BGIOSGA009429

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009429| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009429, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009429

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009429, complete gene.

LocusTag

OSJNBA0015N08.13

Ensembl Transcript ID

BGIOSGA009429-TA

Ensembl Protein ID

BGIOSGA009429-PA

Length

3387

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40260328..40263714

Sequence Coding Region

40263524..40263714,40263323..40263398,40263137..40263229,40262961..40263035,40262585..40262689
,40262386..40262476,40262094..40262299,40261519..40261602,40261053..40261118
,40260915..40260977,40260488..40260728,40260328..40260398

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40260328..40263714 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40260328..40263714 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCAGCCGCAGTGCTCCGGAGCCATGGCGCCCGCCGCATCCTCTCCTACCCCACCCTCCGCGCCGCCGTGATCTCGGGCCCCACGGCGCTACCGGATGCGTCGGCGGCTGCGGCGGCGGCGCCCCAGCAGCCACCGCCTCTGGCTGGAACCCTGTGGGCGAGGTCCATGGCCACCTTCACCCGCACGAAGCCTCATGTGAATGTTGGCACCATTGGGCACGTCGATCATGGCAAAACCACACTCACTGCTGCGATTACCAAGGTGTTAGCTGAGGCAGGGAAGGCTAAAGCTGTTGCTTTTGACGAGATCGACAAGGCCCCGGAGGAGAAAGCAAGAGGAATCACCATTGCAACGGCTCATGTGGAGTACGAGACTGCTAAAAGGCATTATGCTCATGTGGACTGCCCAGGGCATGCTGATTATGTCAAGAATATGATCACTGGAGCTGCTCAAATGGATGGTGGTATTCTTGTCGTATCAGCTCCTGATGGCCCCATGCCACAAACGAAAGAGCATATTCTTCTGGCCCGACAGGTTGGTGTGCCATCACTTGTATGTTTCTTAAACAAAGTTGATGCTGTTGATGATCCCGAGCTACTAGAGCTTGTAGAGATGGAGCTTCGTGAGCTCCTCAGTTTCTACAAGTTCCCTGGTGATGAGATTCCAATCATCCGTGGATCCGCCTTGTCAGCCTTACAGGGGACTAATGATGAGATTGGAAAGAATGCCATTTTGAAACTAATGGATGCAGTTGACGAGTATATCCCTGATCCTGTGAGGCAGCTTGATAAGTCTTTCTTGATGCCGATAGAAGATGTTTTCTCTATCCAGGGCCGTGGAACTGTTGTGACAGGGCGTGTTGAGCAGGGGACAATCAAAACTGGTGAAGATGTTGAGATCCTAGGTTTGACTCCAAGTGGTCCCTTGAAGACTACAGTTACTGGTGTTGAGATGTTCAAAAAGATACTGGATCATGGAGAGGCTGGTGACAATGTTGGTCTTCTTCTTCGTGGTCTTAAGCGTGGTGATGTACAGCGTGGCCAGGTGGTGTGCAAACCTGGTACCGTTAAGACGTACCAAAAGTTTGAGGCGGAAATTTACGTCCTTACAAAGGATGAAGGTGGTCGCCACACAGCCTTCTTGTCAAATTACAGTCCACAGTTCTACTTTAGGACTGCCGATGTCACTGGAAAAGTTGTGTTACCTGATGGCGTGGAAATGGTTATGCCTGGTGATAATGTAACTGCAGGATTTGAGTTGATATCACCTGTTCCCCTTGAGCCAGGCCAGAGATTTGCGCTGAGGGAAGGCGGGAGGACAGTTGGTGCCGGAGTTGTTTCCAAAGTTTACAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAVLRSHGARRILSYPTLRAAVISGPTALPDASAAAAAAPQQPPPLAGTLWARSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVVCKPGTVKTYQKFEAEIYVLTKDEGGRHTAFLSNYSPQFYFRTADVTGKVVLPDGVEMVMPGDNVTAGFELISPVPLEPGQRFALREGGRTVGAGVVSKVYS</aaseq>

