BGIOSGA009456

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Revision as of 09:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009456| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009456, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009456

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009456, complete gene.

LocusTag

OSJNBA0032G11.21

Ensembl Transcript ID

BGIOSGA009456-TA

Ensembl Protein ID

BGIOSGA009456-PA

Length

2899

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39901475..39904373

Sequence Coding Region

39904146..39904373,39903900..39904059,39903687..39903748,39903172..39903331,39902972..39903092
,39902435..39902516,39902233..39902345,39901974..39902052,39901839..39901889
,39901475..39901558

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39901475..39904373 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39901475..39904373 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGCGGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCTTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MLAAAAAALRPAPTTAAFSPSTARSPPPTLLSFAPPRSHQRFHLSATAEGAGTTAAQEGASASASAPPVDEARLAQFAADWQAARAERDQGKILKLQVIRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGSSISVKVVEVNEEERKLVFSEKDASWFTHSSLVKIGAIYDGIVGSVFHYGAFVHLRFPDGNYHLTGLVHISEVSWDLVQDVRDFLNEGDTVKVIVVNIDMEKSRIALSIRQLEEDPLLETLDKVIPLEADQSPSAGIISSDSSPSEADLLPGLDGICNELLQEDGITDVQFGRRALEKRVVSQDLELWLSSVPAKDNQFKLLARAGRQVQELYLTTSLDQEGIKKAVQRVLGRVP</aaseq>

Gene Sequence

<dnaseqindica>1..228#315..474#626..687#1043..1202#1282..1402#1858..1939#2029..2141#2322..2400#2485..2535#2816..2899#ATGCTGGCGGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCTTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGGTGCGGAGATGTTTTGTTCGTGCTGTTTTTGGTGCGATGTTGACGCGCGTGTGATCGAGTGAGGGTTTCGTGTTGTTTGGATGTAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGGTAGTCAGTTTCTCTAGTTTGAGTTGTTTGCAGAATTTGTCCAGATTTTTGAACCAGCTCTAGCTGCAATTGATCGCCGGATTAAGAGGTGATTGCAGCTGTGGGCTACCGTAACTGAACTCATGGTGGATGTATGGTTTTTTCCTTGTAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTAATTAAGAGGCTTCAATTACCTTTTGAGCTACCAATTAGATTATGGTACTATACCATGCAGTAGTATAAACACATGCTGGTTTTGGATCAAAACGCTGATCAATGTTACTTTTAGTTTGCTTGTGTGGCGGAATTTCAGTATTAAACTGGGTGTCCCTCTCCAAGGAACTGTGATATTCTTTAACTTTGTTTTCTAAACTGCATTATGATTTTTTTTCAAGCACATTCTGGCAAAGTTGTATCATTGGCTTCTCAATTCTCTATTACTATGGGTACAATCTAAGAGCGGGCACCAGATTGTAGGATTCGAACTTTACACATTTTTCTTCAGAAACTGAAGCTAATTACTTTAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGTACCCATTGGCAACACCCCTTGTCATTTTTGTTGGTAAATGTTTTGTTGATTTTCTGACAAAATCTATCCTCAAACAGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGTAAGTATCTAATACTTCTTTACTGTCTTCCTCCACAATTGTCAGCATGTGTATTCGCAATGTAGTTTCTCGTGATCTCATTCCATACTTTTTCAAGAAAGTTTGCAATTATATAATCAATGTTGACTGTACCAATGAAAAATAGCATATGTTTAATTGAATCTAGCGATGGAGAATGGCGCAATACACCTTAAATCTATATAGATTAGGATTTAACGATGCAATAACTATTGAGAACACAGATTGTCTTTAAGGAATACCAAGTTGATGCATTGAAATAGATCACTTATGACTCTTGAGGGCTGATGAATAAAATGAGAGGAGTTTATGATCTTTTTTTTTTCCTATCATTGCTTTCTTCGCAATAGGGCAAATCAGCATATGCTGGAAGAATTATCATGAATCAGAAAATTATGTTACATAATCTGATACTGATGCATTTCCTTCACAAATAGGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGTTAGTTTGTCGAAAGCACGTGTCTTTGTGGCAGGTTATTTAGCTTTGTTCTTTTAAAGGTCAACTCATGCATTAATATTGGTTTATAGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGGTATGATTTCTGTTTGTGTGTTTTTTTTTTTTGGTGTATGGTTTTTTGATGTTGATGTACTACTTTATGTGCCCAGTAGCTCTTCTTGACTAGAGAACAGTTTTGTTAACCAGGAGGGAACCCATGAATAGGTTTTTACGTTGCAATCTCCATGTTTTAATCAGTTCTATTTCTTCACAGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTATGATCCAAAATGTCTCCAATTTAACCAGTCGAAGCTCACAAGATAGAAACATGGACTGATGTGTTGGATCTCATTGTGCAGGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTTAGTTTCTTCTTGATATAGCACTGTTTTCTTGTTATAAGGAGTTTCATTAGGCAAGGATTGATGTTTAGTCGGTTTTCAGTCCCAACTGAACAGAAAACAAAGGTACATCCTGTAAAACCAAAATATCAAACAAGTCTTCAAAATGGTTACACCGGAAGTTAGTACGACAAGTTTTGTGAAAGATTGTAATGGTTGTCTGATGAGCGTGCCGTTGGAATAATTGTTGTAGTTGTGTGACAGAGTGTAAGTAAAAAATTATAATCCTTTAAACTGGCAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009456