BGIOSGA009480

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Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009480| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009480, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009480

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009480, complete gene.

LocusTag

OSJNBA0075M12.3

Ensembl Transcript ID

BGIOSGA009480-TA

Ensembl Protein ID

BGIOSGA009480-PA

Length

4048

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39668004..39672051

Sequence Coding Region

39671725..39672051,39671202..39671323,39669804..39671089,39669471..39669719,39669207..39669373
,39668931..39669010,39668698..39668845,39668324..39668473,39668004..39668240

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39668004..39672051 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39668004..39672051 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGGCGCCATGGACGGCGCTGGCGGAGGAGTGGCGGAGGAAGGGTGCTCCGGGGAGGAGAGGGAGGGAGTCGCCGACGTCGCTGTTGGCGGCGGCGGCGGCGAGGGGGAGCGGGAGGGGAGGACGCTGGTGGTGGGCGTGCGGGCGGACGCCGCGAGCCGGACGCTGCTCACGTGGACGTTCATCAATGTCGCCGCCCCCGGCGACCGCATCGTCGCCGTCCACGTCGTGCTCGCCTCCGCGCCCGTGGCCGCCGCCACCACCGCCGTCGACTTCGACACCATGCTCGCCGTCTACGAGGGCTTCTGCAATCTCAAGCAGATCAATCTAAAGCTCAAGATTTGCAAGGACTCCTCGGTCCGCAAGGCGCTAGTTCGTGAGGCCAACCTGTTTGGGGCATCCAAGGTTATCGTCGGCATCGCCAAGAAGAAGCGCGGGATTTCGTCCCTGCACTCCGTCGCCAAATACTGCTCCAAGAAGCTGCCGGCCAAGTGCGCGGTGCTCGCCGTGGACAGCGGCAAGATCGTGTTCAGGAGAGAATCCAATGTCCACTCAGGCAAGGTCTCCGCGGAGATTCCTGGATGTGGTGATAATGAGTTGTATTGCGAGGTGCCGTTCCTAGCCCGTCAGTGTAAAGAGGAACCTTTACCTTTACATGAACCACCCAGAGATGGTGGTGGTAGTGCGGGCGAGGAAGAAGAAGAGCACGATGTTGGCACAAAGGAGACCGAGCCGGTGAATGCCGTCTCCGGTGAACAGCAGCCTTCCGGTGTGGATCCTGCTGAGTTGTCTCCGGATCAGGTTCAGGGTGATGTTGATCCATCTGACAAGGGTGAAGAGTCGACTGCCGACCAGAAAGATGAGATTTCTGAGCTTCCGGGTGAGGGTGCTAGTGTTTTGTACTGTGTGTTACCAGAGAGGAATGGCCATTCAGCTGCAAGCACGTCCAGTCGGCAATCCAATGATTCGACCGAGCCACCGACTGAAGGGAATGGGGAGCTGTACTGTATTTTGCCCCCAAGAAATGATCATTCAGGCAGGAGTAGCGGTGATTCTAGCCGTTCAACTGCGAGTCGGAAACACGATGATTCTGCCAGTCTGTCTGCTGAAGGAGATGGTGAACTGTACTGCCGATTGCCAAGGACTGGCCATTCAGGTAGAAGTTCTGGGGGATCAAAGCGTTCCTTCGGTGCAAAAGGTTTGATTAGGCGCAGCAGTAGTTTCTCCAGTGATATTCAAAAGGATGTCTCAGTTTGCACGACTACAACTGAACAGACTTCGTCCATGGTATCTACAGAAGCTGAGGATTCACCAAAGAACGCTGCACGTGATGTCGATACACCCTCCAGCTCTCCAATGTCTCTAAGAAGGATGATAGAGGGAAGGCCCGACCGCTGTCGACTTCGAAGGAGGATCTTCAATCATCAAAGAAGCTCATCTTTTGAATGGGCCAAAATTTCCATGGTTCAGTGGGCAATGAGGCTTCCAAGCCGTTATACTTCAGTTGCAGACAACAAATCATTTAAATCAGATGCAAGTCCAAGGTTGAATTGTGATTCCGAATGTGAATCCACTTCAGCTGTTGACACAGAATCTATGTTTTCGTTCTCTTTATATGATATATCATGGCCTCCAAATGAAGTGGAATCGCTTCAAGAGAAGTACTCTTCAACGTGTAGGCTGTTTACCTATGAAGAGCTGAAACTTGCTACGTCAAACTTCTCACCAGATATGTTAATTGGAAAGGGAGGAACAAGCCAAGTTTTCAAGGCACAACTATTTGATGGCACATTATCAGCTGTAAAGATTCTGAAACCTTCAGTTGATGCAATACAAGAGTTTGTTACAGAGGTGGAGATTGCAACCAGCTTGCAACATGACAATATTGTTTCACTAAGAGGATTCAGTTCTGATAACTACAGTCTTGTGTTGGTATATGATTACATGCTCCAGGGAAGCTTAGACAAAGCACTTCATGGCAAGCATGACAGCAAGGATAGCCTTAGCTGGGAGAAGAGAAACAAAATAGCAATTGGCATAGCAATGGCACTTGAATATCTACATCATGGAAGTGTCACCCAATCTGTGATTCATGGAGATGTTAAGTCTTCGAATATCCTCCTCTCAGAGGATTTTCAGGCACAGCTTTGTGATTTTGGGTTGGCAAAGCAAGTCTCAGCTTCAACCCCCCACCTAACATGTACTGACATCACGGGAACGTTTGGATACTTGGCTCCCGAGTATTTTTCGCACGGGAAGGTCAATGAGAAGATTGATGTCTATGCATTTGGAGTTGTAATTCTGGAGATTATTTCAGGAAGAAGACCTATTAGAACAGGATGTTCAAAGGGTCAGGAAAGCCTAGTTGGATGGGCAAAGCCATTACTATCAAGTGGGGAAATTAAACAATTGGTTGATCCATTCTTGGGAAATGATTATGACTGTGATGAAATGGAGAGGATGACTCTCGCAGCTTCGCTGTGCACAAGGACATCTTCTCATTCCCGACCCGAAATGTCACAGATGTTGAAACTGCTTGAAGGAGACGACGAGACGATCCACTGGGCAAGAACCCAGGTCACCGCGAGCTTCGACGGATCGGACGAGGAGGCTGTGGCGGCTCCTGACTCAAACATGCAGTCACACCTGAACCTCGCGTTGCTGGGCGTGGAGGATGACACCCTCTCTCACTGCAGCACTGAACAGACCATGGACACTTCAGCTGACGGGTACTGGAGCCGGTCATCGAGCTTCGACTAA</cdnaseq>

