BGIOSGA009510

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Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009510| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009510, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009510

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009510, complete gene.

LocusTag

OSJNBB0027B08.11

Ensembl Transcript ID

BGIOSGA009510-TA

Ensembl Protein ID

BGIOSGA009510-PA

Length

5081

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39274131..39279211

Sequence Coding Region

39279008..39279211,39278851..39278904,39278302..39278363,39278128..39278209,39277905..39278028
,39277729..39277812,39277440..39277554,39277128..39277278,39276800..39277012
,39276526..39276597,39276314..39276364,39276165..39276215,39275974..39276081
,39275731..39275895,39275121..39275195,39274514..39274752,39274131..39274260

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39274131..39279211 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39274131..39279211 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGGCGGCGACCTCCAGAGCCCGAAGAAGCGGAAGCGTGATGCGGCGGGGAAGCCCAAGACGCTGGCGAAGGGGGGAGACGACGGGAAGAAGCGGAAGAGGCCCTCAGATGCCAACATGGCGCAAGGCGGCGGCGGCGGCGAGGTCAAGGTGAAGAAGGAGCCGGTTACTGCCAAGGAGAAGCGCCTGGCTGCTAAGGAAATGGCAGAGTCAAGGAAGAAGAAGAGGAAACGGAATTACAGCCTCGAGAAGGAGCTTACTGTACTATGGGAAAAGATGCGATGCCACAATGTGAGCAGCACGGAGAGATCTAAGCTGGTAAGTGAGGCTCTCCGTAAAATGGATGGGAAATATTCAGAAATTGCTGGTTCCCACGTAACTGCACGTGTTTTACAAACATGCGTGAAGTTGTGCTCACAATCAGAAAGGGATGCGATTTTTGAAGCCCTACAGCCAGATTTGCTAACTCTCTCTCTCAAGAAATATGCTGTTTTCCTTGTAAAGAAGCTCATTAAGCGAGCCACTAAAAAGCAGTTTGAATGGTTCATCTCTTCTCTTCACGGTCGTGTTGCTAAACTTCTTCGTCATACTATAGGAGCTTCAGTCGTTGACTTTGCATATCAACTGGCAACACCGCCTCAGAAAAGAAGGTTGCTATTGGAATTGTATTCTACTGAGCTCCAGCTGTTCACTGACCTGACTGGACAGAAAACCCACAGTTTGTTAGAGACAATTTCCAACCTTGGATTACAAAAATCATCTGTACTGCAGCATATGACTACCGTGATTTATCCGATCTTGGAGAAAGGTATCGTTGAATATCCTATAGTGCACACGGCTGTATTGGAGTATTTTACAATCGCTGACAAGACCTCGGCCACTGATGTGATTCGACAATTTATCCCCCTTCTTACACAAGGATCATCTGCCATTGATGGAGATGAGCCATCGGTTGCCCCTGAATTACAAAAGAAACTGAAAGCTAAGAAAAAAAGGTTGACAGAGCCACTTCTTGTTCGGATTATGAACACCAGAGAAGGATTAAAAATAGGAGTTAGTTGCCTCAAGCATGGAAGTGCAAAGGATAGGAAGAAGATCATTAAAAGTTTGAAGGGGCACATTATGAAGCTTGCTCTTAGTGATTATGGATGCATTTTACTTGTTGCCATTCTTTCCGTTGTTGATGACACAAAGCTTGTTACCAAGATCGTAATTCAAGAGCTCGCCAAACATTTGAAGCAACTTATTTTTGACAAGAATGGAAGACGTCCATTGCTGCAACTACTTCACCCTAATTGTTCACGCTATCTGCCTCCAGCTGATCTGGCTTGTCTGAACTATCGTGTGCCTTCTCTTATTTCAAAGGATGAAGCTTCCGAGAGTGCTGCAGAAGATATCCCAGAGAATAAGGTGGATGTTGCAACTAATAAGGAGCAAGATGGTTCAGAAAGCATGCAGAGTGCGTCTGACAGCAAAAAGGACCCATTTCAACGGCGACATGAATTGTTGATCAAAAGTGAACTTGCCGAGGTGCTCATCCAGACTCTCATTGAGAATGTCGGGGAGTTACTTCGAACAAATTTTGGCAAAGATGTATTGCATGAGGTTGCGGTTGGTGGAGAAGATAATATTCTGGAGGGCATCACTGACAGGATCCACAGCTTGCACAATGCAATAGCTTCTGATGCAGCACGTCCAAAGGCAGAAGATACTGAACATGCCTTTGATAACTATCATTCCAGCCGTCTAATCAGAAGACTTATACTTGAATCTCCAGCATTTGCTGCCATCCTATGGAAAAAAGCTCTTGAAGGCAAATGCAAGACATGGGCTGATGGGCACAGTTCCAAGGTGGTCGCAGCATTCCTTGAATCGCCCGATTCCAAGGTAAGGGATCTTGCAAAAGCTGAGCTGCAGCCGCTGGTTGATCGTGGCATTCTGAAAATCTCAGACCATAAAGCAGTCGAAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAGGGDLQSPKKRKRDAAGKPKTLAKGGDDGKKRKRPSDANMAQGGGGGEVKVKKEPVTAKEKRLAAKEMAESRKKKRKRNYSLEKELTVLWEKMRCHNVSSTERSKLVSEALRKMDGKYSEIAGSHVTARVLQTCVKLCSQSERDAIFEALQPDLLTLSLKKYAVFLVKKLIKRATKKQFEWFISSLHGRVAKLLRHTIGASVVDFAYQLATPPQKRRLLLELYSTELQLFTDLTGQKTHSLLETISNLGLQKSSVLQHMTTVIYPILEKGIVEYPIVHTAVLEYFTIADKTSATDVIRQFIPLLTQGSSAIDGDEPSVAPELQKKLKAKKKRLTEPLLVRIMNTREGLKIGVSCLKHGSAKDRKKIIKSLKGHIMKLALSDYGCILLVAILSVVDDTKLVTKIVIQELAKHLKQLIFDKNGRRPLLQLLHPNCSRYLPPADLACLNYRVPSLISKDEASESAAEDIPENKVDVATNKEQDGSESMQSASDSKKDPFQRRHELLIKSELAEVLIQTLIENVGELLRTNFGKDVLHEVAVGGEDNILEGITDRIHSLHNAIASDAARPKAEDTEHAFDNYHSSRLIRRLILESPAFAAILWKKALEGKCKTWADGHSSKVVAAFLESPDSKVRDLAKAELQPLVDRGILKISDHKAVEK</aaseq>