Gene Sequence

<dnaseqindica>1..191#317..392#486..578#680..754#1026..1130#1239..1329#1416..1621#2113..2196#2597..2662#2738..2800#2987..3227#3317..3387#ATGGCCGCAGCCGCAGTGCTCCGGAGCCATGGCGCCCGCCGCATCCTCTCCTACCCCACCCTCCGCGCCGCCGTGATCTCGGGCCCCACGGCGCTACCGGATGCGTCGGCGGCTGCGGCGGCGGCGCCCCAGCAGCCACCGCCTCTGGCTGGAACCCTGTGGGCGAGGTCCATGGCCACCTTCACCCGCACGTGAGTCCTTCTTGGATCAGATCCGTTGCTCTCCGCGCCTGGTTTTCTCTCTTCCTGTGGTTAGCATCTAGCGATCGATCCGTGTGTGACTTGTGTTTTGAATTTGTTGTATGAATCTGTCTCAGGAAGCCTCATGTGAATGTTGGCACCATTGGGCACGTCGATCATGGCAAAACCACACTCACTGCTGCGATTACCAAGGTCTGATTTGTCACATATAGTGCAAGTTCAGTTGTTTTCTTTCGAGTCCAAACAATTTCAACGCGTGAAATGCCTTTTTTATGCTCTTTGCAGGTGTTAGCTGAGGCAGGGAAGGCTAAAGCTGTTGCTTTTGACGAGATCGACAAGGCCCCGGAGGAGAAAGCAAGAGGAATCACCATTGCAACGGTGAGCCTTAGCACTAGTTTTTTCTTCATTTGGACCAGATGGTGTCCTTGTATGTCATCATGTGTAGATCAAGTCTGAGTTATGTGGTGCTGGTTGTGTAGGCTCATGTGGAGTACGAGACTGCTAAAAGGCATTATGCTCATGTGGACTGCCCAGGGCATGCTGATTATGTCAAGGTAAGTAGTTCTATTTTACTAAAGTGGAAGTTATCAAGATTATATATTGACAATCTTCACGAACAATAACCATGGATATTATGTAATACTAATTCATTGGATATTATGAAATTGCTGAGCACATTTGTAGTATGCGCTGTCAATATTAATTATTAAATCCAGTAGGCTCTTCTGATACTCAGGCTTACTGAGTTACTGTCCCGGAACTGCTAGAATCCTTAATATTGAGCAATGACCAATGACATCTCTGTTTCAATGTGCACATTTTCAGAATATGATCACTGGAGCTGCTCAAATGGATGGTGGTATTCTTGTCGTATCAGCTCCTGATGGCCCCATGCCACAAACGAAAGAGCATATTCTTCTGGCCCGACAGGTTTTGAATCACTGACAATTCTTTATCTTTTTCACATTCAGTGTGAATTTTAGTATATCATTTCATTTCTGGTTACTGATTACTCAAGCATTCCTCTCGGCATTTTAGGTTGGTGTGCCATCACTTGTATGTTTCTTAAACAAAGTTGATGCTGTTGATGATCCCGAGCTACTAGAGCTTGTAGAGATGGAGCTTCGTGGTATGCTAGCATTCTGCATCTCTTTACATTGTTGTATGAATTGTTTTGTTCTTGTTCTAAGGTATATTTCCCTTTTTTTCCTGCAGAGCTCCTCAGTTTCTACAAGTTCCCTGGTGATGAGATTCCAATCATCCGTGGATCCGCCTTGTCAGCCTTACAGGGGACTAATGATGAGATTGGAAAGAATGCCATTTTGAAACTAATGGATGCAGTTGACGAGTATATCCCTGATCCTGTGAGGCAGCTTGATAAGTCTTTCTTGATGCCGATAGAAGATGTTTTCTCTATCCAGGTGATTAACTTTATGCTATGGTATACAGCTATTTTTTTTTCATATTCACTGTAGTTTTGAACTGATTGCAATTAAAAATTGAATTTACTTCCTCTGTGCCAAGTACAATGAGCGAACCTATCTTGATCTATGGATATAATTAGTGTTGTAATTCTGAAACCGGCTCAAGGTTTGAATTATGTACTTGTTAGCATCTGTTTATACAAAATTAGCCATTGAAGTTGATGGATGAATGCTGCTGGGAACCTAGAAACTATACAGCAAGAATATATGACACTTTATACTTTGTTCTGTCAATAGGCATTCTATTTAACTCCTGAAAAGATTTTAACCATTGTACCCTTAAGTCTCTGGAAGAGAAGTCATATGATTAAATTGTTTATATTATGTTAATTTTGTTCTTGTAACTATGAGTTTTAGTGTGCCAGAACACTGTTTACTGTTTTTGGCAAGTATAAGGATGACACAGACCAATTGATTTCAATCTGCAGGGCCGTGGAACTGTTGTGACAGGGCGTGTTGAGCAGGGGACAATCAAAACTGGTGAAGATGTTGAGATCCTAGGTTTGACTCCAGTGAGTAAAATATCTGATTTGTCTTTTATTACTTAAGTCCAGTAATGTGGTTTATACCGCCTCTTAGACGTACAAATTTATTCTTGAGAGTATGACCTGCTTGGTTCTGAAGATTCGAGAATCCACAATCTTTGTAGTTATATCTTACCCACGATTTTTTTACACCATATGCACATTTGACTTCACGCAAATATCGGAATGGAATATGTATATGTCATAATGGGTTAAGCTAATATATTTTTTTACCAACTATGGTTATTGAAAGAAAAATGTAAGCCTGCTACATAAAGCCTCTTGACATTTCTAGGTTCTTTGGAACTGTCATACGTTGATTCCATGTTGTATGTTATGTTGCTATTTTGATGCATTGTGAATTTTGATGAGCACTTCTTGGTCACAGAGTGGTCCCTTGAAGACTACAGTTACTGGTGTTGAGATGTTCAAAAAGATACTGGATCATGGAGAGGTCTGTTCTGAAAGTAAACCATTTACTGGTTGTTTTCTATTAATGTGGAATCTTATAGCTACAACTTGTTTGCAGGCTGGTGACAATGTTGGTCTTCTTCTTCGTGGTCTTAAGCGTGGTGATGTACAGCGTGGCCAGGTTAGCATACCTAACTCTGAGCGGGACCCATATAAGTCTGATCCAAGTCATCTTTTATTCTATTCGTATCATTTGTGGTCTTTGAGCGAACTGGTGGATTGATATATTACTACTCTTGGTGCAATAACAATTCTTTGACCCTTTTATTGATGCTCCTATGTTTGTCATTTTTTGTACTGCTTTCAGGTGGTGTGCAAACCTGGTACCGTTAAGACGTACCAAAAGTTTGAGGCGGAAATTTACGTCCTTACAAAGGATGAAGGTGGTCGCCACACAGCCTTCTTGTCAAATTACAGTCCACAGTTCTACTTTAGGACTGCCGATGTCACTGGAAAAGTTGTGTTACCTGATGGCGTGGAAATGGTTATGCCTGGTGATAATGTAACTGCAGGATTTGAGTTGATATCACCTGTTCCCCTTGAGCCAGGTATGCTCCACCATTTTTGACATTTCGACCTTTTGGTATGGTTTTCTGCAATTGAAGTGAACACATTTGTTTCATTTTATGCTATTCAGGCCAGAGATTTGCGCTGAGGGAAGGCGGGAGGACAGTTGGTGCCGGAGTTGTTTCCAAAGTTTACAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009429

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009429&oldid=54252"