Protein Sequence

<aaseq>MEEGAMDGAGGGVAEEGCSGEEREGVADVAVGGGGGEGEREGRTLVVGVRADAASRTLLTWTFINVAAPGDRIVAVHVVLASAPVAAATTAVDFDTMLAVYEGFCNLKQINLKLKICKDSSVRKALVREANLFGASKVIVGIAKKKRGISSLHSVAKYCSKKLPAKCAVLAVDSGKIVFRRESNVHSGKVSAEIPGCGDNELYCEVPFLARQCKEEPLPLHEPPRDGGGSAGEEEEEHDVGTKETEPVNAVSGEQQPSGVDPAELSPDQVQGDVDPSDKGEESTADQKDEISELPGEGASVLYCVLPERNGHSAASTSSRQSNDSTEPPTEGNGELYCILPPRNDHSGRSSGDSSRSTASRKHDDSASLSAEGDGELYCRLPRTGHSGRSSGGSKRSFGAKGLIRRSSSFSSDIQKDVSVCTTTTEQTSSMVSTEAEDSPKNAARDVDTPSSSPMSLRRMIEGRPDRCRLRRRIFNHQRSSSFEWAKISMVQWAMRLPSRYTSVADNKSFKSDASPRLNCDSECESTSAVDTESMFSFSLYDISWPPNEVESLQEKYSSTCRLFTYEELKLATSNFSPDMLIGKGGTSQVFKAQLFDGTLSAVKILKPSVDAIQEFVTEVEIATSLQHDNIVSLRGFSSDNYSLVLVYDYMLQGSLDKALHGKHDSKDSLSWEKRNKIAIGIAMALEYLHHGSVTQSVIHGDVKSSNILLSEDFQAQLCDFGLAKQVSASTPHLTCTDITGTFGYLAPEYFSHGKVNEKIDVYAFGVVILEIISGRRPIRTGCSKGQESLVGWAKPLLSSGEIKQLVDPFLGNDYDCDEMERMTLAASLCTRTSSHSRPEMSQMLKLLEGDDETIHWARTQVTASFDGSDEEAVAAPDSNMQSHLNLALLGVEDDTLSHCSTEQTMDTSADGYWSRSSSFD</aaseq>

