BGIOSGA009440

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009440, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009440, complete gene.

LocusTag

OSJNBB0096M04.45

Ensembl Transcript ID

BGIOSGA009440-TA

Ensembl Protein ID

BGIOSGA009440-PA

Length

5199

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40092717..40097915

Sequence Coding Region

40097463..40097915,40096651..40096857,40095916..40096252,40095627..40095788,40095314..40095413
,40095018..40095227,40094813..40094927,40094064..40094270,40093820..40093921
,40093404..40093526,40093189..40093323,40092717..40092830

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40092717..40097915 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40092717..40097915 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGATCTCGCCGTGGCGGCGCCGCCGCCGACGGACCTCTTCGGCGAGCCCATCGAGGCGCACCCGCCGTGGTTCAAGCCCGACTCCTTCCTCCGCCCCGACTTCGACCCGGACGCCTACGTCGCCGACCTCCGCTCCTACGTGCCCCTCGACAGCCTCGCCGCCGAGCTCCGCTCCCACCTCGCCTCCCTCCGCGCCGAGCTCGTCGGCCTCATCAACCGCGACTACGCCGACTTCGTCGGCCTCAGCGCCCGCCTCAAGGGCGTCGATGCCGCCGCCGCGCGCATGCGGCCCCCGCTCGCCGAGCTCAGGGACAAGGTCGCCTCCTTCCGCGCCGCAGCAGCCGCCGGGCTCGCCGCACTCCGCGCCGGACTCGAGCAGCGCGCGGCTGCCACGGCTGCACGGGAGCTTCTCGAGCTGCTGCTCGACACCTCCCACGTCGTCTCTAAGGTTGAGAAACTGATCAAGGAACTACCATCCGCCCCATCTGATTCATCAAATGTTGAGGCTGTTTCTGGTGATAAGGGCTACTCAGGCAACGTTGCCACACCACCAAACATGGATGATGGGACAGATGTTAGGGAGACACAAAGCATTCTCTTAGAAAGAATCGCCAGTGAGATGAACCGGCTCAAATTCTACATCAGTCATGCACAGAACCTCCCTTTTATTGAAAACATGGAGAAGAGAGCCCAAGGTGCTACAAAACTACTTGATGGTAGCTTGGAGCGTTGCTTTGTGGATGGTCTAGAACATCGTGATGACAAAGTAATATACAACTGTTTGCGTGCTTATGCTGCTATTGACAACACATCTTCAGCTGAAGAGATATTCCGTACAACAGTGGTGTCGCCGTTGATCCAGAAGATTGTTCCTCAAAACTATGCAAAAGTGGTTGCTGGGGTATCTTCTGATGACCTAGAAGATGATTATGAGCAGATAATGCAATGCGTAGAAAAAGATTGCAAATTTATTTTGGAGATATCTTCGTTGGCAAACTCTGGGCTTCATGTTTTTGATTTTCTGGCCAATTCAATACTCAAAGAAGTCCATTTGGCAATCCAGAAGGGAAAGCCCGGGGCGACCTCTCCTGGAAAACCTAAACAGTTCCTCAAAAACTACAAAGCAAGCTTAAGATTCCTTGATTTTCTGGAAGGTTACTGTTCATCTAAGCCTGCTGTAACAAAGTTCCGCTCCGAGCCTGCTTATGCCGATTTCATGCGACAGTGGCATGTTGCTGTCTACTTCACATTGAAATTTCAGGACATTGCTGGTGGTCTTGATTCTGTGCTTACAGCCACAATTACTCCTGCTGGAATGCATGACAATCAAGCGAAGCCGCAGACACTGTTGTTGAAACAAAGCGTTAAGCTCTTAGAAAGTTTGCAGGCCTGCTGGAGTGACGATGTTCTTGTTTTCTCCCACTCTGATAAGTTCCTCCGCTTGTCTTTGCAGCTTATTTCAAGGTATACAACATGGCTTTCTTCTGGTTTGGCTGCACGGAAAGCTTCTGATGGGGGCTCAAGTTCTCCTGCGGATGCTGAATGGGCACTATCTGTACCTGTGGAGGATTTCATTTATGTAATGCACGATGTAAATGCTGTAATTGGCGAGCTTTTGGAATCAGGCCAATTTGTGGAACATGTAAACCAATTGCTAGCATCATGCCCAACCGAAGTACTTGCTCTCGTGAAACACAGTATACTGCAAGCTGTTGAGCCTTTAAAGGAGTTGTTGCCTGCTATAATGAATGTCATGATTATGGTGATAGTTAAAAGGTCTAATGAGGACTTGAAGCACCTAAAGGGAATAACAGCAACATATAGAATGACCAATAAGCTTCCAGTAAGGCATTCTCCATATGTATCTGGGATTTTGCATCCACTTAAGGTTTTTCTTGAAGGTGACCGTATTCACTATTTATCAGAAGATGATAAAGCAAAGCTGCGCCGTGGATCGACAGATAAGATCACTTCAATTTATTATGACATGGTGTCTGAAGTAGTCACTGTGGCAAGGAAAACTGAATCATCATTGCAAAGACTACGTCAAGGTGCACAAAGACGAGTAGGAGCTAATACCGATACCTCGGATAACATCATTTCTGATACTGACAAGATCTGCATGCAGCTATTTCTTGACATTCAGGAATATGCACGGAATCTTCGTGCAATAGGAATAGATGCAAGGGAAATCGAAACATTCAGAGCTTTATGGCAGTGTGTTGCTCCTAGAGACAAACAGGATAACATCCAGTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MADLAVAAPPPTDLFGEPIEAHPPWFKPDSFLRPDFDPDAYVADLRSYVPLDSLAAELRSHLASLRAELVGLINRDYADFVGLSARLKGVDAAAARMRPPLAELRDKVASFRAAAAAGLAALRAGLEQRAAATAARELLELLLDTSHVVSKVEKLIKELPSAPSDSSNVEAVSGDKGYSGNVATPPNMDDGTDVRETQSILLERIASEMNRLKFYISHAQNLPFIENMEKRAQGATKLLDGSLERCFVDGLEHRDDKVIYNCLRAYAAIDNTSSAEEIFRTTVVSPLIQKIVPQNYAKVVAGVSSDDLEDDYEQIMQCVEKDCKFILEISSLANSGLHVFDFLANSILKEVHLAIQKGKPGATSPGKPKQFLKNYKASLRFLDFLEGYCSSKPAVTKFRSEPAYADFMRQWHVAVYFTLKFQDIAGGLDSVLTATITPAGMHDNQAKPQTLLLKQSVKLLESLQACWSDDVLVFSHSDKFLRLSLQLISRYTTWLSSGLAARKASDGGSSSPADAEWALSVPVEDFIYVMHDVNAVIGELLESGQFVEHVNQLLASCPTEVLALVKHSILQAVEPLKELLPAIMNVMIMVIVKRSNEDLKHLKGITATYRMTNKLPVRHSPYVSGILHPLKVFLEGDRIHYLSEDDKAKLRRGSTDKITSIYYDMVSEVVTVARKTESSLQRLRQGAQRRVGANTDTSDNIISDTDKICMQLFLDIQEYARNLRAIGIDAREIETFRALWQCVAPRDKQDNIQF</aaseq>

