BGIOSGA009522

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Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009522| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009522, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009522

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009522, complete gene.

LocusTag

OSJNBA0010E04.5

Ensembl Transcript ID

BGIOSGA009522-TA

Ensembl Protein ID

BGIOSGA009522-PA

Length

3308

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39173370..39176677

Sequence Coding Region

39176525..39176677,39175897..39175970,39174600..39174749,39174181..39174466,39173792..39174025
,39173370..39173684

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39173370..39176677 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39173370..39176677 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATATGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCAGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGCGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACAGTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACAATGAGCACCCCAATCAAGGACAGAGTTGATAATGTAGGGCTTTACGACCTGACAGACTTGCTTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGA</cdnaseq>

Protein Sequence

<aaseq>MDWAAAGYTAAALVCAAAATVIALVHIYRHLLHYAEPIYQRFIVRLIFMVPVYAVMSFLSLILPDNSIYFNSIREIYDAWVIYNFFSLCLAWVGGPGAVVVSLNGRTLKPSWFLMTCCFPAIPLDGRFIRRCKQGCLQFVILKPILVVITFILYAKGKYADGNFSVKQSYLYITIIYTVSYSMALYALAVFYAACRDLLRPYNPVPKFIMIKSVVFLTYWQGVLVFLAAKSRFIKNAEKAADLQNFVLCVEMLIAAIGHLFAFPYNEYAGPNGRPSGDFKGSLLHALKFNDFYHDTVHQFAPTYNEYVLYNHNEGDSTQRKYPSASTVPSGRDVELSGISVMPANSAVTSSVSSNQADQEETMSTPIKDRVDNVGLYDLTDLLDVDLSNYPAKVPAISDVRKQ</aaseq>

Gene Sequence

<dnaseqindica>1..153#708..781#1929..2078#2212..2497#2653..2886#2994..3308#ATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTAATGCAACGCAGCTCGTCCCCGTAGCTCCCCCCCTCGCGCCAGATCTGTCGATGCCTTCGCGGTTTTTAGCATTTTTTTTGTGGGGGGGTGAATTCGTGGGGGGGGGGGGGGGGTGTGGTTTCGCGGTCGCGAGCTGGCCTGGAATGCGAGCCCGTTTGGATGGCTTCGATTACGCGTCGTTCCGAGTTCCCGCCTCTGATTCATGGAGCCTAAGCACCTGCAGGAGGCTGCAATTAACTTGCACATGATTTTTTTTCTTTTTCTTTTTGTGTGCGTGGATCTACGAGTCGATTTGTTGGTCCTGTTAGGTTTGATCGGTGTCCAGATGTTGTGTTGAAGAAAATTTGATAGCGCGGCAACTCCGTGGCTGCAATCGCTGTGCTGATTGATGAATTTGCTCGAGCTAGCTGATCCTGATGATCTTTTAATGGTTGCAATCATTTGTATTATCATGTTTCATCTGGTGTACATTTACATTTAGCCCTTATATTGAATTGATTTTGTTTGCAGCACTTCAGCATATTAACTCTGATGATGTTTATTTGTTGCAGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATGTAAGTCAATCTTATAATCTTGCCCCTTAATGTGAACTAACTGTTCTTTTGGATTGTGGTTCCTGTTTTCTGCTCACTTGTTGGGAGCTGAACATGTAATCTTGTATCTCCAATGATCTTAAAGTTATGTTGTAGACACTAGACAAGCAGCAAATATAAGAACTGCCATAAAAACTTTCTTTTGGCATTCTCTAATTGCCAATGGGCACAACTTTTCTTTTGTTGCCACACGTTAGTATGATTTGACATCTGTGCCAGCATTGTTGATATTGCTGGTGCACCATGTCACATTCTAGCTCTGATGCACTTCTTTTGCTATCACCTGATTTATACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCATATTCATATTGATGTTAATGAGACATATATATCTATCTAGATTCATTAACATCAATATGAATGTGGAAAATGTTAGAATGACTTACATTGCGAAACGGAGGAAGTATATACTAGCAATATCATCATGACAACATTGGTACACTGCCCATGTCTTCATATGTGTTGTGTTTACGTTTAGCTACTGTGTTGATAAGCCTCAGCAATCACTAGTGTAGAGAAGATCTATTATGCCATTTGCGCCACATCACATGCATTCATATTTCTAGATGTCGTTTTAATCCATCAGCCCATGAACCATGATTTGAGATGTTAAATACACTTGATATATGAAGACTATTATCACTGTTAATCTTGAGTGTCTTACTAAGACCAACAACACACATGAAGAAAACAGGGGGAGAAAGCGCATTGAATGATCACCACTTCTATATAACTACAAAATCATCATAATCTGACACAGTATGCTAATAAGTTATTGTAATGGAAATGCTAATAAGTTATTGTAATGGACATGGCCTTCATTCTTACAGAACTGCTGGTTTATAAATTCTATGAATAATTTGATGCCATGACCAAGGATATGATTCTATTGCTGTTTTCTTGTCTGTGCTTGTTAAGGGCGTAAGGCACATAGCCTCCTATCAATGTTTTATGCGATCGTCGATACTTTTTTTTTTCCACGTTTTGAATTTTTTTTACTGCACTTGTGTTTTAGGATCTGAACCAATAAATGCATATCCGACTAATGTTAAAATCTCTCTGATTGTTTTTCAGTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGTGCGTACATATCTTTTGCACATATTAAGTGCTTATTGTAACAATCTAATGCTTCAACATGCAGTTGCACAGTAACATTCAGAGAGTATGTCATATCTATGCAAGTGCTGATTAAAATTATGTTTTTGGACAGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATATGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCAGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGTAAATATACAACAGTCAAAATTTTTTCACATCCAAGTACGATTGCTATCTCAAGTTCCAATATGTCTTATCAGACTGTTTACAGTAAAGATGTTTCCTAGCCAAGGAATTGTTATGTCTTGGGTCATGCTATATTTTAAAGTTCTCCTTTGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGGTAACCAGGATATTGCATATACCCCTTGCATCTGGGGGCTTTGTTTTTCCACACACATCACCATAATATGCCAATGTCTTTGTATAATCTGCTCCATTCTCATGCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGCGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACAGTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACAATGAGCACCCCAATCAAGGACAGAGTTGATAATGTAGGGCTTTACGACCTGACAGACTTGCTTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009522