Gene Sequence

<dnaseqindica>1..327#729..850#963..2248#2333..2581#2679..2845#3042..3121#3207..3354#3579..3728#3812..4048#ATGGAGGAGGGCGCCATGGACGGCGCTGGCGGAGGAGTGGCGGAGGAAGGGTGCTCCGGGGAGGAGAGGGAGGGAGTCGCCGACGTCGCTGTTGGCGGCGGCGGCGGCGAGGGGGAGCGGGAGGGGAGGACGCTGGTGGTGGGCGTGCGGGCGGACGCCGCGAGCCGGACGCTGCTCACGTGGACGTTCATCAATGTCGCCGCCCCCGGCGACCGCATCGTCGCCGTCCACGTCGTGCTCGCCTCCGCGCCCGTGGCCGCCGCCACCACCGCCGTCGACTTCGACACCATGCTCGCCGTCTACGAGGGCTTCTGCAATCTCAAGCAGGTCTAGCTCCCTCTCCCCTCCCTTCTCTCGCCCTCGACTTGCCAGTTTGCTCGCCACTTTCTACCAACCATGTCCATCCTTCTCTTCTGCTTCATCTTTTTTCTTCTCAATTGTTTGGTTGATTTCAATCTCTCCTTTATTTTTGGCTGTTTTTGAAGGATTAGATTTTTAGCCCATATCCTTACAATTTTTCACCCATCCTGCATAAATTATCCCAGTTGCAACAAATATTCAGAGAGTGGTTTCCGCTAACTTTTGCAGTAATGCGATTTTTTTACCTTTATTTATGGCTTTCCTTCTGCAATTCACATACTTCCCGCTCGTTCCCCTCTGCAAATCGCAGTATTTTCGCAGTAATTGACTGCTTCAGCAAGCTAACTTTGGGGTCTTGTGTTGTGCAGATCAATCTAAAGCTCAAGATTTGCAAGGACTCCTCGGTCCGCAAGGCGCTAGTTCGTGAGGCCAACCTGTTTGGGGCATCCAAGGTTATCGTCGGCATCGCCAAGAAGAAGCGCGGGATTTCGTAAGTGACATTCGATCCGCATCCGCTATCAAATCTCATCAACTTTTATTTTTCACCCAATGATGATATGATTGATGGCCAACTTTCGTTTTTTTTGGGGGGGATTCGTCAGGTCCCTGCACTCCGTCGCCAAATACTGCTCCAAGAAGCTGCCGGCCAAGTGCGCGGTGCTCGCCGTGGACAGCGGCAAGATCGTGTTCAGGAGAGAATCCAATGTCCACTCAGGCAAGGTCTCCGCGGAGATTCCTGGATGTGGTGATAATGAGTTGTATTGCGAGGTGCCGTTCCTAGCCCGTCAGTGTAAAGAGGAACCTTTACCTTTACATGAACCACCCAGAGATGGTGGTGGTAGTGCGGGCGAGGAAGAAGAAGAGCACGATGTTGGCACAAAGGAGACCGAGCCGGTGAATGCCGTCTCCGGTGAACAGCAGCCTTCCGGTGTGGATCCTGCTGAGTTGTCTCCGGATCAGGTTCAGGGTGATGTTGATCCATCTGACAAGGGTGAAGAGTCGACTGCCGACCAGAAAGATGAGATTTCTGAGCTTCCGGGTGAGGGTGCTAGTGTTTTGTACTGTGTGTTACCAGAGAGGAATGGCCATTCAGCTGCAAGCACGTCCAGTCGGCAATCCAATGATTCGACCGAGCCACCGACTGAAGGGAATGGGGAGCTGTACTGTATTTTGCCCCCAAGAAATGATCATTCAGGCAGGAGTAGCGGTGATTCTAGCCGTTCAACTGCGAGTCGGAAACACGATGATTCTGCCAGTCTGTCTGCTGAAGGAGATGGTGAACTGTACTGCCGATTGCCAAGGACTGGCCATTCAGGTAGAAGTTCTGGGGGATCAAAGCGTTCCTTCGGTGCAAAAGGTTTGATTAGGCGCAGCAGTAGTTTCTCCAGTGATATTCAAAAGGATGTCTCAGTTTGCACGACTACAACTGAACAGACTTCGTCCATGGTATCTACAGAAGCTGAGGATTCACCAAAGAACGCTGCACGTGATGTCGATACACCCTCCAGCTCTCCAATGTCTCTAAGAAGGATGATAGAGGGAAGGCCCGACCGCTGTCGACTTCGAAGGAGGATCTTCAATCATCAAAGAAGCTCATCTTTTGAATGGGCCAAAATTTCCATGGTTCAGTGGGCAATGAGGCTTCCAAGCCGTTATACTTCAGTTGCAGACAACAAATCATTTAAATCAGATGCAAGTCCAAGGTTGAATTGTGATTCCGAATGTGAATCCACTTCAGCTGTTGACACAGAATCTATGTTTTCGTTCTCTTTATATGATATATCATGGCCTCCAAATGAAGTGGAATCGCTTCAAGAGAAGTACTCTTCAACGTGTAGGCTGTTTACCTATGAAGAGCTGAAACTTGCTACGTCAAACTTCTCACCAGGTAATGTCATTTGGGATGTGCATTACTTTGATTCACAGGCTTTTTGGCAAAGTTGTCTGCTGATTTTCTTTTACACCAATGCAGATATGTTAATTGGAAAGGGAGGAACAAGCCAAGTTTTCAAGGCACAACTATTTGATGGCACATTATCAGCTGTAAAGATTCTGAAACCTTCAGTTGATGCAATACAAGAGTTTGTTACAGAGGTGGAGATTGCAACCAGCTTGCAACATGACAATATTGTTTCACTAAGAGGATTCAGTTCTGATAACTACAGTCTTGTGTTGGTATATGATTACATGCTCCAGGGAAGCTTAGACAAAGCACTTCATGGTAATCCTTAAAATGAAATACTTTGCATATTTATTCCCTGACCTTATTGATAGCTCATCTCTTACTTTGTGATTGACTGGTTGTAACTGCTCTTCAGGCAAGCATGACAGCAAGGATAGCCTTAGCTGGGAGAAGAGAAACAAAATAGCAATTGGCATAGCAATGGCACTTGAATATCTACATCATGGAAGTGTCACCCAATCTGTGATTCATGGAGATGTTAAGTCTTCGAATATCCTCCTCTCAGAGGATTTTCAGGCACAGGTAAATAACCATAAGAGATTTGCAAATACTGAAATACCTGAAGCAATTATAGTTTTTTCTTCATACAGTAAATATTTTTTTCAGATCAAAGCAAGTGCTTTAATGCGTTAGCAGTGACGAATTACATTGAGTATTTGGTAGCCTTACTAGTTAATTTTGATTCTGCTTATGACATCATCTCTTTTGAAATTTCCAGCTTTGTGATTTTGGGTTGGCAAAGCAAGTCTCAGCTTCAACCCCCCACCTAACATGTACTGACATCACGGGAACGTTTGGGTAAGTACCATCTCTATGCTATTTTTACCAGCTATTGCTACTTTTATCAAGTGTGAAATGCCTAAGCAAACTACTCCTGTGACAGATACTTGGCTCCCGAGTATTTTTCGCACGGGAAGGTCAATGAGAAGATTGATGTCTATGCATTTGGAGTTGTAATTCTGGAGATTATTTCAGGAAGAAGACCTATTAGAACAGGATGTTCAAAGGGTCAGGAAAGCCTAGTTGGATGGGTGAGTGATCCTTAACCCCCTATATGCCTGGCTGGCTTGCTCTGAGCAGTAACATGCCCTGAGCCAAGAACAAAATGGTAGTTGCACGTTCAGTCACTGTTGGAATTAAAGCTGTCTAGGACCATTGCTGCATTTTTTTTGCTCTGTTGACCACACAATCACTCTTGCACGAGCGAGTTATTAATTATTTTTTCTTTTTGCTAATTCTTTGTTGACGGATTCAGGCAAAGCCATTACTATCAAGTGGGGAAATTAAACAATTGGTTGATCCATTCTTGGGAAATGATTATGACTGTGATGAAATGGAGAGGATGACTCTCGCAGCTTCGCTGTGCACAAGGACATCTTCTCATTCCCGACCCGAAATGTCACAGGTAAGAACCTGAACAAATTACATGTACAAATACTTAAAAAGTCTTGATGATTGACCTCAACTTGCTATGTTCTGGCAACACAGATGTTGAAACTGCTTGAAGGAGACGACGAGACGATCCACTGGGCAAGAACCCAGGTCACCGCGAGCTTCGACGGATCGGACGAGGAGGCTGTGGCGGCTCCTGACTCAAACATGCAGTCACACCTGAACCTCGCGTTGCTGGGCGTGGAGGATGACACCCTCTCTCACTGCAGCACTGAACAGACCATGGACACTTCAGCTGACGGGTACTGGAGCCGGTCATCGAGCTTCGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009480