BGIOSGA009524

From RiceWiki
Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009524| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009524, complete gene.| tag = OJ1111_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009524

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009524, complete gene.

LocusTag

OJ1111_B11.6

Ensembl Transcript ID

BGIOSGA009524-TA

Ensembl Protein ID

BGIOSGA009524-PA

Length

677

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39088422..39089098

Sequence Coding Region

39089044..39089098,39088698..39088956,39088422..39088539

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39088422..39089098 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39088422..39089098 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGCCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGGCAAGGCGCAGAGCTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACACATGA</cdnaseq>

Protein Sequence

<aaseq>MGSLMAGWDSPVLGDENRVLARRNKSLTREEVEAFWKQHGGEMMSGSPLGSPAAAGMARSAPVSRSKAHASSPRGGRIDPATRVEGFFPHDDAAAAESPSKSHDWWTRSNWAFLNEPPQEEIAGKAQSYAPQFHVARIATGNT</aaseq>

Gene Sequence

<dnaseqindica>1..55#143..401#560..677#ATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGGTACGTAGTTTTCATTTACGTACCTGCAGATGTGTGTCAATCCATGCATGATTTGCTCATGACTTTGATTTTTGGATATATGTGTAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGCCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTACGCACAACAGTAGTATCTATATACTACTTCCCTCTTAAAATATAATATTTTTTTCTATAAATTTAAACTCACAGTTGTCTAAATTTAAATTAGAAATGCTTATATTTTGAGTTTTTTATGAGAATTCATGAACTGATGATGTGATGGATGGATAGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGGCAAGGCGCAGAGCTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009524