Os12g0226700

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0226700| Description = Similar to Allyl alcohol dehydrogenase| Version = NM_001072964.1 GI:115487889 GeneID:4351817| Length = 2654 bp| Def...")
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Gene Name

Os12g0226700

Description

Similar to Allyl alcohol dehydrogenase

Version

NM_001072964.1 GI:115487889 GeneID:4351817

Length

2654 bp

Definition

Oryza sativa Japonica Group Os12g0226700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6910328..6912981

Sequence Coding Region

6910356..6910589,6911309..6911486,6911980..6912146,6912258..6912340,6912426..6912804

Expression

GEO Profiles:Os12g0226700

Genome Context

<gbrowseImage1> name=NC_008405:6910328..6912981 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:6910328..6912981 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccacagtaagcaacaagagggtgatcctaaaacgatacgtgactgggcttctctcggaggatgatatggaggtggtgacggtggaggcgccgccgctggatgtgccaacggggtcgaagggggtggtggtgaagaatctgtatgtttcgtgtgacccttacatgcgcaatcggatgacccaccacgagttgcccagctacatcccggattttgtcccaggggaggttttggaaaattttggcgtgatgaaggtgatatcatctgggcacctggatttcaaggcaggtgatcttgtttgggggatgaccggatgggaagaatataccgtgatcaacaatccagaatcgcttttcaagatcaatcaccctgaacttcctctatcctactacactggtattctaggaatgccagggcttaccgcctatgctggattctttgacgtgcccaagccaaagaaaggtgaatatgtctttatctcaggagcatctggtgctgtaggtcaggttgttgggcagcttgctaagatcacaggttgctacgtgatcggcagtgctggttatgacgaaaaggtcaacttattgaagagtaagtttggctttgatgatgctttcaactacaagaaggaacaagatcttgaggcagccctaaggagatattttccagagggtattgatatctactatgagaatgtgggcggcaaaatgctagacgcagtactacctaatatgagtctgggtggtcggattgtggcatgtgggatgatctcgcagtacaacctggagcagcccgagggggtgcgaaacctgtactacatcgttaccaagcgcctgcgcatggagggcttccatgtgtttgactactatgacaggtactaccggttcgaggaggagatggctgggtacctgaaggaagaaaaggtgtcatacgtagaagatgtcgttgaggggctcgacacagcaccggcagcgctcatcaggctcttcactggccgtagcgttggaaaacagctcgtcgccgttgcacgcgagtga</cdnaseq>

Protein Sequence

<aaseq>MAAATVSNKRVILKRYVTGLLSEDDMEVVTVEAPPLDVPTGSKG VVVKNLYVSCDPYMRNRMTHHELPSYIPDFVPGEVLENFGVMKVISSGHLDFKAGDLV WGMTGWEEYTVINNPESLFKINHPELPLSYYTGILGMPGLTAYAGFFDVPKPKKGEYV FISGASGAVGQVVGQLAKITGCYVIGSAGYDEKVNLLKSKFGFDDAFNYKKEQDLEAA LRRYFPEGIDIYYENVGGKMLDAVLPNMSLGGRIVACGMISQYNLEQPEGVRNLYYIV TKRLRMEGFHVFDYYDRYYRFEEEMAGYLKEEKVSYVEDVVEGLDTAPAALIRLFTGR SVGKQLVAVARE</aaseq>

Gene Sequence

<dnaseqindica>29..262#982..1159#1653..1819#1931..2013#2099..2477#aaggaggaggagagcgcggcggcgatcgatggcggcggccacagtaagcaacaagagggtgatcctaaaacgatacgtgactgggcttctctcggaggatgatatggaggtggtgacggtggaggcgccgccgctggatgtgccaacggggtcgaagggggtggtggtgaagaatctgtatgtttcgtgtgacccttacatgcgcaatcggatgacccaccacgagttgcccagctacatcccggattttgtcccaggggaggtagtagctttcaatgtcacagagctccattttttttaattaatagtaatatcatgatcttctcatcataagtttgtatgcttttatctatttattattagttatatcatatcattactactgatggtcacaaattattcctctctgtcttttttttccaaattgcgtattgaaaatttgtccagttccctttcctaattttgtcatgtatagaaggaaaacctagtttgttttttttagttattttcctgtgacataaacctaatgtgtaaagtttcaaccacgcgtgatttgtccatgccatctgaacgttgggagctaacaagctgtgccttttcttttcacataactgacacactcttaatgataatatgaatgagattatttagatataagactgaaaaacatcgcaatgttttcactctgacaaaaccataaatatatactccctccatcccaaaatgtttgacgctgttgacttttttaaaaatgtttgatcgttcgtcttattcaaaaatttaagtaattattaattcttttactataatttatttattgttaaatatacttttatgtatacatatagttttacacatttcacaaaagtttttgaataagacgaacgctcaaacatgtttaaaaaaaattaactgcgtcaaatatttagggaaggagggagtatataattttgttgtcccctgggataagaacactttcaggttttggaaaattttggcgtgatgaaggtgatatcatctgggcacctggatttcaaggcaggtgatcttgtttgggggatgaccggatgggaagaatataccgtgatcaacaatccagaatcgcttttcaagatcaatcaccctgaacttcctctatcctactacactggtattctaggtgaatttctttcactccgtttaaccgcaagaaaattttcaactgcggcgtgcgcctggaaatcgtcctctaatatatttgtttcacatcaaacaaggtgttctattcttgtgttcttcctttctgatcccaaagttagattgatccccttaaccttttatcatacaaaaaagtgttatagactcatattctcttcatttcgtttcaaagtataatgcttcctaggaattcagttttgtactataatataagctttcctacaaggattcaaattccgtttcaaaataaatctaagcaattcaaaatttaaaagttgacaatcgaagtaaccaaaagggaattttttttacttaaccttagtatttactaaataaccaagaaattcttatattttggaatggaggggaagttcacgacattctcattttttaacagctcaaacaactcccaaattgttatcttctctaattgagttaaatctttgataattcaggaatgccagggcttaccgcctatgctggattctttgacgtgcccaagccaaagaaaggtgaatatgtctttatctcaggagcatctggtgctgtaggtcaggttgttgggcagcttgctaagatcacaggttgctacgtgatcggcagtgctggttatgacgaaaaggtttgtgcaatctcatatactttgcattcccaacactaatagaattcaaactcaatgaccttttgagaattccaattagattcgctgaaaatctataaaccacatcactaggtcaacttattgaagagtaagtttggctttgatgatgctttcaactacaagaaggaacaagatcttgaggcagccctaaggaggttcatactcctcacaataatggaataaattccctatgtttcaaatatcccaataactcaatcaagttgatttggttgatttcagatattttccagagggtattgatatctactatgagaatgtgggcggcaaaatgctagacgcagtactacctaatatgagtctgggtggtcggattgtggcatgtgggatgatctcgcagtacaacctggagcagcccgagggggtgcgaaacctgtactacatcgttaccaagcgcctgcgcatggagggcttccatgtgtttgactactatgacaggtactaccggttcgaggaggagatggctgggtacctgaaggaagaaaaggtgtcatacgtagaagatgtcgttgaggggctcgacacagcaccggcagcgctcatcaggctcttcactggccgtagcgttggaaaacagctcgtcgccgttgcacgcgagtgagacaacgctgcttggcatgggagttggcattacgtaatagtactagttcagaattcagaaattgggggctttccagtttggccaatacctagttagtacatctgcttttctcaagtcagacaggagaaaacaatgatattgacgggagtacttccccaaaatgacttttttttattt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0226700, RefSeq:Os12g0226700