BGIOSGA009445

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009445| Description = BGIOSGA009445| Definition = Oryza sativa Indica Group BGIOSGA009445, complete gene.| tag = | tid = BGIOSGA009445-TA|...")
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Gene Name

BGIOSGA009445

Description

BGIOSGA009445

Definition

Oryza sativa Indica Group BGIOSGA009445, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA009445-TA

Ensembl Protein ID

BGIOSGA009445-PA

Length

3444

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40031728..40035171

Sequence Coding Region

40034707..40035171,40033789..40033920,40033050..40033386,40032760..40032921,40032677..40032711
,40031728..40031952

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40031728..40035171 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40031728..40035171 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGATCTCGCCGTGGCGCCGCCGCCGCCGCAGCAGCAGCCGACGGACCTCTTCGGCGAGCCCATCGAGGCACACCCGCCGTGGTTCAAGCCCGACGCCTTCCTCCGCCCCGACTTCGACCCGGACGCCTACGTCGCCGACCTCCGCTCCTACGTGCCCCTCGACAGCCTCGCCGCCGAGCTCCGCTCCCACCTCGCCTCCCTCCGCGCCGAGCTCGTCGGCCTCATCAACCGCGACTACGCAGACTTCGTCGGCCTCAGCGCCCGCCTCAAGGGCGTCGATGCCGCCGCCGCGCGCATGCGGCCCCCGCTCGCCGAGCTCAGGGACAAGGTCGCCTCCTTCCGCGCCGCTGCGGCCGCCGGGCTCGCCGCACTCCGCGCCGGCCTCGAGCAGCGCGCGGCTGCCACGGCTGCACGCGAGCTTCTCGAGCTGCTGCTCGACACCTCCCACGTCGTCTCTAAGGGCTACTCAGGCAATGTTGCCACACCACCNAACGTGGAGGATGGGACAGATGTTAGGGAGACACCAAGCATTCTCTTAGAAAGAATCGCCAGTGAGATGAACCGACTCAAGTTCTACATCAGTCATGCACAGAACCTCCCTTTTATTGAGAACATGGAGAAGAGGGTCCAAGGTGCTACAAAACTACTCGATGGTAGCTTGGAGCGTTGCTTTGTGGATGGCCTACAACATCGTGATGACAAAGTAATATACAACTGTTTGCGTGCTTATGCTGCTATTGACAACACATCTTCAGCTGAAGAGATATTCCGTACAATAGTGGTGTCACCGTTGCTCCAGAAAATTGTTCCTCAAAACTATGCAAAAGTGGTTGCTGGGGTTTCTTCTGATGACCTAGAAAATGATTATGAGCAGATAATGCAATGTGTTGAAAAAGATTGCAAATTTATTTTGGAGATATCCTCATTGGCAAACTCTGGGCTTCATGTTTTTGATTTTCTGGCCAATTCAATACTCAAAGAAGTCCATTTGGCAATCCAGAAGGGAAAGCCTGGGGCCACCTCTCCTGGAAAACCTAAACAATTCCTCAAAAACTACAAAGCAAGCTTAAGATTCCTTGATTTTCTGGAAGTTAAGCCTACTACAATAATGTTGCTTGCTGGCAAAGCAACTTCCAATGTCAACTTTGATGATCAGGCTCAGGCATCATTCATTCAGGCAAGGCAAGTCCAGCTCAAAAACAGCTTTCCATTGCAGACCAGTGCAGCTCATTTGGTTTGCGCGTTCTACACTTGTAGTCACAGCATCTATCCAGCTGCCAGCAAGCAAATGCCTCCTGCTTGGCCATGTGACTGCGATGTTCTTGCTGCCTCTCGCTTTCTGCGTGGCTAA</cdnaseq>