Gene Sequence

<dnaseqindica>1..204#308..361#849..910#1003..1084#1184..1307#1400..1483#1658..1772#1934..2084#2200..2412#2615..2686#2848..2898#2997..3047#3131..3238#3317..3481#4017..4091#4460..4698#4952..5081#ATGGCCGGCGGCGGCGACCTCCAGAGCCCGAAGAAGCGGAAGCGTGATGCGGCGGGGAAGCCCAAGACGCTGGCGAAGGGGGGAGACGACGGGAAGAAGCGGAAGAGGCCCTCAGATGCCAACATGGCGCAAGGCGGCGGCGGCGGCGAGGTCAAGGTGAAGAAGGAGCCGGTTACTGCCAAGGAGAAGCGCCTGGCTGCTAAGGTATCGTTGTTGCTCGTCCGCTCGGTAAATTTTAATCATCTCTGGAGCTGGAGCATGGGTTCGAGGCATTAGCGCTGAACTTGGTGTGGTGTGGATTGGTCAGGAAATGGCAGAGTCAAGGAAGAAGAAGAGGAAACGGAATTACAGCCTCGAGAAGGTAAATTTGGTCCCTGTACGATCTATTTCAACATGCCGGGAAATTCATGCCTATTGACTTATGAGCCAGAGTATGATTCCAGGACCAACTCTCATAATGCTAGGCAATTGGAACAATGGTGTGTTCAGGGTTTTATTTTTTTTAAGATATATTCTCACCAATATATTCTCACATATAGAGCTTATATGTTCACGAATTTCATTAGAAGAGTTTAATTTTCGCTGCATTAGTTGAACATTGAATAAGGGGAACCTACTATTTTCATGGTCATGTGTTATATCCAATCTTGATCTTCACTCTTGGAACTATATGACATGAATGCAAAACTGTAATTTGATTCTGGTACCCTTGTCACTGGTGGGGATACTTAGCTTCACGAGAATAGCTACATTGTCATATTTCTCTCTACTAACAGTAAGCATTGGGTGTCAAATTTATGTTGGTTTCATTCGAATCTAGTTTACTGATTGCATTTAAATATTGTCAGGAGCTTACTGTACTATGGGAAAAGATGCGATGCCACAATGTGAGCAGCACGGAGAGATCTAAGTATGCATTACATCATTGTCATGACTCGTATCTTTGAGATCTTACAGTGACAAATCAATTTATTATATTGATTTTTTTCTCAAAATATCCAGGCTGGTAAGTGAGGCTCTCCGTAAAATGGATGGGAAATATTCAGAAATTGCTGGTTCCCACGTAACTGCACGTGTTTTACAAGTAAGATGATCAATCGATCATATTCATTTGTATATCAACATGTTACATGGTTTTGATGTTCTTTTTCCTGGTGTTGATGAGCATTGTTTCTTTTGGCAGACATGCGTGAAGTTGTGCTCACAATCAGAAAGGGATGCGATTTTTGAAGCCCTACAGCCAGATTTGCTAACTCTCTCTCTCAAGAAATATGCTGTTTTCCTTGTAAAGAAGCTCATTAAGCGAGGTAAAAGCTCTGTTGGGTTCATACATGATAATATTTCTTTATGGTTGGATATGCCATTGGCTCCATTAACATGCCTGTATTTGTGATTGCAGCCACTAAAAAGCAGTTTGAATGGTTCATCTCTTCTCTTCACGGTCGTGTTGCTAAACTTCTTCGTCATACTATAGGAGCTTCAGGTATATATTACTTGTTATTGTAAGAGATGGCATAAAACTTGCTATTTTATTATCATTTGTTAGGAACCTTAAGAGTTGATAGTTGTGTGCAATTCATGTGAATTTGTTTGTATTTTATCTGTACATGATAAAGTAAATGATAATTTAATGTTATGCCAATTCTTTTTCTTTCAGTCGTTGACTTTGCATATCAACTGGCAACACCGCCTCAGAAAAGAAGGTTGCTATTGGAATTGTATTCTACTGAGCTCCAGCTGTTCACTGACCTGACTGGACAGAAAACCCACAGGTCATTGCACTAAACTAACTCATGTTTCTGTTTTCAAATTTCCTTGCTCTTTTGATTGTTCTATATGCTTTCTGAAAAAAAGATTCGTTTTCACTATAGATCAAACAACTGTCTGCGGTAACAGGCTACTGCAATTTGCTAACTTAAACTCCCTTTTTCAGTTTGTTAGAGACAATTTCCAACCTTGGATTACAAAAATCATCTGTACTGCAGCATATGACTACCGTGATTTATCCGATCTTGGAGAAAGGTATCGTTGAATATCCTATAGTGCACACGGCTGTATTGGAGTATTTTACAATCGCTGACAAGGTAATGCTATCCATTTATTGTGTAGCCTATCTACAGTCTAAACATGCCTTTGTTGGCATATCCTTTCCTTTTGGTTTGTCTTTATCACACTGTCCTATAATGCTTGATTTTGCAGACCTCGGCCACTGATGTGATTCGACAATTTATCCCCCTTCTTACACAAGGATCATCTGCCATTGATGGAGATGAGCCATCGGTTGCCCCTGAATTACAAAAGAAACTGAAAGCTAAGAAAAAAAGGTTGACAGAGCCACTTCTTGTTCGGATTATGAACACCAGAGAAGGATTAAAAATAGGAGTTAGTTGCCTCAAGCATGGAAGTGCAAAGGTAGGTTATATTTTTTTTTCTCTGAGACTATTATTTTATGTTGACTCCATACCTTTTCTTATGGGACACTGAAGTAGCATGCCAAATGACTACCCATTACATAGTCCTTCCTCTGTTTTTTTCTTAGTGTGGAGATTATCCTCATAATTAAAATGTATTCGGCTTCCATGTAAGATTCCGTTAACTTTGTGTTGAACTTCAGGATAGGAAGAAGATCATTAAAAGTTTGAAGGGGCACATTATGAAGCTTGCTCTTAGTGATTATGGATGCATTGTAAGTATGCCAGTGTTTACATTTGCAGTTACCGCTTGGTGAAAACAACATTATGAATAAAATTGTTATATGTGAAAGAACTTTTTTGCTACCGAAGATTTCAGTTTATTTTGTGCTCAAATGATTTATACTCTACTGATATGTCATCTTTTCCCTTTCAGTTACTTGTTGCCATTCTTTCCGTTGTTGATGACACAAAGCTTGTTACCAAGGTTAGCTAGCTCCAGTCTTCTATGCACCTGTTCTGAGTATTGTGCTGTGATAAATATCGTATGGAGCATTTATATAACACTTTTGTTTGATTTGATAGATCGTAATTCAAGAGCTCGCCAAACATTTGAAGCAACTTATTTTTGACAAGGTGAAAAGGAAAACTGAGCTTCTGATATTTTTCAAAATAAATCCACAATGCACTAATAGTAATGAAGCTTCTTGTTGGTACAGAATGGAAGACGTCCATTGCTGCAACTACTTCACCCTAATTGTTCACGCTATCTGCCTCCAGCTGATCTGGCTTGTCTGAACTATCGTGTGCCTTCTCTTATTTCAAAGGCAAGCTAGCTATTCTGTTTAGTATTTTAAGGAGAACATAGTGAAGTGCTGTGTTATAAATATTCCACTTTTGGTTAGGATGAAGCTTCCGAGAGTGCTGCAGAAGATATCCCAGAGAATAAGGTGGATGTTGCAACTAATAAGGAGCAAGATGGTTCAGAAAGCATGCAGAGTGCGTCTGACAGCAAAAAGGACCCATTTCAACGGCGACATGAATTGTTGATCAAAAGTGAACTTGCCGAGGTGACATTTATTCAGTGCTATGTTTATTCAAATACAGTGTTAAAAGGATGCACCTTTTCACATTGATTACTGCAGTAGGGTACAATATGATTTCTTTGGTGCTCGTTTAGTCGCATAGCAGTAGCCAGTCACAGTATGTATAGCTACATGCCCACCATGTCCTAAACCCCATAATACCAACATGCACAGCATTTTGTGTGCTCACGAATATTATTATATAAATGATGGCAAAATGGTCCATTAGGGATTTTCCTATGCAAGGTTTCAAGTATGTAACTGGAAAACAACACTTACAATAAGGGTCTACTGTATTTTCTTGTGTGCCCACTATTTTGCCCAATTAGTGCTGACGTGACAACTAACATAAGTTAATCGTGATGAATTTACTAGCCTTGCTCATAGGCCTTTCTTTTTGTGATTATTAGATATAATATCTAGATGCCATCGTGGCAGCATAGAGTTACTTGTGACTCAAAGTATTGAATATGCTTTATGTGGATTTAATATAATGCAGACCTTCCTGATCTTTTCTCAGGTGCTCATCCAGACTCTCATTGAGAATGTCGGGGAGTTACTTCGAACAAATTTTGGCAAAGATGTATTGCATGAGGTGAACTACTTTTGTCCTTGCAGATGGTGAAACCTGCTTTTTATTATATGCTAACAATTTTTCATGTCATAACCTCATTGGCATGGCATGATCTTTGGCTGGTACTCTTCTTTCCGTGAATATCGGTCACTTGTTTACTGAATCATGTATCAGGGAAATCATGATTTGAATAAGTTGCACCAAGAATACCCTTTCGTAGTATATCAGGCACAAACGAGTTAGTGAAATACGATACACAGTCATAATCTGGAATATTGAAGCAACGTGTCTTTGCCAATCTGCGGTGCTTGATTGTTGTCATTGTATAAATAATGTTTCATAAGTGCCACTGGTGTCACTCTGATATGTTGACATTTGCAAATCTGAAGGTTGCGGTTGGTGGAGAAGATAATATTCTGGAGGGCATCACTGACAGGATCCACAGCTTGCACAATGCAATAGCTTCTGATGCAGCACGTCCAAAGGCAGAAGATACTGAACATGCCTTTGATAACTATCATTCCAGCCGTCTAATCAGAAGACTTATACTTGAATCTCCAGCATTTGCTGCCATCCTATGGAAAAAAGCTCTTGAAGGCAAATGCAAGACATGGGCTGATGGGCACAGGTACCTCGATTTTTATTGATATGACCCTCTCGCCTCTTCTCATGTTTTCCAGGAGTCACATATAGATATGTTCTATTCATCGGATATTTATAAAATTCAATCGTTGATTGGAATTTGACACCAGTCCCTTTAGGTCATATTCCGGTGGCATTGTCTAATTTATCATGCATACTGTAAATTTCTGATATTCTCTCAGCTTGCTTGTTCTGCCTGATGAACATTTTGGTTTTGATTTCTTGATATTTTTATTCAGTTCCAAGGTGGTCGCAGCATTCCTTGAATCGCCCGATTCCAAGGTAAGGGATCTTGCAAAAGCTGAGCTGCAGCCGCTGGTTGATCGTGGCATTCTGAAAATCTCAGACCATAAAGCAGTCGAAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009510