BGIOSGA009469

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Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009469| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009469, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009469

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009469, complete gene.

LocusTag

OSJNBA0075M12.19

Ensembl Transcript ID

BGIOSGA009469-TA

Ensembl Protein ID

BGIOSGA009469-PA

Length

4866

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39751160..39756025

Sequence Coding Region

39755873..39756025,39755431..39755523,39755285..39755344,39754932..39755204,39753766..39753840
,39752776..39752832,39752483..39752623,39752364..39752414,39752182..39752277
,39751785..39751868,39751581..39751683,39751160..39751248

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39751160..39756025 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39751160..39756025 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTATTCTGGACTAAGGCATGGCGGCGTTGGGAGCTCCTCTCGGCCGGGACATGGATTCAAGGGCCCGGCTAGTTCGGTTGAATGTCTAGGAAGGGAGATGCTGGAAATGCAATTGAGGGATTCCAAACCAGATGTTGGTGATGAAAAGAACACTGAACGAGATGTAGTCGACGGCTCTAGCGCTGAAGCTGGTCACATAATAGCTACTACGATCCGTGGCCGAAATGGTCTACCTAAACAGTCTGTCACTTATATTGCTGAGCATGTGGTCGGAACTGGTTCTTTTGGGGTTGTATATCAGGCCAAATGTCGAGAAACAGGAGAAATTGTTGCCATAAAAAAGGTTCTTCAAGATAAACGTTACAAGAACAGGGAATTGCAAATTATGCATATGCTGGATCATCCTAATATTGTTGGTCTTAAGCATTACTTCTTCTCAACCACTGAAAGGGATGAACTTTACCTCAATCTTGTCCTTGAGTATGTTCCAGAGACAGTAAACCGAATTGCGAGACAGTACAGCAGAATGAATCAACGGGTGCCCCTCATTTATGTCAAATTATACACTTATCAGATATGCCGAGCACTTGCTTACATACATAACTGTGTTGGCATCTGCCACCGTGATATAAAACCACAGAATGTTCTTGTTAACCCACATACACACCAGCTCAAAATATGTGATTTTGGCAGTGCAAAAGTTTTGGTCAAAGGAGAGCCAAATATCTCCTACATATGCTCAAGATATTACAGGGCACCAGAGCTCATATTTGGTGCAACTGAATATACTACTGCCATTGATTTGTGGTCTACAGGCTGTGTCATGGCAGAGCTTCTGCTTGGACAGCCTCTGTTCCCTGGGGAAAGTGGAGTTGATCAGCTGGTCGAGATTATCAAGGTTTTGGGTACTCCAACAAGGGAAGAGATCAAGTGCATGAATCCGAACTACACGGAGTTCAAATTCCCTCAAATTAAGGCTCATCCATGGCACAAGGTTTTCCAAAAAAGGCTTCCACCTGAAGCAGTGGACCTTGTAAGCAGGTTTCTGCAATACTCACCAAATCTTCGGTGCACCGCTATGGAAGCCTGCATGCACCCTTTCTTTGATGAGTTGAGAGATCCAAACACTCGTCTACCTAATGGGCGTCCTCTTCCTCCTCTCTTCAACTTCAGAACACAAGAGCTAAATGGCATCCCTCCAGAAGCCATCGAACGTCTGGTTCCCGAGCATGCGAGAAGGCAGAGTTTGTTCATGGCGCTGCGCACCTAG</cdnaseq>

Protein Sequence

<aaseq>MAYSGLRHGGVGSSSRPGHGFKGPASSVECLGREMLEMQLRDSKPDVGDEKNTERDVVDGSSAEAGHIIATTIRGRNGLPKQSVTYIAEHVVGTGSFGVVYQAKCRETGEIVAIKKVLQDKRYKNRELQIMHMLDHPNIVGLKHYFFSTTERDELYLNLVLEYVPETVNRIARQYSRMNQRVPLIYVKLYTYQICRALAYIHNCVGICHRDIKPQNVLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDLWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFQKRLPPEAVDLVSRFLQYSPNLRCTAMEACMHPFFDELRDPNTRLPNGRPLPPLFNFRTQELNGIPPEAIERLVPEHARRQSLFMALRT</aaseq>

