BGIOSGA009474

From RiceWiki
Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009474| Description = No apical meristem proteinPutative uncharacterized| Definition = Oryza sativa Indica Group BGIOSGA009474, complete gen...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009474

Description

No apical meristem proteinPutative uncharacterized

Definition

Oryza sativa Indica Group BGIOSGA009474, complete gene.

LocusTag

OSJNBA0075M12.16

Ensembl Transcript ID

BGIOSGA009474-TA

Ensembl Protein ID

BGIOSGA009474-PA

Length

3199

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39736297..39739495

Sequence Coding Region

39738731..39739495,39736297..39736683

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39736297..39739495 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39736297..39739495 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGACGACGAGATCGCTCTGGAGCCAGGCTACGCCTTCCGCCCTTCCGACGACGGCCTCATCACCCTCTTCCTCCGCCCCAAGATCGCCAAGATCCCCTTCGAGCACCGCCTCATCAACCACGCCGACGTCTACTCCGCCGATCCGGCGGAGCTCGTCGGCGAGCACAGACCGGCGCCGGGAACCCATGGGAGCGGCAGCGTCTGGTACTTCTTCTGCTCCCCGCGCTACACCAGCAAGCGCAAGGCCTCCGGGAGGCGGCAGCGCGCGGTCGGCGGCGAGAGCGTGTGGAAGTCGGAGGGCGGCAAGAAGGCCGTGATCGGCGCCGATGGCCGCCGCGTCGGGTACCTCCAGAAGTTCTCCTATGGCGTCTACGAGTCGTCGTCGTCGTCGGGGTCGGCACGCAGCTTCACGAGGCTTGGGTGGTGCATGACCGAGTACGGCCTCGACGACGACGCCACCGACGGAGCAGACAAGCAGGTGCTCTGCAAGGTCTACCGCTCGCCGCGCGCGGTCTGCGCGGAGGCGCGCACGGCGGCGGCAAAGTGCTCCGGCTCCAAGAGGAAGGCGGACGACGGCGTGGATCACCCGGAGGCGCCGCCGCCCAGCGCGCTGCCGCGGCAAGAGGAGGCCGGGAGCGAGCACGACGAGCAGTCATCGGAGCTCCTGCCGGAGNTTGGACCTGGACGCGCTGCTGTCGGCGCCGATGGACGAGAACCTGGAGAGCACGTTCAGCACGGCCGCCACGGAACAATACATGAGGGCTTTGAGCTTACTTGCGACACCACCAGCAAACCTTTGAAGCTCTTCTTGGGAAACACTATGACTCAGGTGATTAGCCTCTATCCTTCAGGAACTGTCCTTGCCTCTATCATGTACACTATCCCCATGATTCATGGAGTTGACACCTACAACTTGTCATGGGACTCTCCTGGGAGGAATCTCAACGTTGAGACCTACAATTACTTGGCGTTCCTCGGTTGTGGGATCGGGGTTTACCTGTTCCATCCAGATACTGGTAACCTTGTGGGTCATTGCACGATCAAGTGTGCCTCCATGGGGGAAATGCACATGGCAAACCGAAGGAGGGATTTGCAATGGCATGGGTTGCTGCACTGTCACATTCCCGGTGTTATTTCGAGGTTTTAG</cdnaseq>

Protein Sequence

<aaseq>MDDDEIALEPGYAFRPSDDGLITLFLRPKIAKIPFEHRLINHADVYSADPAELVGEHRPAPGTHGSGSVWYFFCSPRYTSKRKASGRRQRAVGGESVWKSEGGKKAVIGADGRRVGYLQKFSYGVYESSSSSGSARSFTRLGWCMTEYGLDDDATDGADKQVLCKVYRSPRAVCAEARTAAAKCSGSKRKADDGVDHPEAPPPSALPRQEEAGSEHDEQSSELLPEXGPGRAAVGADGREPGEHVQHGRHGTIHEGFELTCDTTSKPLKLFLGNTMTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMGEMHMANRRRDLQWHGLLHCHIPGVISRF</aaseq>