Protein Sequence

<aaseq>MADLAVAPPPPQQQPTDLFGEPIEAHPPWFKPDAFLRPDFDPDAYVADLRSYVPLDSLAAELRSHLASLRAELVGLINRDYADFVGLSARLKGVDAAAARMRPPLAELRDKVASFRAAAAAGLAALRAGLEQRAAATAARELLELLLDTSHVVSKGYSGNVATPPNVEDGTDVRETPSILLERIASEMNRLKFYISHAQNLPFIENMEKRVQGATKLLDGSLERCFVDGLQHRDDKVIYNCLRAYAAIDNTSSAEEIFRTIVVSPLLQKIVPQNYAKVVAGVSSDDLENDYEQIMQCVEKDCKFILEISSLANSGLHVFDFLANSILKEVHLAIQKGKPGATSPGKPKQFLKNYKASLRFLDFLEVKPTTIMLLAGKATSNVNFDDQAQASFIQARQVQLKNSFPLQTSAAHLVCAFYTCSHSIYPAASKQMPPAWPCDCDVLAASRFLRG</aaseq>

Gene Sequence

<dnaseqindica>1..465#1252..1383#1786..2122#2251..2412#2461..2495#3220..3444#ATGGCGGATCTCGCCGTGGCGCCGCCGCCGCCGCAGCAGCAGCCGACGGACCTCTTCGGCGAGCCCATCGAGGCACACCCGCCGTGGTTCAAGCCCGACGCCTTCCTCCGCCCCGACTTCGACCCGGACGCCTACGTCGCCGACCTCCGCTCCTACGTGCCCCTCGACAGCCTCGCCGCCGAGCTCCGCTCCCACCTCGCCTCCCTCCGCGCCGAGCTCGTCGGCCTCATCAACCGCGACTACGCAGACTTCGTCGGCCTCAGCGCCCGCCTCAAGGGCGTCGATGCCGCCGCCGCGCGCATGCGGCCCCCGCTCGCCGAGCTCAGGGACAAGGTCGCCTCCTTCCGCGCCGCTGCGGCCGCCGGGCTCGCCGCACTCCGCGCCGGCCTCGAGCAGCGCGCGGCTGCCACGGCTGCACGCGAGCTTCTCGAGCTGCTGCTCGACACCTCCCACGTCGTCTCTAAGGTCTGATCCTACTCAGCTCTTGGTTAGACGCGAATGTAGATTATTCCTGTGATCTAAATTTTCCCATCAGAACTGCATTGGTAGATCCTACTCCTTCCGTCCCCTAATATAAGGGATTTTGACATTTTGCCGTCTTATTCAAAAAATTTTGGAACTATTTATTTATTTTCTGTGACTTACTTTATTATCCAAAGTACTTTAAGCACACCTTTTCGTTTTTTATATTTGCACAAATTTTTTTGAATAAGACGAGTGGTGAAACAGTACAAGCAAAATGTCAAAATCCCTTATATTATGGAACGGAGGGAGGACTTTATATGGGATCTGTCTGGATGTCAACCATCAATCTTCTGAAACTGTACCCTTCCAGTCCCCTTGCCTTCAATGTTCGCCTGTTCATTTTCATGAATCATATGAAAGCTTATATTCGAACTAGGAAATTGGAGAGGTTTAGCCCTTCTATTTGAATGCAGCAATAGTAGATCTTATATGTACATATTATTGCTGTGAACATTTGTTTGTCCCTGTATGCGGATGATCCATATGCTAACCCTAAGTATTATTTTATCCATGAATGTACATGAAGAAATTGGCATGATTAAACCTGCCATAATGCTAATTTCTATCTTGTTAGAAAAATTGCCCTATCTTATGACTGATGGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAACTGATCAAGGAACTACCATCCGCCCCATCTGATTCATCAAATGTTGAGGCTGTTTCTGGTGATAAGGGCTACTCAGGCAATGTTGCCACACCACCNAACGTGGAGGATGGGACAGATGTTAGGGAGACACCAAGCATTCTCTTAGAAAGAATCGCCAGTGAGATGAACCGACTCAAGTTCTACATCAGTCATGCACAGGTTTGTGACACCNACTCACCAATAAATACTGGTCCATTTACACTTTTAACTTACATATACCTTCTCTTATTCATTGTTTTGTTGCCGAGAAAAACCATTAGCAAGAAATTGTAACACNAAAACGACTTTAGTGGTTTCTTGGGAAAGGTTTATTTCTGTGTCACCATTGACCATTGAAAGGGCAGTATACACCACTAAACTACAGTTTAATATAACATTTGGATTAATACTGTAAGAAAAAAAAAGTCTAGTCATGTGTCATAGATAGGATTGTTGCAAACTCAAACTGTCAATATGGTTTCATATCAGTAGCTTTTGTTTTATTGCTACCTGATGCTACTATGCACATATCAATGCAACTTATATTTATGATTCTTATTCTGTTACATTATGGCAGTACAGAACCTCCCTTTTATTGAGAACATGGAGAAGAGGGTCCAAGGTGCTACAAAACTACTCGATGGTAGCTTGGAGCGTTGCTTTGTGGATGGCCTACAACATCGTGATGACAAAGTAATATACAACTGTTTGCGTGCTTATGCTGCTATTGACAACACATCTTCAGCTGAAGAGATATTCCGTACAATAGTGGTGTCACCGTTGCTCCAGAAAATTGTTCCTCAAAACTATGCAAAAGTGGTTGCTGGGGTTTCTTCTGATGACCTAGAAAATGATTATGAGCAGATAATGCAATGTGTTGAAAAAGATTGCAAATTTATTTTGGAGATATCCTCATTGGGTAATTACGATTTACACATTTCATTATAAAGTTCCGTCATTGCTTACTATTTTGTAAGTTGAATACTAAATGCTACATAAGGACTTAGATGACGCACATCATCTAATTTTCTATGGGTTGATTTGCAGCAAACTCTGGGCTTCATGTTTTTGATTTTCTGGCCAATTCAATACTCAAAGAAGTCCATTTGGCAATCCAGAAGGGAAAGCCTGGGGCCACCTCTCCTGGAAAACCTAAACAATTCCTCAAAAACTACAAAGCAAGCTTAAGATTCCTTGATTTTCTGGAAGGTATTCCTATTTATGTTGCAATGTGATTATTGTTTTGTATTTCACCAGTTAAGCCTACTACAATAATGTTGCTTGCTGGCAAAGTATGATTAATACTACAAGTGGGACAACCATCATATAGGACTAACAAGGAATGCGGTTAGATTGGGTTAAAAATCTATGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGACTGATGATAAGCTGGCTAATTAATCATGTTGATTTTCGTTTACAGGGGTAATTAAGGAAGGGAATTGGCTTGTCAAGTTGTCATAGTCAACAAGAGTACGGGATGAGATGAGCAGAGCAGAGCAGAGCTTTCAGTGGCATTGAAAACATGGTTGTTTGGGCTCCATAAAGAAGTCCCAAAAGAAGCCATTGCCTACTGTCCATTCCACTTGGCCGGACAGCGAGCACATTATAGTATGGCGTTCTTGGTGATTTGTTTGCGTGCAAAAATCATTTGTTGACCAGGTACTGTACCATTCGTTTTCTGCTACCACTATACTAGTATTTCAAGTACTCCAGTGTGTTGGGTATGTTAGTAGCAACATGTTTTGGGTATGAAGTACTAGCATGAACAATGACGTGTATATAATTCAAGTACTACACGGTATCAACTATACCTTTATCTTTGGAAAATGGAAGGTGTATTCTTTACTCGTGTGGTCAGTGCTCTTCACTCTCGAGATACTCTCCTACTGGCACTATCGACTATCGAGTGACATGAAGAAGGGTAGTACTGTAGTATTAATAACTTAACTTTACGACATGACAGGCAACTTCCAATGTCAACTTTGATGATCAGGCTCAGGCATCATTCATTCAGGCAAGGCAAGTCCAGCTCAAAAACAGCTTTCCATTGCAGACCAGTGCAGCTCATTTGGTTTGCGCGTTCTACACTTGTAGTCACAGCATCTATCCAGCTGCCAGCAAGCAAATGCCTCCTGCTTGGCCATGTGACTGCGATGTTCTTGCTGCCTCTCGCTTTCTGCGTGGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009445