACAAGTCGATTTATGAAATTCCATCAATAAAAGAGGATCCATCAAAGTGGATACCGGTAAAGCTCTCTCATTCGCAAGTCTTACTTGGTGTGGTGTGTGCGCATACTCACTCACGCTATAATGGTTATCTGACTGCCTGAATTCGCTTTAGGTTCTTAGAAAGATCTGTTGGTATTTGGTGTTGGCGCCTCATGATCCGATGCAATCAAGCCTTCTCAATGCCACACTCGAAGACAAAAATCTCTCCGAGATACCAAATTTCCGGTACGTTATGTTGCTTTCAGGATTACAAATTATCATGGTTTTTAATGTTCTTTCTAATTCCTACTTTTGCTGTTTGGATGGGAATAGGTTACTGCTGAAGCAACTTGTAACCATGGAGGTGATTCAGTGGACAAGCTTGTGGGAATTCTTTAAAGATGAATATGCGAATGAGAAGAATTTTCTCGGAGGAGCTTTGGGTGACAAAGCTGCAGAGGATCTGAAATTGAGGATCATTGAACATGTATTGCTTACTTGACTTTATCGTATTTCTCTTTTGGTTCCTTGCTTTGTATTTGTCAGTTGATTTCCAGTTCTTTGCTTTTGTTCAGAATATCTTGGTTGTTTCGAAGTACTATTCAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGTTTGTGTTCCCAGCCTTCCTAGCATCACTTGTATTCCTCTTGTTACTTTGTAGCCTACCAAGATCTAACATGCCCCACATTTTTCTCATTCAGGTGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGAAGATTGACAGGCCAATGGGTGTTGTATGCTTCCGCACAGCACAAGACAGTAATGGTATACTCAATTCCTGGGCGGCGAACCTCGAGAAACTCCTCGATCTTGTTGAGAAGAGCTGTCACCAAATACACAAGGAGACGATGATCCATAAGGCGGTGTTGAAAGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009427