Gene Sequence

<dnaseqindica>1..453#1059..1265#1664..2000#2128..2289#2503..2602#2689..2898#2989..3103#3646..3852#3995..4096#4390..4512#4593..4727#5086..5199#ATGGCGGATCTCGCCGTGGCGGCGCCGCCGCCGACGGACCTCTTCGGCGAGCCCATCGAGGCGCACCCGCCGTGGTTCAAGCCCGACTCCTTCCTCCGCCCCGACTTCGACCCGGACGCCTACGTCGCCGACCTCCGCTCCTACGTGCCCCTCGACAGCCTCGCCGCCGAGCTCCGCTCCCACCTCGCCTCCCTCCGCGCCGAGCTCGTCGGCCTCATCAACCGCGACTACGCCGACTTCGTCGGCCTCAGCGCCCGCCTCAAGGGCGTCGATGCCGCCGCCGCGCGCATGCGGCCCCCGCTCGCCGAGCTCAGGGACAAGGTCGCCTCCTTCCGCGCCGCAGCAGCCGCCGGGCTCGCCGCACTCCGCGCCGGACTCGAGCAGCGCGCGGCTGCCACGGCTGCACGGGAGCTTCTCGAGCTGCTGCTCGACACCTCCCACGTCGTCTCTAAGGTTCGATCCTACTCCGCCGCTCCTGGTTAAACGCGAATGTAGCTTATTCCTATTAGCTAAATTTCCCCATCAGCACTGCATTGGTAGATCCGACTTTATATGGGATCTGTGACATCTGTCTGGAGGTCAACCATCAACCTTCTGAAACTGTGCCCTTCCAGTCCCCTTCCCATCGATGTTCGCCTGTTCATTTTCATGAATCATATGAAAGCTTATAGTGTTTGACTCTAGTTCAAACTAGGAAATTGGAGAGGTTTAGCACTTCCATTTTAATGCAGCAATAGTACATCATATTATTGCTGTGAACATTTTTTTGTCCCTGTATGCGGATGATCCATATGCTAACTCTGAGTATTATTTTATCCATGAATGTAGATGCAATGATGCATGTACATGAAGAAATTGGCGTGATTAAACCTGTCATAGTGCTAATTTCTACCATGTTAGAAAAATTGCCCTATCTTATGACTGATGGTCTTCTCAGATTATTTTGTCAAGGTTTCCATTGGTTCACAATTTGCAACATCATTCAATTGTATAAACCATCACCTAAAGGTGTTACTGTCAAGGCACCTGAAATCCACATTTTCCTGTTGTTCCTCCAGGTTGAGAAACTGATCAAGGAACTACCATCCGCCCCATCTGATTCATCAAATGTTGAGGCTGTTTCTGGTGATAAGGGCTACTCAGGCAACGTTGCCACACCACCAAACATGGATGATGGGACAGATGTTAGGGAGACACAAAGCATTCTCTTAGAAAGAATCGCCAGTGAGATGAACCGGCTCAAATTCTACATCAGTCATGCACAGGTTTGTGACACTAACTCACCAATAAATACTGGTCCATTTGCACCTCTCACTCACATACCTTCTCTTTTTCTGTTCCGTTGCTGAGAAAAACCATTAGGGAAAAATTGTAACACAAAAATGACATTAGTTGTTTCTCCGGAAAGGTTTATTTCTGTGTCACAATTGACCATTGAAAGTGTAGTATACACAGCAATACAACGATGTGATATAACATCTTGATTAATAACTATAAGAAAAATGTCTACCCACATGTCATAGATTTGGTTGTCGCAAACTGCTGAAGTGTCAACATGGTTTCATATTGGTAGCTTTTGTTTTATTGCTACCTGATGCTACCTTTTGCATCTCAGTGCCACTTATATTTATGATTCTTATCCTGTTACATTATGGCAGTACAGAACCTCCCTTTTATTGAAAACATGGAGAAGAGAGCCCAAGGTGCTACAAAACTACTTGATGGTAGCTTGGAGCGTTGCTTTGTGGATGGTCTAGAACATCGTGATGACAAAGTAATATACAACTGTTTGCGTGCTTATGCTGCTATTGACAACACATCTTCAGCTGAAGAGATATTCCGTACAACAGTGGTGTCGCCGTTGATCCAGAAGATTGTTCCTCAAAACTATGCAAAAGTGGTTGCTGGGGTATCTTCTGATGACCTAGAAGATGATTATGAGCAGATAATGCAATGCGTAGAAAAAGATTGCAAATTTATTTTGGAGATATCTTCGTTGGGTAATTATGATAGACGAATTTCATTAAAAAGCTGCATCATTGCTTAGTATTTTTTAAGTTGAATACTAAATGCTGCATAAGGACTTAGATTGACACATCATCTAATTTTCTATCGATTGATTTGCAGCAAACTCTGGGCTTCATGTTTTTGATTTTCTGGCCAATTCAATACTCAAAGAAGTCCATTTGGCAATCCAGAAGGGAAAGCCCGGGGCGACCTCTCCTGGAAAACCTAAACAGTTCCTCAAAAACTACAAAGCAAGCTTAAGATTCCTTGATTTTCTGGAAGGTATTGCTAAATTATGTTGCATTGTGATTATTGTTTTGTATTTAACCAGCTAAGCCTACTACAATAAATACTATGCTTGCTCGCAAGTTATGCTGGTTTATACATTTGGGACAGCCATTATATAGGACTAACAAGGAATGTGGTTAGACTGGGTTAAAGATATACATATATGACTATTGGGAGTTGCTATTGATTGAATATTTGGTCCTGTAGGTTACTGTTCATCTAAGCCTGCTGTAACAAAGTTCCGCTCCGAGCCTGCTTATGCCGATTTCATGCGACAGTGGCATGTTGCTGTCTACTTCACATTGAAGTAAGCATAAATATTTAGGCTATGCTGCTGTCAAATGCTCTTCAGAACTTCATTTCTAACTTGACTTCAACTGGTTCAATCATAAGATTTCAGGACATTGCTGGTGGTCTTGATTCTGTGCTTACAGCCACAATTACTCCTGCTGGAATGCATGACAATCAAGCGAAGCCGCAGACACTGTTGTTGAAACAAAGCGTTAAGCTCTTAGAAAGTTTGCAGGCCTGCTGGAGTGACGATGTTCTTGTTTTCTCCCACTCTGATAAGTTCCTCCGCTTGTCTTTGCAGCTTATTTCAAGGTATAGCTACTGCAGAGGATTCTTTGCCTTATCTTTTATGATTTAACCTATGGTGATTGACCCTTTTTGTATTCTACATTTTACAATAAGGTATACAACATGGCTTTCTTCTGGTTTGGCTGCACGGAAAGCTTCTGATGGGGGCTCAAGTTCTCCTGCGGATGCTGAATGGGCACTATCTGTACCTGTGGAGGATTTCATTTATGTATGTCATGTCTACAATACTCCTTGAATTCCAAGTGTGTTATTTCAGTCATCTGAACCTACTGCCTTTCATCCTTCATCATGAACTTTGTGGCTTAAGACTGAAATAGTATTGTCATCTTAGCCAGTGACATTGAGATGGTTGCATAGATTAGCAATAATTTGAGACTCACACTAAGGTTTAAGACTATAAGTGCTTAGGAGGGCATCCCAAAGATGACACCTTGCACTTCTAGCCCACAAACATTCCAGGAACACATATACTGTGGTTACTGGTTAGTTAGAAAGTCTACAGTTGGTAGCGGTGTAGCATATCAGGTATGACTTGTCCCTTTTTTTTTCATGTGTAAACTGGAAATAGTTGTTCGGCTTGTTCTTCATGATGTGCTCTAGATTGGAAGCTAGTCAATATTGATTATTACGTAATCTTACCCATTATTTTGGCCCCTGATTCTCATATTTCTTATAAAATTTGAAACATAGAAGATTATGGCCATCAGGCATATTTGTGAATTGCATTTAAATTCTGTATTTGATGCACAGGTAATGCACGATGTAAATGCTGTAATTGGCGAGCTTTTGGAATCAGGCCAATTTGTGGAACATGTAAACCAATTGCTAGCATCATGCCCAACCGAAGTACTTGCTCTCGTGAAACACAGTATACTGCAAGCTGTTGAGCCTTTAAAGGAGTTGTTGCCTGCTATAATGAATGTCATGATTATGGTGATAGTTAAAAGGTCTAATGAGGTGAGTACACCTAAGTCAGCAGAAGAGAAGCAATGTCATCATTTCTTACTGTATCTGTGGTTCATCACTCGTATGGTACAATAAGACAATTTTGAGTCATGGTCCTTCTGTTCTTACCAACTATATTTCTGGTTGATTGTAGGACTTGAAGCACCTAAAGGGAATAACAGCAACATATAGAATGACCAATAAGCTTCCAGTAAGGCATTCTCCATATGTATCTGGGATTTTGCATCCACTTAAGGTGAATGGACATCCTGTTTTACTTCTCTGCTTTATGATTTATGTTTCTCAAAAGTGAAGCATCAAAAGTTAACTACTTAACTGGTAGCGTCTATGTCCTAATGGCTGCATTCAGTATGTGTTCTTGGCGATTTTTAAGTGCCATGGTCAGTATCTAGTACTCATTAGTCTGATCGTTATCACCCTCAAGAATAACTTATGTTTTGCCATTTTGCAGGCCCCGATATTTAGAAACATGTGTTTATGCTCTTTTTGCCTCCATATTTCATATGTGATGTTCCTCTGTTCTTGTAGGTTTTTCTTGAAGGTGACCGTATTCACTATTTATCAGAAGATGATAAAGCAAAGCTGCGCCGTGGATCGACAGATAAGATCACTTCAATTTATTATGACATGGTGTCTGAAGTAGTCACTGTGGTAAGTAAGGAATGCTTAACTGCTTATGAGAGCTCATATCTGCTTATTGGTGAATTAAACCATTTTTATTGAATATAAAGGCAAGGAAAACTGAATCATCATTGCAAAGACTACGTCAAGGTGCACAAAGACGAGTAGGAGCTAATACCGATACCTCGGATAACATCATTTCTGATACTGACAAGATCTGCATGCAGCTATTTCTTGACATTCAGGTTTGATATCTGTCCTTTAATTTTATGCTGATAAGGGACATATTATATATAACGGATATAAGATTTATTTTAGGGTGTAAATTTTGCATCAAATGATTTTTTTTAAGAGAGTCATTGCCTTTTGGTTTCATCAAAGACCCAACTAGTGCTTATGGTTGGCTTATTCAACCTTACCATTTTCTGTGGAAAACAACTTTAGCATGTAATCTGAATGTTTCTATGTTGGCCATCCAATACATTTTTTTTTGCAAGGACCAATGGGTATTAGTTATATGATCAAACATGATACCTGTTTATGATGGATGCACTGCACCACATCTGACATTTCTTTTTTTTTTTGGTTCTTCTTATTATGCAGGAATATGCACGGAATCTTCGTGCAATAGGAATAGATGCAAGGGAAATCGAAACATTCAGAGCTTTATGGCAGTGTGTTGCTCCTAGAGACAAACAGGATAACATCCAGTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009440

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009440&oldid=54263"