Gene Sequence

<dnaseqindica>1..153#503..595#682..741#822..1094#2186..2260#3194..3250#3403..3543#3612..3662#3749..3844#4158..4241#4343..4445#4778..4866#ATGGCCTATTCTGGACTAAGGCATGGCGGCGTTGGGAGCTCCTCTCGGCCGGGACATGGATTCAAGGGCCCGGCTAGTTCGGTTGAATGTCTAGGAAGGGAGATGCTGGAAATGCAATTGAGGGATTCCAAACCAGATGTTGGTGATGAAAAGGTAGGTTTCTGTTCGTGTTTGTTTGTCACTGAGTGAACTAGTGTTGATGTAGGATGAAGAGTCACCTGTCACCAGAATCAAACTCTTGTTTCTGTGGTTCCTGTTATTTTGTTCACCTCCTGTAGCAATGAGCCACTGTGCCTTTCTGAGAAAGTAGTAAATAATCACTGCATAACTTCAAAAAATTTGTCTGTAATTTGCTACTCTGCAAATTTGACATGCTGTCCACCCTAGAAAAGCATGGTTTTATGACACTGCTTCATACTTCTACGGCTCATGAATATTCACAGAAAGCCTACGGAAATATGAACCAAGACTGCACTTTGGTTTACCAACAATTCATTTGCAGAACACTGAACGAGATGTAGTCGACGGCTCTAGCGCTGAAGCTGGTCACATAATAGCTACTACGATCCGTGGCCGAAATGGTCTACCTAAACAGGTAAAAATAGTTTCGCTTTCATCCTTGCAATTTGTGATGTTTGGCCATGAAACAATGCTGATAAAGTGGTTATGGTAATGGAACAGTCTGTCACTTATATTGCTGAGCATGTGGTCGGAACTGGTTCTTTTGGGGTTGTATATCAGGTAAGCCTGTGGCTTTTTCATTGTAAAAATTTCTCTATGTGACTGTGAAAGGCAAATAACCTGTTCGTGTCAACTCTTAGGCCAAATGTCGAGAAACAGGAGAAATTGTTGCCATAAAAAAGGTTCTTCAAGATAAACGTTACAAGAACAGGGAATTGCAAATTATGCATATGCTGGATCATCCTAATATTGTTGGTCTTAAGCATTACTTCTTCTCAACCACTGAAAGGGATGAACTTTACCTCAATCTTGTCCTTGAGTATGTTCCAGAGACAGTAAACCGAATTGCGAGACAGTACAGCAGAATGAATCAACGGGTGCCCCTCATTTATGTCAAATTATACACTTATCAGGTCAGCCCTGATTTGTTGTCTATTTTTCTGAGTGACTCGCCTTTGCATTGGACCAGTAACCTTTAGGAAATAATATAATTTTCCATCTCATGCCCCATTCCAAACCGATTGCTTCTATAGATTCAAGAGAATAAACTCTTTGGATGTCCTGTCATAATCTATTTTTGGTTATCTTATTTTCGAGGAACAAGGGGGCACATTTGCAAAGTTCTTAATTTTTCAGCTGGGTTATCCAGTGCCTTCGGGCATGCATGCCACACTAGAACTTATCAATAGTTGATGCATATTTTTTTCCTGTAAAATATCAATGGACCATGTTCAACCATCTGCAAGGGAGCACTGAGTGCCATAATTTTTATGTAATGTAGGCATACATGCTCTCCCAATTTGTTTGCATGTTCTAAAACCTGTCATGTGAAGCATGGTTCAAACTTGATGGCAGTCATGTGTTGTCCTTGTGTCCACTCGAGTATTATCTTCAAGTAGCCCAGGACTGCACTGGAACGTTTAGAAGTTTTGGATTAATGATTCAGATTGTTTTCTTCCATGGAGAATCGGCATTTAAACATCTACTCAAGCCAGCTTGTCAATTTTTCTGACTTCATATGTATGTTCAACAGCTTGCTTCTTGTTTGTCTAGCTAAACATCAAGCGCTATCTACTTATCTAATAATTTTTCTGTCATATGATTTGAGATGATAGTGAAATATAACATTTTTCATGAGATAAGTAGCACATCATTTTGGCCGGTAAAAAAATTCTGAGATTTGATTGCGTGACTTCAATCTACTCTCTAGGAACCAGCAGAGATCATTTACTGTTTAACTGAAAATTTTCACATTAGTGCATGTAATTGTTTATATACTCTTAACTAATGGTTAGATTTATCTATTTACTCCAGTTAGAATTCTAGCTAATGAGTTGTTCTATACACCTGTTTGCTCTCTGTAGCTGTTGAAATAAATTCTCCCAACATGCACTAAACCGTGCTTCCAGTTGTATTTTTCTTTATGATATCATATCTTAAGACAAAATTTGATTATTTATTAACTACTAAGTCATCTAAATCGTTGTTCCTGTTGTCTTTGCAGATATGCCGAGCACTTGCTTACATACATAACTGTGTTGGCATCTGCCACCGTGATATAAAACCACAGAATGTTCTTGTGAGATTTTAACCCCTTTATTTTCTATACTTAATATGTTTTGCTGTACAGATCCTCAAATATAAATTAATGGGATCATGGAAAATAAAACATAACTAATTGGTACATGAAGGAGTTGCATATATGTAACATTGTCTGCTTTTAACTATATGAAATATTCACAGCAAACTCTATATCCTGTAGAGAAGGTGCATAATGTTGGTAATAAAGCTTTGCATTTTTATGTATCTGCATTTCCCTGAAAATATTAGTCATAATTCATAAATGAACTTGGGCAATCTTATTTTCTCCTTTCATTCCATTGAGCTTTCATATGTTTACTGTTGCATATTTCTGAAGAGCATAAAGTATATTGCTCATTGGGACTGAGATTCTGGTTCATATGTATCCAAATATCTTAATTATTGGTTGGTTCCACATACATGATATAACATTCTGAAACTGAAAAAAGCAATCCACATGTGCATTATTTAGTTTCCTATAGCTGAGCCATCCCATGTGCATTGTTTGGTGCCGATGCTACATGTTATCAACTTATCATATTATCAAACTGTATGTTACTGTTTATATTGTTTTGCTTGTTGATGATATTGGCTGATGGAAGAGCACTTTGGTTATACATAGTCATTTTTGTTCTTTATTGAAAGAGAAAATATCCATGGCTCCACATATTTGGATTGCATCAACTACCACTAGGTCCACTACTAGGACTATGATGCCAAATTATTTGACATATAGAACAGCAGGATTTAAGATTAAGTCTCATATATAAGATTATTAAAACGGTATAAACTGCACATATAAAGGAACATTTATGCAGACAAACTGTTAGTACTTCAATTATTTATTTTAAAACCGTGATCATGCATGTACTTACAGACTGAAATTCACTAAGTTTTGATGGTACTAATAAGGTCTTCCTTCGCACTGTAGGTTAACCCACATACACACCAGCTCAAAATATGTGATTTTGGCAGTGCAAAAGTTTTGGTAAGTTCTGAATTTGGCAGAAATTTAAATTCACAAGCATTTCTGTTTTCTGAATGGATACACTGGGTTTTCTTGCAAGGAAATGTGAACTTAGGCAGGTAGCCTACACATGATAGTCTTAAATTGCAGCTTTTTCCCCGCTGAATGTGCAGGTCAAAGGAGAGCCAAATATCTCCTACATATGCTCAAGATATTACAGGGCACCAGAGCTCATATTTGGTGCAACTGAATATACTACTGCCATTGATTTGTGGTCTACAGGCTGTGTCATGGCAGAGCTTCTGCTTGGACAGGTTTCATTCATGCATACAATATTTTGCTTTTGTTCAATTTCTTATTCTAATAACATTCATCCATGCAGCCTCTGTTCCCTGGGGAAAGTGGAGTTGATCAGCTGGTCGAGATTATCAAGGTAACATTTTTCTATGATGTCCTAAACTGTTCTCTCCTGTGACCATTGATCTTGACAATAACATGTTTAGTCATAGCACCTTGCAGGTTTTGGGTACTCCAACAAGGGAAGAGATCAAGTGCATGAATCCGAACTACACGGAGTTCAAATTCCCTCAAATTAAGGCTCATCCATGGCACAAGGTATTCTGCCCATCCTTGACAAAACTAATGCAATATCGATGTCCGATTTGGTACATACTTTTGGGACAGGGAGATCTTTTAACGCAAATTACTATGCTGTTAAATTTTGAAATATTTGTTGAAGACAAAAAGGATTAAAAACCAAATGGAAAAGAAATCCAATTTCTGTGTTACCATTTGCGCTTCGACATTCCTATTAGTTGGGTCCTGCGTGTGTGAGCAATGTCCATATTATGTGTGTGTTCAATTGGAAAATTAAACAATACTTTCTCAGTGTTCTTTTTGTAACTCAAAAGTTTTGTTTTTTACCCAGGTTTTCCAAAAAAGGCTTCCACCTGAAGCAGTGGACCTTGTAAGCAGGTTTCTGCAATACTCACCAAATCTTCGGTGCACCGCTGTAAGGCCACATGAGATTTTGGTTGTTATGATGGCCTGAGCAGCCTGATGTGGTATACTGTTAGATTTCTCTCTCATCTAACCTATTTAATTATTCTCCAGATGGAAGCCTGCATGCACCCTTTCTTTGATGAGTTGAGAGATCCAAACACTCGTCTACCTAATGGGCGTCCTCTTCCTCCTCTCTTCAACTTCAGAACACAAGGTATCATAGCTGAATGAAACAGCGATAACAGCATATGAACCTTAGCATTTGCTGATTTGATTCTCATCAACCTAAACATTCCTAAATCTCTCTGCCTCGTCTAACACCTCATGTAGACAGTATTTATGTGAGCTGAGAGAATTATTTCATGAATTATGTTCAAAATGGTACCTAGCATTTAGGTGAACAAACTGAAGCCAATGCTCGATCTTCCACTTCCCGAAATGGCAGAATTGTTCCGTTAATTGTTTGTTCGCCTCAATGTCAAAATGAATCCTGCTGCTTTGAATTTATCCTCAGCTAAACTGATACAACATTTGCAACATTGGCAGAGCTAAATGGCATCCCTCCAGAAGCCATCGAACGTCTGGTTCCCGAGCATGCGAGAAGGCAGAGTTTGTTCATGGCGCTGCGCACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009469