Gene Sequence

<dnaseqindica>1..765#2813..3199#ATGGACGACGACGAGATCGCTCTGGAGCCAGGCTACGCCTTCCGCCCTTCCGACGACGGCCTCATCACCCTCTTCCTCCGCCCCAAGATCGCCAAGATCCCCTTCGAGCACCGCCTCATCAACCACGCCGACGTCTACTCCGCCGATCCGGCGGAGCTCGTCGGCGAGCACAGACCGGCGCCGGGAACCCATGGGAGCGGCAGCGTCTGGTACTTCTTCTGCTCCCCGCGCTACACCAGCAAGCGCAAGGCCTCCGGGAGGCGGCAGCGCGCGGTCGGCGGCGAGAGCGTGTGGAAGTCGGAGGGCGGCAAGAAGGCCGTGATCGGCGCCGATGGCCGCCGCGTCGGGTACCTCCAGAAGTTCTCCTATGGCGTCTACGAGTCGTCGTCGTCGTCGGGGTCGGCACGCAGCTTCACGAGGCTTGGGTGGTGCATGACCGAGTACGGCCTCGACGACGACGCCACCGACGGAGCAGACAAGCAGGTGCTCTGCAAGGTCTACCGCTCGCCGCGCGCGGTCTGCGCGGAGGCGCGCACGGCGGCGGCAAAGTGCTCCGGCTCCAAGAGGAAGGCGGACGACGGCGTGGATCACCCGGAGGCGCCGCCGCCCAGCGCGCTGCCGCGGCAAGAGGAGGCCGGGAGCGAGCACGACGAGCAGTCATCGGAGCTCCTGCCGGAGNTTGGACCTGGACGCGCTGCTGTCGGCGCCGATGGACGAGAACCTGGAGAGCACGTTCAGCACGGCCGCCACGGAACAATACATGAGGTATCTGTTGAACGACGAGCCTTTGCCGTGGGCTCCGACGACGGAGCTTGTCGACGGCGGCGGCGGCGGCGGAGACGAGTTCATCCAGACGGCGAACGGACCTTGCATGGATGGCGAGGTCTTCGCGCGCCTGGCTGCCGGAGAAACGCTCGACGACATTCTTGGCTCGACGAGTTCTTGATTGATCTCTATTGTCAGCGGCTGTTCCTCTAGCACTAGTAGTGTAGTTCTTTCGATCGAATCCGATCGAAGTAGGTTTAGTTAGAGAGATTCATGGATTAGGTATTTGTTTGATCCGTGAATAGACACTGAGCTGCATGAAGATATGCATTGCTCGATCGATCGATCTGTAATTTGATGAGAAGAGTTGAATTGATTCTTTCTGTAAAGCGTGATGATGTAGTGCCCTTTTGTGAAGTGAACTAATGAAATTCATCTTCATCAGAGGTTCGGAGTGTTTTTTTTTTCTTTTTGATCGAATTGAAGCAGAGGTTATGCATATGCGTTGCTTGTTTCCTCGATCGATCTGTAATTAATGAAGAGAGTTGAATCGATACTTTTCTGTAAAGTCTGATGTAATTCTCTTTTTTTGCTGCTGTAAGAAATTATAATACGAATGTTTTTCTTCGCTTCAGATGTCCTACATGCTCACATGCATTCACGCTGGCTTTCTCGGTGTTCATCATGATGAGCCCACCTTATATTGGGCCGTGTCGGCCCACCTAGATCCGTATCGGCCCTATTTTCGGTGATCCGGGTTCATGATGGGCCAATTCCGTAACGTGTAGTGGGCTCGTCTCACAGAAAGCCCTGTGACGGTGTGTACCTATCTCGCTCGTCGCCGTCGTTGGGTTCGCGAGACCGCGGCGGCGGCGGGCGGCGAGGGGCCGCCGGCGCCGAGGCATCCGCGACCGCGAGGCGGGGGATGGCGCGCGGCGACGACGGCGAGCGGCTGCCTGTCGCTGTTGGCGTGCTTCCATGGCAGCAGCAGCAGCAACAACAACCTACGGTTTCTGTTTCTCCCCCAAATTCCAAGGCATATCCTCTCCCTGATATTTGAGTTCGCCATCGTAGGAATTTCTTCAGTAGTTCAGTTCCAACCGAAGTGCTTGTCTTTTTTTTTTTAATCTCTAATTGTCTCATGTGCAATTGCATGGAAGAGGAACTAGGGAGAGTCTTGCTATGGAATTGGATGGTATTTTCCAGCGCTCTAGATGGATAGGCAACATGAATTTCCCTAGGATTTGGTTTACTGTGACCTCCGTACGGATATCCTTAAAACCAACTGTCCTTTTAGTTTTAGACCTTTTGTATGCTGATGTAGTGATGTGGTTCCATTGATCAACGCCTTCTTTTGCAAGTTAGTATGTTCATAAATCCACACAGCATGTACACACTAGACAGCTTTGATACTGCATTGACCAGAGTTGGATTTGGTAGTCGTTGTCACAATTGGGCATCAGATTCAAACAGATCTTCTACCTGCTCACACAGAGACTAACTCTTGTCTCATACTACAACAGAAGTCAAACATAACTTTAGTTGTACATGATGATGTGTTTCGTTCTGGTGGACTACAATATGTTCAACCAAAAAGAAAGGAAATTTGTCTCCACCACAAGTCTTACATGTCGTCAAGAGAGTGGCGAAGAGTCTTAAAAGCATCCCAAGATCATCTGCAAATTCCCCCATGGCTAGCCTTGGTTGACCCGGCAAGGTTACAGAAATTGTTTTCTTTTCCTTCTTTTAATGAATGGGAGAACTTCTGCTCTGGTCGATATTGGTTATCCACATTTCCATTCCTCTCAGAGGATGTATACTATATAATATTGGGTACCTTCTTGTTTCCCATCTTATGGGTTCAACAAAAGAAACTATAATATCTAGCATGCAGCTGGTTTTGCTATCGATCATAGCATCCACTGTCATGTTGGTGGCATCTGGAGCACCTCCTCCCACTGCTGCTAGTCTTGCTCCCTGCCCCAAAACATGTGGAGAAGTGAACATCTGGTATCCTTATGGTATCGGGCCTGGTTGCTTTCGGCAGGGCTTTGAGCTTACTTGCGACACCACCAGCAAACCTTTGAAGCTCTTCTTGGGAAACACTATGACTCAGGTGATTAGCCTCTATCCTTCAGGAACTGTCCTTGCCTCTATCATGTACACTATCCCCATGATTCATGGAGTTGACACCTACAACTTGTCATGGGACTCTCCTGGGAGGAATCTCAACGTTGAGACCTACAATTACTTGGCGTTCCTCGGTTGTGGGATCGGGGTTTACCTGTTCCATCCAGATACTGGTAACCTTGTGGGTCATTGCACGATCAAGTGTGCCTCCATGGGGGAAATGCACATGGCAAACCGAAGGAGGGATTTGCAATGGCATGGGTTGCTGCACTGTCACATTCCCGGTGTTATTTCGAGGTTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009474